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MT006237.1__QIG78197.1__BIBE0010001c01_00011__00011

Bact-Vir

MT006237.1__QIG78197.1__BIBE0010001c01_00011__00011

Identity

Accession:
MT006237 ↗
Kingdom:
phage

Quality

85.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bifidobacterium_phage_BigBern1

TaxID: 2713246

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-76
PDB
Domain cluster: rep: MH651168.1__AXQ62964.1__SEA_ASHERTHEMAN_57__00057__D3-84
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3mkzN00 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.63 52.0 4.60e-01 93.2% 62.7%
2zc2A00 1.10.10.630 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DnaD domain-like 0.60 52.0 5.17e-01 98.6% 98.7%
1yozA00 1.10.3200.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like 0.59 33.0 2.84e-01 97.3% 35.4%
2pkeA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.59 41.0 4.05e-01 72.6% 71.8%
2lrmA00 1.10.890.30 Mainly Alpha › Orthogonal Bundle › 10k-s Protein, Hypothetical Protein A; Chain A › YmgD protein 0.59 44.0 4.21e-01 84.9% 69.0%
3vwbA00 1.10.10.2830 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.59 47.0 4.18e-01 93.2% 63.8%
3qhbA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.58 44.0 3.35e-01 83.6% 52.5%
1jr3C02 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.56 39.0 3.37e-01 74.0% 98.4%
2c61A00 3.40.50.12240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 47.0 2.98e-01 100.0% 72.4%
1w2yA00 1.10.4010.10 Mainly Alpha › Orthogonal Bundle › all-alpha NTP pyrophosphatase fold › Type II deoxyuridine triphosphatase 0.53 47.0 3.30e-01 97.3% 90.7%
4rv5A01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.53 46.0 3.40e-01 100.0% 93.8%
5reqB03 1.10.196.20 Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 1 › 0.53 28.0 3.25e-01 91.8% 76.7%
3lynB00 1.20.150.10 Mainly Alpha › Up-down Bundle › Lysin › Fertilization protein 0.53 41.0 3.49e-01 84.9% 76.6%
1eqfA02 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.52 39.0 3.32e-01 80.8% 68.0%
4n4gA01 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.52 36.0 3.24e-01 75.3% 67.6%
3hssA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 35.0 2.43e-01 71.2% 57.3%
1floA01 3.30.300.80 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › FLP Recombinase, lambda integrase-like, N-terminal domain (domain 1) 0.50 40.0 3.65e-01 90.4% 99.0%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1556747 148.1.3.113 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_TRIP13_C 0.69 60.0 4.92e-01 100.0% 69.0%
4048400 4230.1.1.3 ↗ alpha arrays › DnaD domain › DnaD domain › DnaD domain › DnaB_2 0.64 56.0 5.34e-01 100.0% 95.3%
4949602 601.7.1.34 ↗ alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › DUF4129 0.62 42.0 3.88e-01 71.2% 85.3%
3708209 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.62 49.0 4.89e-01 98.6% 86.7%
4003682 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.60 48.0 4.86e-01 97.3% 90.7%
4950231 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.60 51.0 4.76e-01 100.0% 80.0%
3988210 4230.1.1.3 ↗ alpha arrays › DnaD domain › DnaD domain › DnaD domain › DnaB_2 0.60 51.0 4.73e-01 98.6% 85.3%
3588170 4230.1.1.3 ↗ alpha arrays › DnaD domain › DnaD domain › DnaD domain › DnaB_2 0.58 48.0 4.54e-01 98.6% 86.3%
4995693 4230.1.1.0 ↗ alpha arrays › DnaD domain › DnaD domain › DnaD domain 0.57 46.0 4.63e-01 97.3% 88.0%
4442514 103.1.1.6 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C 0.55 37.0 4.23e-01 79.5% 100.0%
4406331 148.1.3.172 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_14 0.55 45.0 4.30e-01 98.6% 77.8%
3605549 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.55 38.0 3.46e-01 72.6% 99.0%
3977168 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.54 45.0 4.48e-01 91.8% 97.3%
5059610 148.1.3.403 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › RNA_pol_Rpb1_5 0.54 45.0 3.70e-01 100.0% 48.4%
