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MT006236.1__QIG78171.1__BIHU0010003c01_00052__00052
Bact-VirMT006236.1__QIG78171.1__BIHU0010003c01_00052__00052
Identity
- Accession:
- MT006236 ↗
- Kingdom:
- phage
Quality
94.0
mean pLDDT
Taxonomy
TaxID: 2713247
Cluster
View cluster (8 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 9-18_118-225
Domain cluster:
rep: NC_004735.1__NP_835679.1__Rm378p092__00092__D1-33_185-289
CATH (47)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1s5jA03 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.81 | 72.0 | 6.38e-01 | 91.5% | 94.9% |
| 1q8iA04 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.79 | 68.0 | 5.52e-01 | 91.5% | 70.3% |
| 2py5A02 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.78 | 66.0 | 5.64e-01 | 88.1% | 71.5% |
| 2gv9B04 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.77 | 67.0 | 5.52e-01 | 91.5% | 97.0% |
| 5oyhD00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.76 | 58.0 | 5.00e-01 | 80.5% | 91.4% |
| 3r5gA00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.75 | 59.0 | 4.95e-01 | 82.2% | 91.8% |
| 1azsA00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.75 | 59.0 | 4.98e-01 | 83.1% | 91.6% |
| 2w01B00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.74 | 58.0 | 4.89e-01 | 83.1% | 89.3% |
| 1wc1C00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.74 | 58.0 | 4.93e-01 | 83.1% | 94.8% |
| 1ybtB00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.74 | 58.0 | 5.08e-01 | 83.1% | 90.1% |
| 4fxdA05 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.73 | 61.0 | 6.16e-01 | 87.3% | 90.6% |
| 2qv6A01 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.73 | 53.0 | 5.22e-01 | 76.3% | 81.2% |
| 4wp3C00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.72 | 55.0 | 4.69e-01 | 80.5% | 86.1% |
| 1fx2A00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.70 | 57.0 | 4.52e-01 | 86.4% | 99.6% |
| 4dezA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.67 | 49.0 | 5.27e-01 | 75.4% | 88.9% |
| 1rzmA01 | 3.30.70.1140 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phospho-2-dehydro-3-deoxyheptonate aldolase; domain 1 | 0.67 | 45.0 | 5.29e-01 | 82.2% | 100.0% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.67 | 45.0 | 4.00e-01 | 72.0% | 49.1% |
| 3ofgB00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.67 | 48.0 | 5.49e-01 | 97.5% | 100.0% |
| 1bgxT05 | 3.30.70.370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 47.0 | 4.66e-01 | 76.3% | 70.5% |
| 7npaA02 | 3.30.70.3340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 41.0 | 4.73e-01 | 75.4% | 85.9% |
| 1rkiA01 | 3.30.70.1650 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › PDO, CxxC motif | 0.66 | 48.0 | 5.29e-01 | 88.1% | 93.8% |
| 1s7hA02 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 44.0 | 5.10e-01 | 95.8% | 97.6% |
| 2kl8A00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.66 | 44.0 | 5.16e-01 | 78.8% | 96.5% |
| 4qbuA03 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.65 | 37.0 | 4.72e-01 | 70.3% | 100.0% |
| 4pwuC00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.65 | 42.0 | 5.10e-01 | 80.5% | 100.0% |
| 1t94B02 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.65 | 46.0 | 4.67e-01 | 74.6% | 92.4% |
| 2iboA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.64 | 46.0 | 5.18e-01 | 95.8% | 100.0% |
| 3gv5B01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.64 | 46.0 | 4.50e-01 | 76.3% | 93.9% |
| 1vk8A00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 47.0 | 5.22e-01 | 87.3% | 98.9% |
| 3tviA02 | 3.30.2130.10 | Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like | 0.62 | 57.0 | 5.14e-01 | 99.2% | 90.6% |
| 2dy1A03 | 3.30.70.870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 | 0.62 | 38.0 | 4.56e-01 | 72.0% | 96.1% |
| 2cpdA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.61 | 39.0 | 4.64e-01 | 80.5% | 100.0% |
| 1wf1A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 39.0 | 4.45e-01 | 76.3% | 86.7% |
| 1lxjA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 48.0 | 5.09e-01 | 94.1% | 97.1% |
| 1q5yC00 | 3.30.70.1150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 | 0.60 | 41.0 | 4.71e-01 | 72.0% | 100.0% |
| 7uinD01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.59 | 54.0 | 4.73e-01 | 98.3% | 82.0% |
| 1weyA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.59 | 43.0 | 4.55e-01 | 96.6% | 87.5% |
