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MN994275.1__QIA28863.1__X__00070
Bact-VirMN994275.1__QIA28863.1__X__00070
Identity
- Accession:
- MN994275 ↗
- Kingdom:
- phage
Quality
86.4
mean pLDDT
Taxonomy
TaxID: 2708562
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 49-134
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2p5zX01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.72 | 48.0 | 3.82e-01 | 98.8% | 34.9% |
| 3drxB03 | 3.30.70.2000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 38.0 | 4.76e-01 | 100.0% | 94.1% |
| 3bb5A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 47.0 | 4.44e-01 | 100.0% | 62.1% |
| 4lbhA00 | 3.30.70.1060 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel | 0.66 | 45.0 | 4.43e-01 | 100.0% | 64.9% |
| 2vxaA00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.64 | 42.0 | 4.68e-01 | 100.0% | 87.9% |
| 5ejlA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.63 | 46.0 | 4.05e-01 | 100.0% | 53.2% |
| 3eaaA00 | 2.30.110.20 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like | 0.63 | 51.0 | 4.18e-01 | 100.0% | 47.5% |
| 2oq5A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.62 | 43.0 | 4.10e-01 | 100.0% | 59.6% |
| 3jwhA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 47.0 | 3.62e-01 | 100.0% | 36.1% |
| 7pzoA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 42.0 | 4.12e-01 | 100.0% | 64.6% |
| 2aiqA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 42.0 | 3.89e-01 | 100.0% | 54.9% |
| 3tvjB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.61 | 44.0 | 4.11e-01 | 100.0% | 61.7% |
| 3b49A00 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.60 | 44.0 | 3.34e-01 | 98.8% | 32.4% |
| 4z9eA00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.59 | 41.0 | 4.12e-01 | 97.7% | 71.8% |
| 5uejA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 50.0 | 4.53e-01 | 100.0% | 69.3% |
| 4h4fA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 42.0 | 3.89e-01 | 100.0% | 58.2% |
| 4hudA01 | 3.30.2000.40 | Alpha Beta › 2-Layer Sandwich › STM4215-like › Myoviridae tail sheath stabiliser | 0.59 | 49.0 | 3.68e-01 | 100.0% | 37.1% |
| 6mv4H02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.59 | 43.0 | 3.97e-01 | 100.0% | 60.2% |
| 3tx8A02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 50.0 | 4.57e-01 | 100.0% | 70.2% |
| 5koxA02 | 3.30.70.2450 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 34.0 | 3.48e-01 | 100.0% | 57.0% |
| 6wl5A01 | 3.20.80.10 | Alpha Beta › Alpha-Beta Barrel › Multidrug-efflux Transporter 1 Regulator Bmrr; Chain A › Regulatory factor, effector binding domain | 0.58 | 40.0 | 3.35e-01 | 96.5% | 40.9% |
| 2ychA02 | 3.30.1490.300 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.58 | 39.0 | 4.46e-01 | 98.8% | 100.0% |
| 6ruiB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.58 | 52.0 | 4.60e-01 | 100.0% | 82.5% |
| 3pfeA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 51.0 | 4.46e-01 | 100.0% | 71.5% |
| 2pokA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.56 | 50.0 | 4.03e-01 | 100.0% | 78.2% |
| 2pt7G02 | 3.30.1370.180 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.56 | 31.0 | 3.41e-01 | 97.7% | 65.7% |
| 3ue2A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.55 | 40.0 | 3.97e-01 | 100.0% | 72.7% |
| 2y8yA02 | 3.30.70.1210 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Crispr-associated protein; domain 2 | 0.54 | 44.0 | 3.99e-01 | 100.0% | 66.1% |
| 6r2wH02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 39.0 | 3.67e-01 | 98.8% | 60.9% |
| 7d58G01 | 3.30.1490.120 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain | 0.54 | 42.0 | 4.44e-01 | 100.0% | 97.3% |
| 3lifA02 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.53 | 42.0 | 4.22e-01 | 100.0% | 81.1% |
| 5t0oA03 | 3.30.70.1320 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Multidrug efflux transporter AcrB pore domain like | 0.53 | 39.0 | 3.79e-01 | 100.0% | 68.3% |
| 1jeyA02 | 2.40.290.10 | Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › | 0.53 | 42.0 | 3.81e-01 | 100.0% | 61.1% |
| 5k8mA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 46.0 | 4.06e-01 | 100.0% | 71.8% |
| 3mxlA02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.51 | 38.0 | 3.66e-01 | 100.0% | 68.3% |
| 1qz8A01 | 2.40.10.250 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 | 0.50 | 32.0 | 3.06e-01 | 100.0% | 51.4% |
| 2ix5A02 | 2.40.110.10 | Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 | 0.50 | 37.0 | 3.51e-01 | 100.0% | 63.6% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3980535 | 1.1.13.51 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU | 0.87 | 70.0 | 5.96e-01 | 100.0% | 54.8% |
| 3944239 | 1.1.13.51 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU | 0.81 | 66.0 | 6.13e-01 | 100.0% | 70.5% |
| 4059301 | 1.1.13.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like | 0.79 | 68.0 | 6.24e-01 | 100.0% | 71.8% |
| 3981654 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.78 | 56.0 | 5.11e-01 | 100.0% | 58.2% |
