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MT006234.1__QIG78034.1__BRUR0010001c01_00003__00003
Bact-VirMT006234.1__QIG78034.1__BRUR0010001c01_00003__00003
Identity
- Accession:
- MT006234 ↗
- Kingdom:
- phage
Quality
92.1
mean pLDDT
Taxonomy
TaxID: 2713249
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-98
Domain cluster:
representative
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.73 | 60.0 | 4.90e-01 | 94.8% | 48.6% |
| 1wthD01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.71 | 65.0 | 6.28e-01 | 100.0% | 93.4% |
| 6zlvA01 | 2.40.10.350 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 | 0.71 | 53.0 | 5.86e-01 | 94.8% | 98.7% |
| 3cddA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.69 | 60.0 | 4.80e-01 | 94.8% | 50.0% |
| 2o8lA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.68 | 56.0 | 5.51e-01 | 97.9% | 83.2% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.68 | 55.0 | 5.13e-01 | 96.9% | 70.9% |
| 3fgeA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.67 | 59.0 | 4.88e-01 | 96.9% | 73.8% |
| 2as9A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.67 | 54.0 | 5.46e-01 | 96.9% | 86.2% |
| 2nwaA01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.66 | 45.0 | 4.95e-01 | 93.8% | 89.3% |
| 2ecuA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.65 | 58.0 | 4.98e-01 | 96.9% | 73.8% |
| 3d37B01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.65 | 56.0 | 4.59e-01 | 93.8% | 54.0% |
| 1uscA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.65 | 57.0 | 4.65e-01 | 96.9% | 67.4% |
| 2p5zX01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.65 | 53.0 | 4.43e-01 | 92.7% | 51.2% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.65 | 53.0 | 5.35e-01 | 88.5% | 96.8% |
| 2kz4A00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.65 | 60.0 | 5.66e-01 | 100.0% | 93.8% |
| 2r6vA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 56.0 | 4.72e-01 | 96.9% | 74.4% |
| 3nfwA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.64 | 56.0 | 4.58e-01 | 96.9% | 65.9% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.63 | 52.0 | 4.83e-01 | 90.6% | 74.4% |
| 3lnnA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.62 | 46.0 | 4.72e-01 | 82.3% | 81.7% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 41.0 | 4.36e-01 | 79.2% | 80.2% |
| 2xzmP00 | 3.30.70.3370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 47.0 | 4.09e-01 | 84.4% | 56.8% |
| 4b3fX02 | 2.40.30.270 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.59 | 46.0 | 4.62e-01 | 93.8% | 81.6% |
| 6ya6A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 39.0 | 3.96e-01 | 77.1% | 70.4% |
| 3h7lA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 40.0 | 4.05e-01 | 80.2% | 76.3% |
| 4ic6C01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 44.0 | 4.28e-01 | 95.8% | 77.3% |
| 4mypA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.55 | 41.0 | 3.87e-01 | 96.9% | 63.6% |
| 2iteA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 41.0 | 3.87e-01 | 96.9% | 64.5% |
| 3sz6A00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 41.0 | 3.90e-01 | 96.9% | 66.4% |
| 1ie0A00 | 3.30.1360.80 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS) | 0.54 | 40.0 | 3.39e-01 | 78.1% | 50.6% |
| 4liqE05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 39.0 | 3.91e-01 | 78.1% | 74.0% |
| 4xchA00 | 3.30.1360.80 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS) | 0.53 | 39.0 | 3.38e-01 | 78.1% | 49.7% |
| 1e62A01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.53 | 44.0 | 4.02e-01 | 91.7% | 70.3% |
| 5gxuB01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 37.0 | 3.47e-01 | 92.7% | 59.8% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4031285 | 1.1.13.64 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › TT1_Tal | 0.77 | 67.0 | 6.88e-01 | 96.9% | 100.0% |