| 2cqhA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.58 | 39.0 | 4.33e-01 | 79.7% | 88.2% |
| 2cpjA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 41.0 | 4.47e-01 | 76.3% | 89.9% |
| 5kfnA01 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.55 | 49.0 | 4.30e-01 | 98.3% | 95.5% |
| 1whvA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.54 | 35.0 | 3.79e-01 | 77.1% | 77.0% |
| 3tmaA01 | 3.30.2130.30 | Alpha Beta › 2-Layer Sandwich › VC0802-like › | 0.54 | 43.0 | 3.99e-01 | 88.1% | 93.5% |
| 2h5eA03 | 3.30.70.3280 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptide chain release factor 3, domain III | 0.53 | 46.0 | 4.48e-01 | 98.3% | 93.4% |
| 1s48A04 | 3.30.70.270 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain | 0.53 | 40.0 | 4.15e-01 | 84.7% | 84.7% |
| 1h72C02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.53 | 40.0 | 3.86e-01 | 80.5% | 99.3% |
| 1s12A00 | 3.30.70.1490 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp | 0.52 | 37.0 | 4.07e-01 | 72.9% | 91.5% |
| 3zieD00 | 3.30.110.150 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein | 0.52 | 28.0 | 3.21e-01 | 86.4% | 70.7% |
ECOD (67)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4932480 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.85 | 72.0 | 5.68e-01 | 88.1% | 94.1% |
| 4978605 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.85 | 75.0 | 5.42e-01 | 91.5% | 73.7% |
| 5025209 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.85 | 72.0 | 5.55e-01 | 88.1% | 91.5% |
| 4982660 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.85 | 73.0 | 5.76e-01 | 89.0% | 87.4% |
| 4939489 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.84 | 73.0 | 6.02e-01 | 91.5% | 89.7% |
| 4977369 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.83 | 70.0 | 5.28e-01 | 87.3% | 83.6% |
| 4981193 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.83 | 73.0 | 5.47e-01 | 91.5% | 83.9% |
| 4983223 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.83 | 73.0 | 5.50e-01 | 91.5% | 84.0% |
| 5076614 | 2484.1.1.328 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B | 0.82 | 71.0 | 4.34e-01 | 90.7% | 33.3% |
| 4942685 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.82 | 69.0 | 4.40e-01 | 87.3% | 43.5% |
| 4970593 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.81 | 68.0 | 5.16e-01 | 87.3% | 83.6% |
| 4419306 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.81 | 69.0 | 5.57e-01 | 89.8% | 89.0% |
| 4956224 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.80 | 69.0 | 5.32e-01 | 89.8% | 87.7% |
| 5000652 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.79 | 70.0 | 6.00e-01 | 94.1% | 97.8% |
| 4461958 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.77 | 67.0 | 5.17e-01 | 91.5% | 79.6% |
| 5012084 | 304.48.1.3 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_B | 0.75 | 65.0 | 5.16e-01 | 91.5% | 91.1% |
| 5019341 | 304.7.1.0 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors | 0.75 | 44.0 | 5.49e-01 | 81.4% | 97.1% |
| 3741560 | 304.48.1.24 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DUF1744 | 0.73 | 62.0 | 4.65e-01 | 89.8% | 80.4% |
| 3386797 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.72 | 53.0 | 4.18e-01 | 76.3% | 100.0% |
| 3962170 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.72 | 53.0 | 5.49e-01 | 76.3% | 100.0% |
| 4003030 | 304.48.1.6 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A | 0.71 | 52.0 | 5.71e-01 | 74.6% | 100.0% |
| 4944833 | 304.48.1.31 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Cas10-Cmr2_palm2 | 0.71 | 53.0 | 4.57e-01 | 78.0% | 66.1% |
| 1681577 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.70 | 54.0 | 4.74e-01 | 80.5% | 85.5% |
| 3289139 | 304.48.1.6 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › DNA_pol_A | 0.70 | 51.0 | 5.19e-01 | 74.6% | 98.3% |
| 3956622 | 304.48.1.4 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › Guanylate_cyc | 0.70 | 51.0 | 5.06e-01 | 76.3% | 88.0% |
| 5035705 | 304.57.1.0 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like | 0.69 | 48.0 | 5.53e-01 | 85.6% | 100.0% |
| 1592140 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.68 | 40.0 | 5.04e-01 | 71.2% | 100.0% |
| 3709693 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.67 | 53.0 | 4.53e-01 | 83.1% | 82.2% |
| 3707607 | 304.24.1.0 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like | 0.67 | 41.0 | 5.01e-01 | 72.9% | 97.3% |