| 5004559 | 1.1.13.75 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › CIS_tube | 0.77 | 69.0 | 5.82e-01 | 100.0% | 61.5% |
| 4063137 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.72 | 44.0 | 4.38e-01 | 100.0% | 58.9% |
| 4952429 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 50.0 | 4.77e-01 | 100.0% | 69.0% |
| 5082575 | 304.109.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e | 0.65 | 45.0 | 4.65e-01 | 100.0% | 77.5% |
| 3789742 | 304.9.1.42 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRP7 | 0.64 | 42.0 | 3.05e-01 | 100.0% | 23.7% |
| 3628117 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.64 | 42.0 | 3.23e-01 | 100.0% | 30.5% |
| 4957560 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.63 | 49.0 | 4.27e-01 | 100.0% | 55.4% |
| 4140824 | 304.4.1.3 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › YCII | 0.63 | 45.0 | 4.22e-01 | 100.0% | 61.5% |
| 3967199 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 44.0 | 4.17e-01 | 100.0% | 61.0% |
| 5052888 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 44.0 | 3.99e-01 | 100.0% | 52.0% |
| 4401956 | 304.25.1.0 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain | 0.62 | 44.0 | 4.29e-01 | 100.0% | 67.4% |
| 5040464 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 41.0 | 4.00e-01 | 100.0% | 61.1% |
| 3591908 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.62 | 55.0 | 4.29e-01 | 100.0% | 46.7% |
| 5012991 | 1.1.9.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 | 0.61 | 50.0 | 4.46e-01 | 100.0% | 62.5% |
| 4563127 | 310.3.1.3 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › PilN | 0.61 | 38.0 | 3.59e-01 | 100.0% | 50.5% |
| 3402456 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.61 | 41.0 | 3.18e-01 | 100.0% | 30.8% |
| 2074267 | 1.1.5.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › T6SS_HCP | 0.60 | 53.0 | 4.30e-01 | 100.0% | 51.9% |
| 4273561 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.60 | 41.0 | 3.57e-01 | 100.0% | 45.2% |
| 3981111 | 1.1.7.89 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 | 0.60 | 43.0 | 3.58e-01 | 100.0% | 42.6% |
| 5069899 | 1.1.9.23 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF473 | 0.59 | 48.0 | 4.24e-01 | 100.0% | 61.7% |
| 3588088 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.59 | 51.0 | 3.79e-01 | 100.0% | 47.1% |
| 3973282 | 1.1.7.89 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF26002 | 0.58 | 43.0 | 4.05e-01 | 100.0% | 62.7% |
| 4991896 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.58 | 41.0 | 4.14e-01 | 98.8% | 72.7% |
| 4441129 | 1.1.7.91 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25940 | 0.58 | 41.0 | 3.72e-01 | 100.0% | 53.3% |
| 3279708 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.58 | 50.0 | 4.50e-01 | 100.0% | 69.6% |
| 5022426 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.57 | 49.0 | 4.39e-01 | 100.0% | 67.5% |
| 4888780 | 304.124.1.5 ↗ | a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › T4-gp15_tss | 0.57 | 49.0 | 3.61e-01 | 100.0% | 35.0% |
| 4962530 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.57 | 48.0 | 4.53e-01 | 100.0% | 76.2% |
| 1510566 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.56 | 50.0 | 4.03e-01 | 100.0% | 78.2% |
| 4027705 | 1.1.7.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Aquarius_N_2nd | 0.56 | 51.0 | 4.25e-01 | 100.0% | 64.8% |
| 5038472 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.56 | 42.0 | 3.92e-01 | 100.0% | 63.6% |
| 3255716 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 38.0 | 3.56e-01 | 100.0% | 57.1% |
| 3213566 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.55 | 45.0 | 3.07e-01 | 100.0% | 23.9% |
| 4977974 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.54 | 49.0 | 4.26e-01 | 100.0% | 70.0% |
| 4956789 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.54 | 48.0 | 4.19e-01 | 100.0% | 67.4% |
| 4968745 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.54 | 42.0 | 4.46e-01 | 98.8% | 96.0% |
| 3946833 | 1.1.16.2 ↗ | beta barrels › cradle loop barrel › RIFT-related › Mammalian cell entry (MCE) domain › Phage_GPO | 0.53 | 46.0 | 4.04e-01 | 100.0% | 63.7% |
| 4286263 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.53 | 47.0 | 4.11e-01 | 100.0% | 72.3% |
| 4936151 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.52 | 40.0 | 3.37e-01 | 84.9% | 66.9% |
| 3805842 | 304.112.1.3 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain › ArgoN | 0.51 | 34.0 | 3.46e-01 | 100.0% | 68.2% |
| 3602774 | 304.51.1.8 ↗ | a+b two layers › Alpha-beta plaits › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › CRISPR transcript (pre-crRNA) processing endoribonuclease-related › Cas6b_C | 0.50 | 42.0 | 3.90e-01 | 100.0% | 71.3% |
| 4455935 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.50 | 44.0 | 3.30e-01 | 100.0% | 39.1% |
| 3637819 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.50 | 40.0 | 3.68e-01 | 100.0% | 65.8% |
| 5024914 | 872.1.1.1 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like › SHS2_Rpb7-N | 0.50 | 43.0 | 4.35e-01 | 100.0% | 98.8% |