| 3589736 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.75 | 50.0 | 5.70e-01 | 71.9% | 92.9% |
| 184486 | 1.1.13.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st | 0.75 | 57.0 | 6.14e-01 | 94.8% | 96.3% |
| 3604610 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.74 | 49.0 | 5.80e-01 | 75.0% | 100.0% |
| 5041372 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 61.0 | 6.29e-01 | 93.8% | 95.6% |
| 2468519 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 63.0 | 6.20e-01 | 93.8% | 98.0% |
| 184471 | 1.1.13.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st | 0.73 | 60.0 | 6.27e-01 | 94.8% | 98.8% |
| 4889788 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.73 | 63.0 | 6.29e-01 | 93.8% | 96.9% |
| 2475124 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 62.0 | 6.32e-01 | 93.8% | 100.0% |
| 4141852 | 1.1.13.56 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › YQBQ | 0.72 | 59.0 | 6.27e-01 | 94.8% | 100.0% |
| 3059162 | 1.1.13.30 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › E217_GP41 | 0.72 | 64.0 | 5.90e-01 | 99.0% | 96.8% |
| 4810019 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.71 | 62.0 | 5.91e-01 | 94.8% | 90.0% |
| 3943172 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.71 | 64.0 | 6.34e-01 | 100.0% | 99.0% |
| 4988103 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.70 | 61.0 | 6.17e-01 | 94.8% | 96.8% |
| 3590201 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 63.0 | 6.03e-01 | 96.9% | 94.4% |
| 4032900 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 62.0 | 6.02e-01 | 95.8% | 98.1% |
| 4995815 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 62.0 | 5.67e-01 | 99.0% | 78.4% |
| 1178487 | 1.1.13.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › GpP-like_1st | 0.69 | 60.0 | 6.05e-01 | 94.8% | 95.8% |
| 3404225 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.69 | 50.0 | 3.90e-01 | 95.8% | 35.2% |
| 3968713 | 1.1.13.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_GPD | 0.68 | 56.0 | 5.78e-01 | 95.8% | 96.7% |
| 3982237 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 51.0 | 5.44e-01 | 81.2% | 100.0% |
| 3741921 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.67 | 55.0 | 5.36e-01 | 87.5% | 81.9% |
| 4809346 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.66 | 51.0 | 5.40e-01 | 83.3% | 100.0% |
| 5049721 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.66 | 58.0 | 5.30e-01 | 97.9% | 80.8% |
| 5009313 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.65 | 41.0 | 4.45e-01 | 92.7% | 76.2% |
| 4682340 | 325.1.7.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › RNA_pol_Rpb2_6 | 0.65 | 45.0 | 4.08e-01 | 70.8% | 99.2% |
| 4344991 | 1.1.5.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › YwpF | 0.64 | 55.0 | 5.05e-01 | 96.9% | 74.6% |
| 4988102 | 1.1.13.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like | 0.63 | 55.0 | 5.27e-01 | 95.8% | 98.2% |
| 4943219 | 205.1.1.123 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer2_BFD | 0.62 | 43.0 | 3.71e-01 | 78.1% | 44.5% |
| 5049368 | 205.1.1.1 ↗ | a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4 | 0.62 | 44.0 | 3.83e-01 | 78.1% | 47.3% |
| 3744808 | 1.1.5.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx | 0.62 | 56.0 | 4.52e-01 | 100.0% | 88.6% |
| 1560729 | 1.1.5.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › YwpF | 0.62 | 55.0 | 4.84e-01 | 100.0% | 95.1% |
| 5064178 | 1.1.13.73 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PUA | 0.62 | 38.0 | 4.66e-01 | 70.8% | 100.0% |
| 1883205 | 1.1.13.19 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Caud_tail_N | 0.62 | 54.0 | 5.13e-01 | 94.8% | 93.6% |