| 3402256 | 304.8.1.49 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › R1_ABCA1 | 0.66 | 44.0 | 5.19e-01 | 83.9% | 100.0% |
| 3603014 | 304.28.1.4 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st | 0.66 | 46.0 | 5.37e-01 | 73.7% | 100.0% |
| 4932536 | 304.19.1.0 ↗ | a+b two layers › Alpha-beta plaits › eIF-2-alpha, C-terminal domain › eIF-2-alpha, C-terminal domain | 0.66 | 45.0 | 5.18e-01 | 80.5% | 96.5% |
| 3593012 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.66 | 42.0 | 5.00e-01 | 72.0% | 100.0% |
| 4227861 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.65 | 41.0 | 5.01e-01 | 70.3% | 100.0% |
| 4140109 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.65 | 41.0 | 5.02e-01 | 72.9% | 100.0% |
| 3277566 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.64 | 41.0 | 4.82e-01 | 81.4% | 100.0% |
| 3594154 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.63 | 45.0 | 4.85e-01 | 97.5% | 88.0% |
| 3273918 | 304.9.1.84 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28975 | 0.63 | 35.0 | 4.50e-01 | 72.9% | 100.0% |
| 4051394 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.62 | 37.0 | 4.60e-01 | 72.0% | 100.0% |
| 3405197 | 304.7.1.1 ↗ | a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Propep_M14 | 0.62 | 41.0 | 4.83e-01 | 95.8% | 100.0% |
| 4455319 | 304.24.1.3 ↗ | a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III | 0.62 | 40.0 | 4.76e-01 | 93.2% | 97.5% |
| 5077139 | 304.4.1.1 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg | 0.61 | 41.0 | 4.79e-01 | 82.2% | 100.0% |
| 3564490 | 304.8.1.54 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_13 | 0.61 | 42.0 | 4.45e-01 | 86.4% | 79.0% |
| 3504994 | 304.163.1.1 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain › R1_ABCA1 | 0.61 | 47.0 | 5.03e-01 | 92.4% | 96.0% |
| 3881758 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.61 | 39.0 | 4.45e-01 | 74.6% | 89.4% |
| 3352545 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.60 | 40.0 | 4.41e-01 | 87.3% | 85.3% |
| 3831150 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.60 | 37.0 | 4.20e-01 | 72.0% | 84.7% |
| 3739629 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.59 | 44.0 | 4.54e-01 | 83.9% | 84.5% |
| 3730774 | 304.9.1.108 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_fung | 0.58 | 41.0 | 4.58e-01 | 78.8% | 95.6% |
| 3919669 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 44.0 | 4.57e-01 | 90.7% | 86.4% |
| 3322864 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.57 | 38.0 | 4.40e-01 | 85.6% | 98.8% |
| 3750774 | 304.9.1.84 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28975 | 0.56 | 38.0 | 4.09e-01 | 83.9% | 81.0% |
| 3314328 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.56 | 38.0 | 4.15e-01 | 86.4% | 85.3% |
| 3815332 | 304.9.1.84 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28975 | 0.56 | 39.0 | 3.85e-01 | 86.4% | 67.2% |
| 3339656 | 304.120.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI | 0.56 | 37.0 | 4.18e-01 | 84.7% | 92.9% |
| 4217703 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.55 | 39.0 | 4.29e-01 | 77.1% | 92.6% |
| 3397461 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.55 | 38.0 | 4.34e-01 | 74.6% | 100.0% |
| 4240243 | 304.41.1.1 ↗ | a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N | 0.55 | 45.0 | 4.26e-01 | 90.7% | 97.9% |
| 3341278 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.55 | 38.0 | 4.15e-01 | 86.4% | 88.4% |
| 3475155 | 304.9.1.84 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28975 | 0.54 | 38.0 | 4.10e-01 | 83.1% | 88.4% |
| 3452287 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.54 | 38.0 | 4.27e-01 | 83.9% | 100.0% |
| 3623508 | 304.9.1.84 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28975 | 0.53 | 37.0 | 3.91e-01 | 87.3% | 81.0% |
| 3919278 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 47.0 | 2.91e-01 | 98.3% | 54.9% |
| 3600578 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 47.0 | 2.93e-01 | 98.3% | 49.0% |
| 3408005 | 2004.1.1.5 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran | 0.52 | 46.0 | 2.90e-01 | 95.8% | 51.0% |
| 3565650 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.52 | 37.0 | 4.18e-01 | 78.0% | 97.8% |
| 3232266 | 304.9.1.84 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF28975 | 0.50 | 34.0 | 3.61e-01 | 83.9% | 79.0% |
D2
high
residues 23-111