5048936 3960.1.1.0 ↗ alpha arrays › Aminoglycoside adenyltransferase AadA C-terminal domain › Aminoglycoside adenyltransferase AadA C-terminal domain › Aminoglycoside adenyltransferase AadA C-terminal domain 0.54 38.0 3.37e-01 76.7% 70.0%
4512916 148.1.3.172 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_14 0.53 43.0 4.20e-01 90.4% 87.5%
3970860 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.53 45.0 4.43e-01 100.0% 91.3%
3225553 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.52 34.0 3.09e-01 89.0% 47.6%
3306934 632.1.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain 0.51 35.0 3.08e-01 71.2% 89.1%
4419537 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.51 35.0 3.20e-01 71.2% 77.0%
2649102 148.1.3.40 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ORC5_lid 0.51 44.0 3.81e-01 100.0% 74.2%
3653829 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.50 43.0 3.86e-01 100.0% 78.2%
4302931 610.3.1.0 ↗ alpha arrays › ERP29 C domain-like › GatB/GatE C-terminal domain › GatB/GatE C-terminal domain 0.50 44.0 3.52e-01 100.0% 60.7%
4030708 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.50 44.0 2.58e-01 100.0% 35.5%
D2 high residues 81-131
PDB
Domain cluster: representative
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tfeA02 1.10.286.20 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › 0.85 60.0 6.32e-01 74.5% 86.7%
2h09A02 1.10.60.10 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain 0.84 56.0 5.41e-01 70.6% 62.5%
4h8aB01 1.10.1530.10 Mainly Alpha › Orthogonal Bundle › Hypothetical Oxidoreductase Yiak; Chain: A, domain 1 › Malate/L-lactate/L-sulpholactate dehydrogenase, four-helix barrel 0.84 58.0 5.46e-01 72.5% 61.7%
4e84B00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.83 76.0 4.58e-01 100.0% 38.7%
1vm7B00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.83 76.0 4.60e-01 100.0% 41.8%
4e69A00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.82 74.0 4.49e-01 100.0% 41.6%
2hlzA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.81 74.0 4.50e-01 100.0% 40.9%
2aplA01 1.10.8.330 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › PG0816-like 0.81 71.0 6.51e-01 100.0% 100.0%
2qcvA01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.80 73.0 4.50e-01 100.0% 48.4%
3mbhA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.80 71.0 4.38e-01 100.0% 50.9%
4jndA01 1.10.1740.220 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › 0.80 56.0 4.14e-01 74.5% 29.2%
3ibyD02 1.10.287.1770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.80 58.0 4.93e-01 78.4% 76.2%
3rm5B01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.80 72.0 4.37e-01 100.0% 45.1%
4o1gA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.79 72.0 4.32e-01 100.0% 30.7%
3vasA01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.79 73.0 4.44e-01 100.0% 41.1%
2c4eA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.79 71.0 4.31e-01 100.0% 40.5%
3bf5A01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.79 70.0 4.45e-01 100.0% 48.3%
1v1aA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.78 71.0 4.30e-01 100.0% 31.2%
3lupA01 3.40.50.10170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.78 62.0 4.46e-01 90.2% 97.4%
3looB01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.78 70.0 4.31e-01 100.0% 50.4%
2nwhA00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.78 71.0 4.28e-01 100.0% 31.6%
1dgmA01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.78 69.0 4.32e-01 100.0% 53.6%
2ddmB00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.78 70.0 4.34e-01 100.0% 49.4%
3otxB01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.78 69.0 4.28e-01 100.0% 49.5%
4du5B00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.78 69.0 4.24e-01 100.0% 41.4%
1nxhA00 1.10.3070.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein MTH393 › EhaM-like 0.76 64.0 4.94e-01 100.0% 49.2%
1yqgA02 1.10.3730.10 Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › ProC C-terminal domain-like 0.75 52.0 4.06e-01 74.5% 36.3%