| 4003172 | 1.1.5.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin | 0.61 | 53.0 | 4.20e-01 | 94.8% | 47.7% |
| 3578278 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.61 | 36.0 | 4.28e-01 | 79.2% | 87.7% |
| 3574784 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 49.0 | 4.69e-01 | 87.5% | 76.4% |
| 4461109 | 11.1.1.48 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CelD_N | 0.60 | 37.0 | 3.86e-01 | 79.2% | 66.7% |
| 3437290 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.59 | 49.0 | 3.82e-01 | 95.8% | 41.4% |
| 5019852 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.58 | 50.0 | 3.93e-01 | 95.8% | 91.4% |
| 4955094 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 35.0 | 3.39e-01 | 80.2% | 51.8% |
| 3449841 | 310.3.1.14 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › DUF7049 | 0.57 | 44.0 | 4.47e-01 | 81.2% | 96.8% |
| 3660389 | 304.109.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ribosomal proteins S24e, L23 and L15e › Ribosomal proteins S24e, L23 and L15e | 0.57 | 37.0 | 4.31e-01 | 78.1% | 98.5% |
| 4983236 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.56 | 40.0 | 2.97e-01 | 76.0% | 63.0% |
| 5033989 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 32.0 | 3.92e-01 | 78.1% | 98.2% |
| 4246888 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.55 | 40.0 | 3.00e-01 | 75.0% | 46.0% |
| 5031541 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 34.0 | 3.47e-01 | 79.2% | 63.2% |
| 4069712 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.54 | 38.0 | 3.12e-01 | 76.0% | 68.0% |
| 4948136 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.54 | 38.0 | 2.96e-01 | 76.0% | 69.0% |
| 4305191 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.52 | 47.0 | 3.41e-01 | 100.0% | 86.0% |
| 3883938 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 38.0 | 3.69e-01 | 79.2% | 72.7% |
| 3719372 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.51 | 39.0 | 2.56e-01 | 80.2% | 40.2% |
| 4936296 | 304.102.1.3 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › PseudoU_synth_1 | 0.50 | 44.0 | 3.28e-01 | 100.0% | 86.0% |
D2
high
residues 100-189
Domain cluster:
rep: NC_047925.1__YP_009798321.1__HOS79_gp108__00101__D161-239
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3d37A02 | 3.55.50.10 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › Baseplate protein-like domains | 0.75 | 60.0 | 6.22e-01 | 100.0% | 91.8% |
| 3lxrF00 | 1.10.4120.20 | Mainly Alpha › Orthogonal Bundle › SopE-like GEF fold › | 0.59 | 44.0 | 3.59e-01 | 81.1% | 70.7% |
| 2xmoA01 | 3.60.21.10 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases | 0.58 | 44.0 | 3.05e-01 | 81.1% | 95.0% |
| 4k3bA02 | 3.10.20.310 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac | 0.53 | 37.0 | 3.81e-01 | 87.8% | 78.6% |
| 3e0jA01 | 3.60.21.50 | Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › | 0.52 | 39.0 | 2.79e-01 | 81.1% | 84.9% |
| 4rt5A00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 35.0 | 3.36e-01 | 100.0% | 61.4% |
| 2onfA01 | 3.30.300.20 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › K homology (KH) domain | 0.50 | 35.0 | 3.14e-01 | 73.3% | 73.1% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3966573 | 3070.1.1.2 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins › Phage_GPD | 0.72 | 59.0 | 5.95e-01 | 100.0% | 90.0% |
| 3972306 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.72 | 59.0 | 5.99e-01 | 100.0% | 91.1% |
| 3351840 | 284.1.3.2 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C | 0.62 | 35.0 | 3.97e-01 | 92.2% | 72.5% |
| 4033072 | 101.1.9.32 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › ANT | 0.60 | 33.0 | 3.38e-01 | 91.1% | 54.1% |
| 5072501 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.58 | 40.0 | 3.93e-01 | 72.2% | 99.0% |