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3iqcA00 | 1.20.120.340 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar protein FliS | 0.75 | 57.0 | 5.16e-01 | 79.8% | 89.9% |
| 1wcrA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.67 | 47.0 | 4.48e-01 | 88.8% | 63.1% |
| 3favD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.62 | 43.0 | 4.50e-01 | 91.0% | 80.8% |
| 3m0fB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.61 | 45.0 | 3.96e-01 | 76.4% | 55.3% |
| 1vkeB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.60 | 33.0 | 3.24e-01 | 84.3% | 47.5% |
| 3ibpA01 | 1.20.58.850 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 42.0 | 4.68e-01 | 74.2% | 90.3% |
| 3rq9A00 | 1.10.287.2500 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 37.0 | 3.87e-01 | 89.9% | 69.2% |
| 7wf6A01 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.58 | 50.0 | 4.37e-01 | 100.0% | 95.7% |
| 1or7B01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.57 | 34.0 | 3.38e-01 | 84.3% | 54.3% |
| 4e6nA02 | 6.10.140.1010 | Special › Helix non-globular › Helix Hairpins › | 0.55 | 39.0 | 4.53e-01 | 75.3% | 100.0% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.55 | 40.0 | 3.81e-01 | 83.1% | 65.7% |
| 4cxfA01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.55 | 34.0 | 3.48e-01 | 84.3% | 62.1% |
| 3h3mA00 | 1.20.58.380 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Flagellar protein flit. | 0.55 | 35.0 | 3.59e-01 | 88.8% | 65.2% |
| 3ehfB01 | 6.10.250.2870 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.54 | 45.0 | 4.28e-01 | 88.8% | 78.8% |
| 3m9vA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.53 | 40.0 | 3.34e-01 | 80.9% | 51.6% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 43.0 | 4.08e-01 | 88.8% | 90.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4987361 | 601.2.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Cytochromes › Cytochromes | 0.68 | 52.0 | 4.72e-01 | 82.0% | 80.0% |
| 3443993 | 109.4.1.1736 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PF30261 | 0.66 | 36.0 | 3.16e-01 | 80.9% | 36.2% |
| 3414102 | 5055.1.1.0 ↗ | extended segments › Small-conductance potassium channel › Small-conductance potassium channel › Small-conductance potassium channel | 0.59 | 41.0 | 4.51e-01 | 95.5% | 92.9% |
| None | — | 0.59 | 36.0 | 3.48e-01 | 87.6% | 51.4% | |
| 3909150 | 5063.1.1.15 ↗ | alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › OCIA | 0.58 | 40.0 | 4.26e-01 | 100.0% | 84.0% |
| 3241234 | 101.44.1.0 ↗ | alpha arrays › HTH › Helical domain in DNA-Damage-Inducible 2 (Ddi2) (DEPRECATED) › Helical domain in DNA-Damage-Inducible 2 (Ddi2) (DEPRECATED) | 0.52 | 43.0 | 4.28e-01 | 91.0% | 91.6% |
D3
high
residues 232-324
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.61 | 35.0 | 3.94e-01 | 86.0% | 75.8% |
| 4fssB00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.55 | 30.0 | 3.47e-01 | 84.9% | 75.4% |
| 1n26A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 38.0 | 4.04e-01 | 96.8% | 91.0% |
| 3fcgB00 | 2.60.40.3110 | Mainly Beta › Sandwich › Immunoglobulin-like › Outer membrane usher protein | 0.52 | 33.0 | 3.67e-01 | 97.8% | 84.5% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.52 | 29.0 | 3.27e-01 | 86.0% | 73.1% |
| 5iroD00 | 2.60.40.3530 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 42.0 | 4.11e-01 | 94.6% | 82.4% |
| 3v6oA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 37.0 | 3.85e-01 | 100.0% | 83.9% |
| 3muuB02 | 2.60.40.2400 | Mainly Beta › Sandwich › Immunoglobulin-like › Alphavirus E2 glycoprotein, domain C | 0.51 | 34.0 | 3.74e-01 | 98.9% | 89.0% |
| 1o7fA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.50 | 41.0 | 3.53e-01 | 90.3% | 72.3% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3396896 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 37.0 | 4.05e-01 | 86.0% | 65.3% |
| 4207556 | 4.1.1.58 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_3 | 0.58 | 35.0 | 3.95e-01 | 89.2% | 80.0% |
| 3715940 | 10.12.1.0 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix | 0.55 | 36.0 | 2.94e-01 | 74.2% | 35.3% |
| 3931715 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.55 | 32.0 | 3.14e-01 | 89.2% | 51.0% |
| 3218647 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.54 | 31.0 | 3.42e-01 | 89.2% | 71.4% |
| 3494789 | 5.1.4.320 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_LRRK2 | 0.50 | 37.0 | 2.46e-01 | 77.4% | 85.4% |
| 3680919 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.50 | 36.0 | 3.33e-01 | 94.6% | 60.0% |