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MT002975.1__QIC52880.1__X__00028

Bact-Vir

MT002975.1__QIC52880.1__X__00028

Identity

Accession:
MT002975 ↗
Kingdom:
phage

Quality

71.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Perisivirus› Brucella_phage_EF4

TaxID: 2706778

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-80_98-111
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
7mjrA03 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.59 43.0 3.86e-01 75.5% 77.9%
2pn5A01 2.60.40.2950 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 42.0 4.26e-01 85.1% 76.3%
3cjiA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.57 44.0 3.32e-01 86.2% 77.1%
3fn9A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 43.0 4.05e-01 86.2% 71.7%
4mtmA01 2.60.40.3940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 38.0 3.86e-01 73.4% 72.9%
4a5wA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 42.0 4.10e-01 84.0% 81.0%
2yc2A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.54 41.0 3.76e-01 84.0% 70.5%
4geiA00 2.60.40.640 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 40.0 3.61e-01 85.1% 78.5%
5z9sA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 41.0 3.80e-01 85.1% 78.0%
4ag4A02 2.60.120.1190 Mainly Beta › Sandwich › Jelly Rolls › 0.52 45.0 3.69e-01 97.9% 92.3%
4iykA02 2.60.40.2060 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 39.0 3.67e-01 81.9% 78.8%
1wkiA01 3.90.1170.10 Alpha Beta › Alpha-Beta Complex › Aldehyde Oxidoreductase; domain 3 › Ribosomal protein L16/L10 0.51 36.0 3.44e-01 72.3% 89.9%
2e56A00 2.60.40.770 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 41.0 3.61e-01 88.3% 79.9%
4ypjA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 42.0 3.93e-01 93.6% 76.5%
2nncA00 2.60.40.2470 Mainly Beta › Sandwich › Immunoglobulin-like › SoxY domain 0.51 35.0 3.36e-01 86.2% 60.9%
5tf0B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 38.0 3.63e-01 80.9% 80.2%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3207948 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.59 45.0 3.58e-01 81.9% 77.0%
4928967 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 43.0 3.85e-01 83.0% 81.3%
4950703 11.4.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Antigen MPT63/MPB63 (immunoprotective extracellular protein) › Antigen MPT63/MPB63 (immunoprotective extracellular protein) 0.56 41.0 3.59e-01 77.7% 76.7%
3191945 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 44.0 3.78e-01 87.2% 81.3%
3974305 10.20.1.2 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease › Bact_transglu_N 0.54 38.0 3.50e-01 87.2% 56.7%
1946 11.13.1.3 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Leukocidin-like › Leukocidin-like › MspA 0.53 41.0 3.44e-01 88.3% 77.2%
3203691 11.1.1.667 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRAPPC13_N 0.51 42.0 3.68e-01 95.7% 81.9%
3689981 511.1.1.2 ↗ beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › PF27034 0.50 36.0 3.13e-01 75.5% 99.4%