| 5035757 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.54 | 38.0 | 3.67e-01 | 74.4% | 95.2% |
| 4541918 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.54 | 37.0 | 3.86e-01 | 86.7% | 80.0% |
| 4937870 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.54 | 37.0 | 3.69e-01 | 72.2% | 97.9% |
| 4930178 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.54 | 37.0 | 3.54e-01 | 72.2% | 95.5% |
| 3265408 | 2004.1.1.453 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1, NOG1 | 0.53 | 36.0 | 2.81e-01 | 98.9% | 33.5% |
| 5033074 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.53 | 36.0 | 3.47e-01 | 72.2% | 95.5% |
| 3839149 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.52 | 35.0 | 3.66e-01 | 87.8% | 74.1% |
| 5082425 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.52 | 36.0 | 3.56e-01 | 72.2% | 100.0% |
| 5079022 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.52 | 36.0 | 3.43e-01 | 72.2% | 91.8% |
| 5040415 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.52 | 37.0 | 3.56e-01 | 75.6% | 97.1% |
| 2547933 | 3121.1.1.1 ↗ | a+b duplicates or obligate multimers › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › Polypeptide transport-associated (POTRA) domain › POTRA | 0.52 | 36.0 | 3.76e-01 | 87.8% | 78.8% |
| 3755849 | 1036.1.1.1 ↗ | a+b two layers › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › 60S ribosomal export protein NMD3 a+b domain › NMD3 | 0.51 | 35.0 | 3.29e-01 | 72.2% | 80.9% |
| 3269591 | 11.8.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like | 0.51 | 35.0 | 3.30e-01 | 72.2% | 97.4% |
D3
high
residues 195-214_282-347
Domain cluster:
rep: IMGVR_UViG_3300009618_000029-3300009618-Ga0116127_100074338__D532-550_611-692
CATH (43)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.74 | 61.0 | 5.45e-01 | 98.8% | 65.0% |
| 2p5zX01 | 2.30.110.50 | Mainly Beta › Roll › Pnp Oxidase; Chain A › | 0.73 | 62.0 | 4.94e-01 | 100.0% | 47.6% |
| 1z85A01 | 2.40.240.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 | 0.72 | 49.0 | 5.44e-01 | 97.7% | 91.0% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.68 | 62.0 | 6.01e-01 | 100.0% | 93.7% |
| 2as9A02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.65 | 47.0 | 4.59e-01 | 97.7% | 70.2% |
| 4p02A03 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.64 | 54.0 | 4.87e-01 | 97.7% | 65.6% |
| 3iuwA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.64 | 52.0 | 5.39e-01 | 100.0% | 96.2% |
| 2o8lA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.62 | 49.0 | 4.73e-01 | 98.8% | 74.3% |
| 1shyA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.62 | 49.0 | 4.64e-01 | 100.0% | 72.5% |
| 2aneH00 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.61 | 55.0 | 5.08e-01 | 98.8% | 78.9% |
| 2x8kA01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.61 | 53.0 | 4.97e-01 | 98.8% | 83.8% |
| 6ctzA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 43.0 | 4.24e-01 | 91.9% | 71.0% |
| 5mmjh01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.58 | 39.0 | 4.19e-01 | 93.0% | 80.0% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.58 | 52.0 | 4.60e-01 | 100.0% | 71.2% |
| 4bfoA00 | 2.60.40.2440 | Mainly Beta › Sandwich › Immunoglobulin-like › Carbohydrate binding type-21 domain | 0.58 | 42.0 | 4.00e-01 | 89.5% | 64.2% |
| 3d4rB02 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.58 | 41.0 | 4.52e-01 | 74.4% | 98.5% |
| 6vbkA01 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.57 | 50.0 | 4.63e-01 | 100.0% | 79.3% |
| 3rgfA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 42.0 | 4.06e-01 | 87.2% | 69.8% |
| 2d9oA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 36.0 | 3.41e-01 | 79.1% | 54.0% |
