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MT006234.1__QIG78072.1__BRUR0010001c01_00041__00041
Bact-VirMT006234.1__QIG78072.1__BRUR0010001c01_00041__00041
Identity
- Accession:
- MT006234 ↗
- Kingdom:
- phage
Quality
87.7
mean pLDDT
Taxonomy
TaxID: 2713249
Cluster
View cluster (80 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-107
Domain cluster:
rep: NC_042001.1__YP_009610157.1__FDI28_gp81__00029__D22-140
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2od4B01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.73 | 50.0 | 5.42e-01 | 93.4% | 84.3% |
| 2jheA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.71 | 43.0 | 4.85e-01 | 97.2% | 79.0% |
| 6d9mA02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.71 | 55.0 | 4.87e-01 | 100.0% | 57.6% |
| 4bbyA05 | 3.30.300.330 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.70 | 54.0 | 5.45e-01 | 94.3% | 79.6% |
| 2wz1B00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.70 | 57.0 | 4.62e-01 | 100.0% | 46.9% |
| 6lynD01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.70 | 39.0 | 4.23e-01 | 98.1% | 65.5% |
| 1xmbA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 50.0 | 5.20e-01 | 96.2% | 80.2% |
| 4xvoA01 | 2.60.40.3710 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.68 | 41.0 | 4.46e-01 | 93.4% | 70.8% |
| 3p04A00 | 3.30.110.150 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein | 0.68 | 34.0 | 3.95e-01 | 73.6% | 64.9% |
| 1s2oA02 | 3.90.1070.10 | Alpha Beta › Alpha-Beta Complex › Hypothetical Protein Ta0175; Chain: A, domain 2 › | 0.66 | 35.0 | 4.16e-01 | 77.4% | 76.1% |
| 4wvrB00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 40.0 | 4.18e-01 | 100.0% | 65.7% |
| 3e3xA01 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.64 | 43.0 | 4.24e-01 | 94.3% | 64.6% |
| 1khvA03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.63 | 47.0 | 4.37e-01 | 94.3% | 63.1% |
| 1tuwA00 | 3.30.70.1090 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. | 0.61 | 44.0 | 4.41e-01 | 91.5% | 74.5% |
| 2ckwA03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.61 | 47.0 | 4.64e-01 | 94.3% | 75.9% |
| 2plgA01 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.60 | 43.0 | 4.04e-01 | 100.0% | 59.8% |
| 5ao2B02 | 3.30.70.2760 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 44.0 | 4.78e-01 | 93.4% | 92.1% |
| 3h5xA03 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.60 | 44.0 | 4.29e-01 | 94.3% | 70.7% |
| 5iryA05 | 2.60.40.60 | Mainly Beta › Sandwich › Immunoglobulin-like › Cadherins | 0.59 | 38.0 | 4.18e-01 | 98.1% | 81.2% |
| 3girA02 | 3.30.70.1400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains | 0.59 | 43.0 | 4.74e-01 | 94.3% | 93.0% |
| 3h9mA00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.59 | 54.0 | 3.60e-01 | 100.0% | 36.8% |
| 3go9A02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.59 | 52.0 | 4.12e-01 | 98.1% | 74.2% |
| 4g7xB00 | 3.30.1150.10 | Alpha Beta › 2-Layer Sandwich › Fusion Protein Consisting Of Minor Coat Protein, Glycine Rich Linker, Tola, And A His Tag; Chain: A; Domain 2 › | 0.58 | 46.0 | 4.75e-01 | 90.6% | 87.3% |
| 1vw4F02 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.58 | 41.0 | 4.39e-01 | 97.2% | 84.8% |
| 4kw3A00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.57 | 50.0 | 3.80e-01 | 99.1% | 51.9% |
| 4djhA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.55 | 39.0 | 2.90e-01 | 74.5% | 93.4% |
| 2d5wA02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.54 | 38.0 | 3.76e-01 | 99.1% | 66.7% |
| 4e1oA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.54 | 43.0 | 4.46e-01 | 92.5% | 91.8% |