3triA02 1.10.3730.10 Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › ProC C-terminal domain-like 0.75 53.0 4.19e-01 74.5% 38.8%
3h49B00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.75 67.0 4.09e-01 100.0% 31.4%
3nctA00 3.40.50.11880 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Plasmid SOS inhibition protein 0.74 60.0 4.46e-01 92.2% 56.2%
4m70B00 1.10.246.200 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › WPP domain 0.74 63.0 5.23e-01 96.1% 87.9%
3jr7A01 3.40.50.10440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dihydroxyacetone kinase; domain 1 0.74 60.0 4.67e-01 94.1% 94.9%
1np3B02 6.10.240.10 Special › Helix non-globular › ProC C-terminal domain-like fold › 0.74 53.0 3.73e-01 74.5% 28.3%
2q0yA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.73 51.0 3.73e-01 72.5% 26.8%
1c9bA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.73 59.0 4.80e-01 96.1% 54.7%
6mh4A03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.72 57.0 5.03e-01 90.2% 68.4%
1un8A02 1.25.40.340 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › DhaL domain 0.72 65.0 4.26e-01 98.0% 57.8%
2g8lB01 1.10.8.380 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 0.72 59.0 5.53e-01 98.0% 91.0%
1zu4A01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.71 60.0 5.15e-01 100.0% 63.2%
3c3dA02 1.10.8.240 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › CofD-like domain 0.71 58.0 4.91e-01 94.1% 97.7%
3vpxB02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.71 60.0 4.08e-01 100.0% 90.5%
1c9bA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.70 47.0 3.90e-01 70.6% 37.1%
2ahrA02 1.10.3730.10 Mainly Alpha › Orthogonal Bundle › ProC C-terminal domain-like fold › ProC C-terminal domain-like 0.70 48.0 3.85e-01 74.5% 36.8%
1vibA00 1.10.287.120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Neurotoxin B-IV-like 0.69 46.0 4.58e-01 70.6% 67.3%
2x49A03 1.10.8.540 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › FHIPEP family, domain 3 0.69 57.0 4.89e-01 100.0% 61.1%
3vayA02 1.20.120.1600 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.69 58.0 4.83e-01 100.0% 54.0%
2kptA00 3.10.310.50 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › 0.68 59.0 4.28e-01 100.0% 50.0%
2gfhA02 1.20.120.710 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain 0.68 47.0 4.03e-01 74.5% 45.3%
3a11B01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.68 58.0 4.36e-01 98.0% 46.4%
2lyiA01 1.10.274.60 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain 0.66 55.0 4.11e-01 100.0% 81.1%
4k7cA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.66 47.0 2.80e-01 76.5% 27.7%
3b4qA00 1.10.1200.100 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › conserved protein domain from corynebacterium diphtheriae 0.65 50.0 4.39e-01 98.0% 55.2%
3owaA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.64 47.0 3.32e-01 80.4% 88.9%
1rr7A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.62 44.0 4.55e-01 76.5% 82.6%
3fblA00 1.20.58.800 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 52.0 4.53e-01 100.0% 75.6%
3vsjA00 3.40.830.10 Alpha Beta › 3-Layer(aba) Sandwich › Protocatechuate 4,5-dioxygenase; Chain B › LigB-like 0.61 44.0 2.82e-01 78.4% 60.4%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4937043 7516.1.1.2 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 0.95 68.0 3.96e-01 74.5% 10.7%
3278955 6169.1.1.0 ↗ extended segments › Transmembrane segment of lysosome-associated membrane glycoprotein 2 › Transmembrane segment of lysosome-associated membrane glycoprotein 2 › Transmembrane segment of lysosome-associated membrane glycoprotein 2 0.91 62.0 6.89e-01 70.6% 95.0%
4411911 198.2.1.3 ↗ alpha arrays › Saposin-like › Bacteriocin AS-48-related › Bacteriocin AS-48-related › SseC 0.87 62.0 4.42e-01 74.5% 28.1%
3954850 268.2.1.1 ↗ a+b two layers › Sterol carrier protein-like › LytR-Cps2A-Psr (LCP) enzymes › LytR-Cps2A-Psr (LCP) enzymes › LytR_cpsA_psr 0.85 69.0 4.11e-01 86.3% 31.9%
4338988 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.84 78.0 4.73e-01 100.0% 42.8%
