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MN996301.1__QMP18250.1__RpY1_038__00038

Bact-Vir

MN996301.1__QMP18250.1__RpY1_038__00038

Identity

Accession:
MN996301 ↗
Kingdom:
phage

Quality

88.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Ralstonia_phage_RpY1

TaxID: 2759121

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-58
PDB
Domain cluster: representative
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3f7pD01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 48.0 4.10e-01 89.3% 59.3%
1x5lA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 45.0 3.95e-01 89.3% 61.4%
7ox5A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 45.0 3.73e-01 89.3% 67.0%
4n68A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 45.0 3.78e-01 89.3% 56.6%
4akmB00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.56 39.0 2.80e-01 73.2% 85.4%
7ejoB01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.55 43.0 3.84e-01 87.5% 86.7%
6iikB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.53 44.0 2.79e-01 96.4% 32.9%
1x5kA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 42.0 3.50e-01 89.3% 56.4%
3up6A02 2.60.40.3380 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 40.0 3.12e-01 98.2% 63.5%
ECOD (6)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5038621 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.62 51.0 3.89e-01 89.3% 43.2%
3802592 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.59 50.0 3.93e-01 94.6% 72.5%
3405163 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.58 46.0 3.80e-01 89.3% 53.3%
3676255 7572.1.1.0 ↗ a/b three-layered sandwiches › Phosphofructokinase C-terminal domain › Phosphofructokinase C-terminal domain › Phosphofructokinase C-terminal domain 0.57 40.0 3.52e-01 78.6% 76.8%
3483429 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 45.0 3.35e-01 87.5% 65.7%
3533844 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.55 43.0 3.64e-01 89.3% 57.0%