| 2cveA02 | 3.30.70.240 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 32.0 | 3.79e-01 | 100.0% | 93.9% |
| 1vwxH02 | 3.90.930.12 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › Ribosomal protein L6 | 0.54 | 43.0 | 4.43e-01 | 97.2% | 88.3% |
| 1s48A04 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.54 | 32.0 | 3.18e-01 | 92.5% | 54.1% |
| 1ybeB01 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.53 | 46.0 | 3.15e-01 | 97.2% | 27.8% |
| 3gi7A00 | 1.20.1270.180 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.53 | 41.0 | 4.20e-01 | 97.2% | 85.4% |
| 3iu5A00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.53 | 44.0 | 4.32e-01 | 91.5% | 100.0% |
| 5swsE01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 3.96e-01 | 97.2% | 75.7% |
| 1hw1A02 | 1.20.120.530 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like | 0.51 | 40.0 | 3.54e-01 | 87.7% | 58.3% |
| 1yirA00 | 3.20.140.10 | Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase | 0.50 | 43.0 | 3.00e-01 | 100.0% | 26.4% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3273918 | 304.9.1.84 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28975 | 0.76 | 42.0 | 5.26e-01 | 93.4% | 89.2% |
| 4008806 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.73 | 52.0 | 4.33e-01 | 100.0% | 44.6% |
| 3839917 | 304.28.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st | 0.71 | 52.0 | 5.27e-01 | 95.3% | 77.1% |
| 3805306 | 304.9.1.47 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4283 | 0.69 | 43.0 | 4.42e-01 | 99.1% | 66.0% |
| 4027452 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.69 | 49.0 | 5.08e-01 | 98.1% | 79.0% |
| 3313280 | 304.9.1.47 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4283 | 0.68 | 43.0 | 4.63e-01 | 94.3% | 74.4% |
| 3816818 | 304.9.1.47 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4283 | 0.68 | 43.0 | 4.51e-01 | 94.3% | 70.5% |
| 4928347 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.67 | 52.0 | 4.38e-01 | 100.0% | 48.9% |
| 3806188 | 304.9.1.47 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4283 | 0.67 | 42.0 | 4.30e-01 | 94.3% | 63.8% |
| 3345883 | 304.9.1.47 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4283 | 0.67 | 42.0 | 4.63e-01 | 94.3% | 78.8% |
| 3407163 | 304.48.1.6 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A | 0.66 | 54.0 | 5.23e-01 | 98.1% | 78.2% |
| 4098715 | 304.4.1.7 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Cyclase_polyket | 0.66 | 46.0 | 4.65e-01 | 93.4% | 71.6% |
| 3955130 | 304.48.1.48 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › GGDEF_2 | 0.66 | 47.0 | 4.06e-01 | 94.3% | 47.9% |
| 3700778 | 304.159.1.0 ↗ | a+b two layers › Alpha-beta plaits › Alpha-beta plait domain in NisB › Alpha-beta plait domain in NisB | 0.65 | 55.0 | 5.41e-01 | 100.0% | 86.1% |
| 4962207 | 223.11.1.1 ↗ | a+b three layers › Profilin-like › N-terminal domain of Apc beta-subunit › N-terminal domain of Apc beta-subunit › Hydantoinase_B | 0.65 | 54.0 | 4.27e-01 | 89.6% | 91.4% |
| 3907036 | 304.163.1.1 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 | 0.65 | 42.0 | 4.71e-01 | 97.2% | 86.3% |
| 3652712 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.65 | 43.0 | 4.34e-01 | 96.2% | 67.6% |
| 3424438 | 304.9.1.47 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4283 | 0.64 | 40.0 | 4.12e-01 | 91.5% | 65.0% |
| 4945238 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.64 | 53.0 | 4.69e-01 | 96.2% | 62.0% |
| 5018198 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.64 | 57.0 | 4.52e-01 | 100.0% | 85.9% |