4635506 230.3.1.1 ↗ a+b two layers › T-fold › Elongation factor Ts (EF-Ts), dimerisation domain › Elongation factor Ts (EF-Ts), dimerisation domain › EF_TS 0.84 59.0 4.22e-01 74.5% 27.1%
5047182 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.84 58.0 5.35e-01 72.5% 60.0%
4998664 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.83 76.0 4.52e-01 100.0% 38.3%
4290581 2003.6.1.5 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin 0.82 74.0 4.55e-01 100.0% 50.5%
3576589 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.81 74.0 4.98e-01 100.0% 70.0%
1255408 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.81 75.0 4.52e-01 100.0% 43.4%
3115 4199.1.1.1 ↗ alpha arrays › PG0816-like › PG0816-like › PG0816-like › DUF1896 0.81 72.0 5.11e-01 100.0% 46.3%
4969085 2003.6.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like 0.81 74.0 4.56e-01 100.0% 47.1%
3231906 397.7.1.4 ↗ few secondary structure elements › Toxic hairpin › Ribosome-inactivating protein luffin P1 › Ribosome-inactivating protein luffin P1 › C_tripleX 0.81 57.0 6.01e-01 74.5% 84.4%
5079416 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.81 73.0 4.72e-01 100.0% 57.2%
5008048 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.80 73.0 4.49e-01 100.0% 32.9%
3588797 4084.1.1.0 ↗ alpha bundles › ChaB-like › ChaB-like › ChaB-like 0.80 72.0 6.59e-01 100.0% 78.5%
5071201 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.80 72.0 4.41e-01 100.0% 34.1%
3943510 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.80 71.0 4.33e-01 100.0% 41.9%
3971129 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.80 71.0 4.32e-01 100.0% 41.0%
3500851 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.79 71.0 4.31e-01 100.0% 45.5%
5032477 129.1.1.15 ↗ alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › P5CR_dimer 0.79 56.0 4.29e-01 74.5% 36.4%
4935857 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.79 72.0 4.34e-01 100.0% 32.7%
5070459 2485.1.1.67 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GILT 0.79 67.0 4.53e-01 94.1% 53.3%
4999235 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.79 70.0 4.28e-01 100.0% 40.6%
4952580 2003.6.1.5 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › Phos_pyr_kin 0.79 70.0 4.45e-01 100.0% 56.7%
5078276 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.79 70.0 4.31e-01 100.0% 42.8%
3996657 4979.2.1.1 ↗ alpha arrays › C-terminal domain of Hypothetical protein MPN330-like › XRN2-binding domain (XTBD) › XRN2-binding domain (XTBD) › XTBD 0.79 67.0 6.83e-01 100.0% 100.0%
3502025 2485.1.1.67 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GILT 0.78 67.0 4.38e-01 94.1% 36.1%
1174242 129.1.1.15 ↗ alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › P5CR_dimer 0.78 56.0 5.28e-01 76.5% 63.9%
3973020 1197.1.1.0 ↗ alpha bundles › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY › Integral membrane glycerol 3-phosphate acyltransferase PlsY 0.78 70.0 4.70e-01 100.0% 56.7%
4172097 4084.1.1.1 ↗ alpha bundles › ChaB-like › ChaB-like › ChaB-like › ChaB 0.77 70.0 6.64e-01 100.0% 85.0%
3336896 2003.6.1.1 ↗ a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.77 68.0 4.47e-01 100.0% 48.6%
4990528 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.75 61.0 5.30e-01 96.1% 62.4%
3255785 129.1.1.15 ↗ alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › P5CR_dimer 0.74 52.0 4.07e-01 74.5% 34.5%
4092707 1023.1.1.1 ↗ beta barrels › Cell division protein ZapC N-terminal domain › Cell division protein ZapC N-terminal domain › Cell division protein ZapC N-terminal domain › ZapC_N 0.74 62.0 5.14e-01 94.1% 97.8%
4995676 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.74 64.0 5.78e-01 100.0% 74.3%
3489683 198.1.1.0 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.73 47.0 4.23e-01 74.5% 45.3%
4191254 1023.1.1.1 ↗ beta barrels › Cell division protein ZapC N-terminal domain › Cell division protein ZapC N-terminal domain › Cell division protein ZapC N-terminal domain › ZapC_N 0.73 60.0 5.03e-01 94.1% 95.6%
