←Back to structures

MT002975.1__QIC52881.1__X__00027

Bact-Vir

MT002975.1__QIC52881.1__X__00027

Identity

Accession:
MT002975 ↗
Kingdom:
phage

Quality

82.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Perisivirus› Brucella_phage_EF4

TaxID: 2706778

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 47-164
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4kcaA02 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.66 59.0 4.13e-01 100.0% 51.1%
8axiA01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.66 60.0 4.23e-01 100.0% 36.8%
2qe8A00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.66 61.0 4.31e-01 100.0% 42.4%
1v0fA02 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.64 58.0 4.09e-01 100.0% 55.7%
3iujA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.63 57.0 4.12e-01 100.0% 49.1%
2bklA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.63 57.0 4.09e-01 100.0% 49.7%
2vpjA00 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.62 57.0 4.26e-01 100.0% 42.9%
1e5tA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.62 56.0 3.96e-01 100.0% 37.7%
1x2jA00 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.61 56.0 4.19e-01 100.0% 42.8%
2b4wA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.61 55.0 4.12e-01 99.2% 60.8%
5mqrA01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.61 55.0 3.83e-01 100.0% 35.5%
3ii7A00 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.61 55.0 4.15e-01 100.0% 44.1%
1inyA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.60 54.0 3.79e-01 100.0% 32.7%
1b9vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.60 55.0 3.77e-01 100.0% 34.1%
3nqzA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 40.0 4.57e-01 81.4% 97.6%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.59 24.0 3.70e-01 94.1% 97.8%
3c5mA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 52.0 3.67e-01 99.2% 44.7%
3fh1A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 42.0 4.21e-01 82.2% 100.0%
1twfI02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.52 27.0 3.34e-01 70.3% 77.6%
2jq5A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 41.0 4.04e-01 86.4% 98.4%
3dghA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 38.0 3.79e-01 80.5% 95.9%
4ebgA00 3.10.450.560 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 36.0 3.92e-01 91.5% 91.8%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4946507 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.69 42.0 5.11e-01 78.8% 94.7%
3935235 5.1.3.117 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 0.68 58.0 4.27e-01 100.0% 35.7%
5063704 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.66 37.0 4.81e-01 78.8% 100.0%
3831607 5.1.3.23 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL 0.65 60.0 4.36e-01 100.0% 53.7%
3376278 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.65 60.0 4.33e-01 100.0% 58.1%
3965967 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.65 38.0 4.11e-01 79.7% 68.0%
3994385 5.1.3.116 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7 0.65 60.0 4.15e-01 100.0% 45.1%
5039064 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 60.0 4.10e-01 100.0% 43.6%
3572222 5.1.3.135 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 0.64 58.0 4.08e-01 100.0% 38.4%
3274859 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.64 59.0 3.96e-01 100.0% 54.0%
4936581 331.10.2.0 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.64 36.0 4.19e-01 76.3% 76.5%
3643489 5.1.3.135 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 0.64 59.0 4.20e-01 100.0% 58.8%
3722465 5.1.5.54 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_NOL10_N 0.64 59.0 4.01e-01 100.0% 30.8%
3196185 5.1.5.76 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40, Beta-prop_NOL10_N 0.64 59.0 4.02e-01 100.0% 31.1%
None — 0.63 58.0 4.02e-01 100.0% 47.1%
3575714 5.1.4.329 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30693 0.63 58.0 3.97e-01 100.0% 33.7%
3853086 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.63 53.0 3.82e-01 100.0% 31.1%
3827251 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.63 57.0 4.09e-01 100.0% 37.1%
3484665 5.1.3.7 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL 0.63 57.0 4.04e-01 100.0% 46.1%
3576412 5.1.4.12 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.62 56.0 4.14e-01 100.0% 79.7%
3385818 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.62 57.0 4.30e-01 99.2% 63.4%
3743052 5.1.4.78 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TFIIIC_delta 0.62 56.0 3.76e-01 100.0% 42.0%
3623313 5.1.3.7 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › NHL 0.62 56.0 3.99e-01 98.3% 53.7%
3359029 5.1.4.259 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, WD40_CDC20-Fz 0.62 57.0 4.30e-01 100.0% 52.6%
5014318 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.62 38.0 4.66e-01 91.5% 98.7%
3817220 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.62 56.0 4.14e-01 100.0% 41.6%
3445416 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.62 54.0 3.88e-01 98.3% 64.7%
4879141 5.1.3.3 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neur 0.61 55.0 3.86e-01 100.0% 58.3%
3821607 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.61 56.0 3.96e-01 100.0% 36.2%
5061559 5.1.4.235 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_1st 0.60 55.0 3.96e-01 100.0% 45.7%
3891571 5.1.7.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 10-bladed › Sortilin-Vps10 0.60 53.0 3.61e-01 100.0% 26.7%
3804813 5.1.3.65 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.60 53.0 3.96e-01 100.0% 38.6%
3917456 5.1.5.93 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_EMC1_N 0.60 52.0 3.61e-01 100.0% 27.1%
3937921 5.1.3.170 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_IFT140_2nd 0.60 54.0 3.91e-01 100.0% 49.7%
3814019 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.59 54.0 3.81e-01 100.0% 37.5%
4025057 5.1.4.284 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, ANAPC4_WD40, EIF3I 0.59 53.0 3.90e-01 100.0% 51.4%
4207211 511.1.1.1 ↗ beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 0.59 42.0 3.85e-01 73.7% 72.9%
3928054 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.59 53.0 4.11e-01 100.0% 47.2%
3246345 5.1.4.341 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_2nd 0.59 52.0 3.84e-01 96.6% 64.9%
3415926 708.1.1.4 ↗ beta complex topology › ETN0001 domain-like › ETN0001 domain-like › NAC/WRKY/GCM/WOPR domain › FLYWCH 0.59 31.0 3.88e-01 86.4% 85.7%
3549654 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.58 53.0 3.03e-01 100.0% 15.9%
3896806 5.1.4.341 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_2nd 0.58 51.0 3.35e-01 98.3% 45.0%
3844573 5.1.3.170 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_IFT140_2nd 0.57 51.0 3.70e-01 100.0% 59.7%
3823661 5.1.5.96 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_3 0.57 51.0 3.85e-01 100.0% 51.5%
3826459 5.1.5.96 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_3 0.57 51.0 3.95e-01 100.0% 50.2%
5055108 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.56 51.0 3.79e-01 100.0% 48.9%
3778085 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 49.0 3.37e-01 100.0% 28.3%
3363058 5.1.8.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 0.54 48.0 3.93e-01 100.0% 61.8%
2549179 243.19.1.0 ↗ a+b two layers › Cystatin-like › Phi ETA orf 56-like protein C-terminal domains › Phi ETA orf 56-like protein C-terminal domains 0.53 39.0 4.30e-01 88.1% 98.9%
3404947 5.1.4.341 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT140_2nd 0.53 47.0 3.50e-01 100.0% 39.0%