| 2kvoA01 | 2.40.30.220 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Photosystem II Psb28 | 0.57 | 47.0 | 4.43e-01 | 100.0% | 76.0% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 41.0 | 4.14e-01 | 89.5% | 77.9% |
| 3hyiA01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.56 | 43.0 | 3.42e-01 | 100.0% | 38.2% |
| 6toaE01 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.56 | 48.0 | 4.65e-01 | 96.5% | 94.9% |
| 2if1A00 | 3.30.780.10 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain | 0.55 | 37.0 | 3.32e-01 | 89.5% | 46.8% |
| 3l4jA04 | 3.30.1360.40 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.55 | 38.0 | 3.67e-01 | 91.9% | 61.8% |
| 1blxA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 46.0 | 4.52e-01 | 91.9% | 87.0% |
| 3eniC00 | 2.50.10.10 | Mainly Beta › Clam › Bacteriochlorophyll-a Protein › Bacteriochlorophyll A | 0.55 | 44.0 | 2.99e-01 | 90.7% | 34.0% |
| 2j2jA00 | 2.60.90.10 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain | 0.54 | 44.0 | 3.58e-01 | 93.0% | 90.1% |
| 1wxrA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.54 | 47.0 | 3.44e-01 | 100.0% | 73.5% |
| 1r3eA01 | 3.30.2350.10 | Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › Pseudouridine synthase | 0.54 | 41.0 | 3.18e-01 | 86.0% | 57.5% |
| 2v9kA04 | 3.30.70.3190 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 38.0 | 3.55e-01 | 74.4% | 65.1% |
| 1jsxA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 37.0 | 2.83e-01 | 96.5% | 31.6% |
| 2pjdA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 43.0 | 3.59e-01 | 89.5% | 88.5% |
| 5w7tA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 42.0 | 4.04e-01 | 91.9% | 76.3% |
| 3ndiA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 43.0 | 3.24e-01 | 87.2% | 44.1% |
| 5heeA00 | 3.40.830.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like | 0.53 | 41.0 | 3.00e-01 | 87.2% | 96.9% |
| 1s2oA02 | 3.90.1070.10 | Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › | 0.51 | 36.0 | 3.88e-01 | 95.3% | 90.1% |
| 4rv9A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 41.0 | 3.17e-01 | 87.2% | 44.3% |
| 2jiiA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 42.0 | 3.90e-01 | 91.9% | 70.0% |
| 3b43A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 34.0 | 3.35e-01 | 89.5% | 61.9% |
| 2rsvA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.51 | 42.0 | 2.73e-01 | 91.9% | 22.1% |
| 2ktyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 42.0 | 3.68e-01 | 94.2% | 65.7% |
| 1i94H01 | 3.30.1370.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › | 0.50 | 39.0 | 4.12e-01 | 93.0% | 94.9% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4647050 | 1.1.13.56 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › YQBQ | 0.77 | 64.0 | 6.61e-01 | 100.0% | 95.0% |
| 4995816 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.75 | 70.0 | 6.74e-01 | 100.0% | 94.7% |
| 3511358 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.72 | 65.0 | 6.22e-01 | 100.0% | 97.0% |
| 5002662 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.70 | 64.0 | 6.07e-01 | 100.0% | 92.0% |
| 4608778 | 1.1.7.107 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › PF25965 | 0.70 | 55.0 | 4.94e-01 | 96.5% | 60.8% |
| 3980899 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.69 | 63.0 | 5.78e-01 | 100.0% | 87.3% |
| 5056905 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.69 | 49.0 | 4.90e-01 | 96.5% | 72.2% |
| 3289340 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 50.0 | 5.17e-01 | 95.3% | 82.5% |
| 4982501 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.68 | 48.0 | 4.69e-01 | 95.3% | 66.3% |
| 4260084 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.68 | 52.0 | 4.74e-01 | 98.8% | 60.0% |
| 3974181 | 1.1.5.88 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PF29489 | 0.68 | 53.0 | 5.24e-01 | 100.0% | 81.1% |