| 3615029 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.63 | 48.0 | 5.17e-01 | 99.1% | 96.7% |
| 3361133 | 304.9.1.47 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4283 | 0.63 | 39.0 | 4.50e-01 | 94.3% | 88.0% |
| 4966179 | 309.1.1.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase | 0.62 | 53.0 | 3.83e-01 | 96.2% | 59.0% |
| 4614512 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.61 | 53.0 | 4.16e-01 | 98.1% | 68.5% |
| 3652924 | 309.1.1.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase | 0.60 | 53.0 | 4.12e-01 | 98.1% | 68.9% |
| 3228723 | 304.57.1.1 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › RNase_P_Rpp14 | 0.60 | 44.0 | 4.39e-01 | 98.1% | 74.5% |
| 3783519 | 327.11.2.0 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) | 0.60 | 44.0 | 4.81e-01 | 99.1% | 97.6% |
| 3185440 | 304.48.1.10 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › IMS | 0.59 | 53.0 | 4.12e-01 | 98.1% | 74.3% |
| 3875508 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.59 | 46.0 | 4.32e-01 | 100.0% | 67.7% |
| 4940105 | 309.1.1.14 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › MZB | 0.59 | 53.0 | 4.69e-01 | 100.0% | 78.1% |
| 3894300 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.59 | 47.0 | 4.79e-01 | 93.4% | 89.5% |
| 5057997 | 312.1.1.2 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › HIT | 0.59 | 49.0 | 4.68e-01 | 89.6% | 76.0% |
| 5040747 | 241.1.1.5 ↗ | a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › DUF2299 | 0.59 | 47.0 | 4.19e-01 | 98.1% | 60.0% |
| 3597457 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 45.0 | 4.76e-01 | 98.1% | 94.7% |
| 3715670 | 304.114.1.0 ↗ | a+b two layers › Alpha-beta plaits › Family B DNA polymerase insertion domain › Family B DNA polymerase insertion domain | 0.58 | 45.0 | 4.69e-01 | 92.5% | 88.0% |
| 3708714 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 42.0 | 4.36e-01 | 95.3% | 81.0% |
| 4984786 | 4956.1.1.0 ↗ | a+b two layers › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.58 | 41.0 | 4.50e-01 | 88.7% | 91.8% |
| 3595834 | 304.55.2.0 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like | 0.58 | 46.0 | 4.34e-01 | 100.0% | 70.8% |
| 3597627 | 304.151.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase | 0.58 | 48.0 | 4.75e-01 | 100.0% | 84.3% |
| 3186517 | 304.48.1.10 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › IMS | 0.58 | 51.0 | 4.08e-01 | 95.3% | 76.5% |
| 2319485 | 304.136.1.1 ↗ | a+b two layers › Alpha-beta plaits › Oligo-peptide binding protein (OPPA) insertion domain › Oligo-peptide binding protein (OPPA) insertion domain › SBP_bac_5 | 0.58 | 44.0 | 4.31e-01 | 97.2% | 74.8% |
| 3724818 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.57 | 50.0 | 3.91e-01 | 99.1% | 69.4% |
| 3460773 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.57 | 39.0 | 3.85e-01 | 88.7% | 67.3% |
| 3591695 | 375.1.1.207 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › FAZ1_cons | 0.57 | 43.0 | 4.58e-01 | 100.0% | 98.9% |
| 3595161 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.56 | 44.0 | 4.31e-01 | 94.3% | 78.3% |
| 4015259 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.56 | 49.0 | 4.10e-01 | 100.0% | 67.4% |
| 4451017 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.55 | 49.0 | 3.82e-01 | 99.1% | 62.6% |
| 3789210 | 601.23.1.1 ↗ | alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III | 0.55 | 42.0 | 3.02e-01 | 84.9% | 27.2% |
| 3856612 | 319.1.1.9 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › DPCD | 0.53 | 39.0 | 3.23e-01 | 77.4% | 47.0% |