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MT002875.2__QIG62461.1__X__00003

Bact-Vir

MT002875.2__QIG62461.1__X__00003

Identity

Accession:
MT002875 ↗
Kingdom:
phage

Quality

74.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudoalteromonas_phage_AL

TaxID: 2712933

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 60-110
PDB
Domain cluster: rep: MK249872.1__AZU97906.1__X__00033__D55-103
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3r2qA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.68 42.0 3.24e-01 70.6% 28.3%
2x1dA02 1.10.10.2120 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.67 49.0 4.48e-01 100.0% 56.8%
1kblA05 1.20.80.30 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.66 54.0 4.67e-01 100.0% 61.8%
2kilA00 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.66 54.0 3.82e-01 100.0% 27.6%
2qgsB01 1.10.472.50 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like 0.65 56.0 4.75e-01 100.0% 95.5%
3r0qA02 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.63 43.0 2.81e-01 74.5% 17.8%
2rn7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 41.0 3.89e-01 76.5% 56.1%
1m2oA04 1.20.120.730 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Sec23/Sec24 helical domain 0.60 42.0 3.21e-01 90.2% 29.2%
2g8lA02 1.10.285.20 Mainly Alpha › Orthogonal Bundle › Glutamate Dehydrogenase; Chain A, domain 3 › Uncharacterised protein PF01937, DUF89, domain 2 0.60 46.0 4.39e-01 100.0% 72.3%
4f03B02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.59 40.0 2.97e-01 72.5% 60.7%
1e7lA02 1.10.720.10 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › 0.59 38.0 3.78e-01 100.0% 60.0%
3a8pA02 6.10.140.680 Special › Helix non-globular › Helix Hairpins › 0.59 40.0 3.08e-01 70.6% 45.6%
2z3xA00 6.10.10.80 Special › Helix non-globular › Helicase, Ruva Protein; domain 3 › Small, acid-soluble spore protein, alpha/beta type-like 0.57 43.0 4.28e-01 90.2% 80.4%
1lvfB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 38.0 3.04e-01 72.5% 65.4%
6ocxA00 1.10.238.10 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand 0.54 43.0 3.14e-01 94.1% 38.4%
4h63H01 1.20.58.1710 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.54 36.0 3.31e-01 72.5% 50.0%
7wu8B01 1.20.1160.20 Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › 0.51 43.0 3.79e-01 98.0% 94.9%
3ckdA02 1.20.58.360 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines 0.51 43.0 3.34e-01 100.0% 56.5%
3h4cA02 1.10.472.110 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › 0.51 44.0 3.48e-01 100.0% 50.0%
1gyzA00 1.10.1900.20 Mainly Alpha › Orthogonal Bundle › c-terminal domain of poly(a) binding protein › Ribosomal protein L20, C-terminal domain 0.50 42.0 4.03e-01 100.0% 85.0%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3589701 632.24.1.3 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › GBS CAMP factor C-terminal domain › GBS CAMP factor C-terminal domain › ORF6C 0.78 66.0 5.69e-01 100.0% 76.5%
3659870 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.63 53.0 4.52e-01 96.1% 65.9%