3221291 7062.1.1.1 ↗ alpha bundles › Helical domain of retinal degeneration 3 protein › Helical domain of retinal degeneration 3 protein › Helical domain of retinal degeneration 3 protein › RD3 0.73 60.0 4.65e-01 96.1% 87.5%
4990523 129.1.1.15 ↗ alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › P5CR_dimer 0.73 51.0 4.16e-01 74.5% 40.0%
4107264 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 49.0 3.83e-01 72.5% 32.2%
3925650 5076.1.1.1 ↗ alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr 0.72 66.0 3.99e-01 98.0% 41.1%
3959831 5067.1.1.0 ↗ alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain 0.72 62.0 4.51e-01 100.0% 56.0%
5003451 186.1.1.4 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.72 56.0 4.30e-01 90.2% 40.8%
4286470 5067.1.1.2 ↗ alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › SecD_SecF 0.71 63.0 4.15e-01 100.0% 39.5%
5034808 4009.1.1.1 ↗ alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom 0.71 60.0 5.48e-01 100.0% 88.6%
3841185 2004.5.1.1 ↗ a/b three-layered sandwiches › P-loop domains-like › Differentially expressed in normal cells and neoplasia (DENN) domain › Differentially expressed in normal cells and neoplasia (DENN) domain › DENN,dDENN 0.71 59.0 3.84e-01 98.0% 61.2%
4560524 2498.1.1.9 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M1 0.71 65.0 3.98e-01 100.0% 42.9%
3842317 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.70 49.0 3.22e-01 74.5% 20.5%
4285344 108.2.1.1 ↗ alpha arrays › EF-hand › Insect pheromone/odorant-binding proteins › Insect pheromone/odorant-binding proteins › PBP_GOBP 0.70 58.0 4.54e-01 96.1% 48.7%
5082367 4009.1.1.0 ↗ alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins 0.70 57.0 5.40e-01 98.0% 95.4%
3535287 101.1.10.7 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C 0.70 58.0 5.23e-01 100.0% 77.3%
3618916 601.1.2.0 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) 0.69 53.0 3.77e-01 84.3% 55.6%
3166682 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.69 55.0 4.63e-01 96.1% 53.0%
4931308 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.69 58.0 4.32e-01 96.1% 40.7%
5022369 1075.5.1.8 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Multidrug and toxic compound extrusion (MATE) transporter › Multidrug and toxic compound extrusion (MATE) transporter › Polysacc_synt_3 0.69 56.0 3.45e-01 90.2% 58.2%
1719256 159.1.2.0 ↗ alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related 0.69 57.0 3.94e-01 100.0% 43.9%
4987541 611.8.1.0 ↗ alpha bundles › N-cbl like › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 › C-terminal domain of E3 ubiquitin-protein ligase ARIH1 0.69 57.0 4.56e-01 98.0% 73.6%
4932089 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.68 55.0 4.32e-01 96.1% 42.5%
3603383 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.68 56.0 5.25e-01 98.0% 81.5%
4939372 4009.1.1.0 ↗ alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins 0.67 55.0 5.06e-01 98.0% 84.3%
3868871 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.67 48.0 3.25e-01 78.4% 22.0%
3489682 198.1.1.3 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like › SapB_1 0.67 47.0 4.20e-01 74.5% 52.0%
5060609 632.8.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 › alpha-2-Macroglobulin receptor associated protein (RAP) domain 1 0.66 46.0 4.20e-01 76.5% 52.0%
3474051 198.1.1.0 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.65 46.0 4.14e-01 74.5% 51.4%
3491082 198.1.1.0 ↗ alpha arrays › Saposin-like › Saposin-like › Saposin-like 0.60 41.0 3.78e-01 74.5% 52.7%
3682205 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.59 52.0 3.75e-01 100.0% 37.9%
4453955 4230.1.1.3 ↗ alpha arrays › DnaD domain › DnaD domain › DnaD domain › DnaB_2 0.58 47.0 3.73e-01 100.0% 47.2%
2596506 192.29.1.0 ↗ alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) 0.57 47.0 3.35e-01 92.2% 68.8%
3534307 601.1.1.98 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › PF27524 0.55 47.0 3.45e-01 98.0% 55.9%