| 3603127 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.67 | 58.0 | 5.80e-01 | 100.0% | 93.3% |
| 3981654 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.66 | 59.0 | 5.49e-01 | 100.0% | 97.3% |
| 3941539 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.66 | 56.0 | 5.31e-01 | 94.2% | 97.1% |
| 3542585 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.64 | 58.0 | 4.13e-01 | 100.0% | 38.4% |
| 3741921 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.63 | 55.0 | 5.17e-01 | 98.8% | 79.0% |
| 5037092 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.63 | 45.0 | 4.85e-01 | 74.4% | 91.4% |
| 4656128 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.62 | 56.0 | 4.33e-01 | 100.0% | 69.5% |
| 3363680 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.62 | 51.0 | 4.75e-01 | 98.8% | 70.9% |
| 3555476 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.62 | 49.0 | 3.52e-01 | 100.0% | 29.6% |
| 5052022 | 1.1.5.10 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Flavin_Reduct | 0.61 | 54.0 | 4.48e-01 | 100.0% | 77.8% |
| 4587522 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.61 | 43.0 | 4.21e-01 | 97.7% | 67.4% |
| 3741028 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.61 | 52.0 | 4.90e-01 | 100.0% | 79.0% |
| 3535535 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.60 | 49.0 | 3.57e-01 | 100.0% | 31.4% |
| 3299946 | 1.1.7.81 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › SEN1_barrel | 0.60 | 51.0 | 4.66e-01 | 97.7% | 71.3% |
| 3890483 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.60 | 47.0 | 3.44e-01 | 97.7% | 30.2% |
| 3462034 | 1.1.7.55 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF6469 | 0.57 | 50.0 | 4.61e-01 | 98.8% | 80.9% |
| 4933784 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.57 | 42.0 | 3.21e-01 | 80.2% | 63.7% |
| 5063453 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.57 | 42.0 | 3.15e-01 | 81.4% | 56.3% |
| 4558386 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.56 | 44.0 | 3.37e-01 | 86.0% | 59.8% |
| 3592093 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.56 | 41.0 | 3.04e-01 | 80.2% | 56.9% |
| 4197562 | 304.102.1.6 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 | 0.56 | 43.0 | 3.23e-01 | 86.0% | 51.8% |
| 5047874 | 2003.1.5.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 | 0.56 | 41.0 | 3.18e-01 | 91.9% | 35.9% |
| 3972904 | 310.3.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related | 0.55 | 46.0 | 4.40e-01 | 94.2% | 78.0% |
| 3394788 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.55 | 49.0 | 3.58e-01 | 100.0% | 35.8% |
| 5001314 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.55 | 42.0 | 3.15e-01 | 86.0% | 38.0% |
| 3789001 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.54 | 47.0 | 2.74e-01 | 94.2% | 13.4% |
| 5042970 | 2003.1.5.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 | 0.54 | 39.0 | 3.06e-01 | 91.9% | 35.9% |
| 5011506 | 2003.1.5.55 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA | 0.54 | 37.0 | 2.90e-01 | 90.7% | 32.6% |
| 5001297 | 2003.1.5.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 | 0.53 | 38.0 | 3.02e-01 | 90.7% | 35.1% |
| 4503008 | 304.102.1.4 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N | 0.53 | 41.0 | 3.21e-01 | 84.9% | 53.5% |
| 3332978 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.53 | 34.0 | 2.51e-01 | 94.2% | 22.0% |
| 4029063 | 2003.1.5.5 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › UPF0020 | 0.52 | 38.0 | 2.82e-01 | 93.0% | 28.5% |
| 3859218 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.52 | 36.0 | 3.31e-01 | 76.7% | 52.5% |
| 3220081 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.52 | 39.0 | 2.90e-01 | 83.7% | 54.1% |
| 3461182 | 207.1.1.99 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_At5g56370 | 0.51 | 36.0 | 2.37e-01 | 91.9% | 16.4% |
| 4945745 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.51 | 38.0 | 2.89e-01 | 83.7% | 54.2% |
| 4103990 | 304.102.1.7 ↗ | a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › Pus10_C | 0.50 | 38.0 | 2.94e-01 | 84.9% | 57.4% |
D4
high
residues 223-279
Domain cluster:
rep: ON755180.1__UVF61144.1__SEA_AOKA_20__00020__D231-283
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wruA03 | 3.30.1920.10 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Baseplate protein-like domains - 2 layer sandwich fold | 0.83 | 64.0 | 6.48e-01 | 100.0% | 83.9% |
| 3cddB03 | 3.30.1920.10 | Alpha Beta › 2-Layer Sandwich › Phage tail proteins - 2 layer sandwich fold › Baseplate protein-like domains - 2 layer sandwich fold | 0.82 | 64.0 | 6.41e-01 | 100.0% | 81.4% |
| 4uhvA03 | 4.10.220.110 | Few Secondary Structures › Irregular › Light-harvesting Protein › | 0.70 | 59.0 | 5.82e-01 | 100.0% | 92.1% |
| 2v4iB01 | 3.30.2330.10 | Alpha Beta › 2-Layer Sandwich › arginine biosynthesis bifunctional protein fold › arginine biosynthesis bifunctional protein suprefamily | 0.60 | 51.0 | 4.69e-01 | 100.0% | 97.4% |
| 3rh0A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.59 | 52.0 | 4.02e-01 | 100.0% | 96.9% |
| 3bbdA00 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.56 | 47.0 | 3.29e-01 | 98.2% | 98.5% |
| 3ds8A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 44.0 | 3.00e-01 | 96.5% | 94.5% |
| 3lp5A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 45.0 | 3.05e-01 | 98.2% | 91.2% |
| 1wghA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 35.0 | 3.18e-01 | 91.2% | 45.8% |
| 1lamA01 | 3.40.220.10 | Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 | 0.54 | 47.0 | 3.43e-01 | 100.0% | 84.8% |
| 2fe3A02 | 3.30.1490.190 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › Ferric-uptake regulator, C-terminal dimerisarion domain | 0.54 | 37.0 | 3.73e-01 | 71.9% | 84.2% |
| 1kkmB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 46.0 | 3.34e-01 | 100.0% | 80.2% |
| 3fleA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 43.0 | 2.95e-01 | 100.0% | 48.1% |
| 4id9B02 | 3.90.25.60 | Alpha Beta › Alpha-Beta Complex › UDP-galactose 4-epimerase; domain 1 › | 0.52 | 36.0 | 2.98e-01 | 75.4% | 39.7% |
| 3v46A00 | 3.40.50.11990 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › RNA polymerase II accessory factor, Cdc73 C-terminal domain | 0.51 | 40.0 | 3.04e-01 | 91.2% | 85.6% |
| 2jfkA02 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.51 | 41.0 | 2.73e-01 | 91.2% | 96.0% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2468520 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.79 | 70.0 | 6.33e-01 | 100.0% | 88.3% |
| 4957567 | 3071.1.1.0 ↗ | a+b complex topology › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins › C-terminal insertion domain in phage tail proteins | 0.77 | 69.0 | 6.48e-01 | 100.0% | 88.6% |
| 3705562 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.60 | 44.0 | 2.56e-01 | 84.2% | 33.3% |
| 2600450 | 7579.1.1.30 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF915 | 0.55 | 44.0 | 3.00e-01 | 96.5% | 94.5% |
| 4680120 | 60.1.1.3 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain › Sld7_N | 0.54 | 43.0 | 3.44e-01 | 96.5% | 89.3% |
| 3286147 | 101.1.2.25 ↗ | alpha arrays › HTH › HTH › winged helix domain › FUR | 0.54 | 34.0 | 2.58e-01 | 100.0% | 26.4% |
| 3997757 | 2004.1.1.124 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CDC73_C | 0.51 | 42.0 | 3.10e-01 | 100.0% | 97.2% |
| 3403557 | 2004.1.1.124 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CDC73_C | 0.51 | 44.0 | 3.15e-01 | 100.0% | 73.7% |
| 3633478 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.51 | 43.0 | 2.78e-01 | 100.0% | 23.1% |