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MT006237.1__QIG78198.1__BIBE0010001c01_00012__00012

Bact-Vir

MT006237.1__QIG78198.1__BIBE0010001c01_00012__00012

Identity

Accession:
MT006237 ↗
Kingdom:
phage

Quality

76.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bifidobacterium_phage_BigBern1

TaxID: 2713246

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-98
PDB
Domain cluster: rep: IMGVR_UViG_3300021513_000102-3300021513-Ga0190315_10005481__D86-160
D2 high residues 176-245
PDB
Domain cluster: representative
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ivxB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.64 47.0 3.82e-01 80.0% 46.4%
1zp2A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.61 44.0 3.87e-01 97.1% 49.1%
4fxdA04 3.90.1600.10 Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain 0.60 42.0 3.30e-01 74.3% 77.1%
1jkwA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.59 45.0 4.06e-01 84.3% 61.4%
5xs2B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.58 43.0 3.56e-01 95.7% 42.4%
6z4xA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.57 42.0 3.37e-01 87.1% 36.8%
3lcvB01 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.56 39.0 4.20e-01 91.4% 89.5%
2i53A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.54 41.0 3.66e-01 85.7% 54.1%
3vz3A01 3.40.605.10 Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 0.53 45.0 3.11e-01 100.0% 82.1%
3cxbA03 1.10.1740.30 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Secreted effector protein SifA helical domain 0.52 39.0 3.82e-01 85.7% 79.0%
2wglA00 1.10.4190.10 Mainly Alpha › Orthogonal Bundle › Urease accessory protein UreF › Urease accessory protein UreF 0.52 39.0 2.84e-01 82.9% 43.1%
3keyA01 1.10.10.1080 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain 0.51 33.0 3.12e-01 81.4% 52.9%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3255346 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.61 45.0 3.77e-01 87.1% 43.8%
3716420 130.1.1.6 ↗ alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › PRP4 0.60 34.0 3.82e-01 74.3% 70.9%
3703267 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.60 44.0 3.81e-01 91.4% 47.5%
4999517 2004.1.1.156 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_5 0.60 50.0 3.49e-01 100.0% 34.1%
3526937 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.59 44.0 3.58e-01 87.1% 40.7%
3955227 148.1.3.0 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.58 51.0 4.59e-01 100.0% 73.5%
3517691 101.1.10.7 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C 0.58 44.0 3.76e-01 95.7% 49.2%
5043762 148.1.3.50 ↗ alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Cdc6_lid 0.58 47.0 4.64e-01 100.0% 89.3%
3593195 110.1.1.0 ↗ alpha arrays › DEATH domain › DEATH domain › DEATH domain 0.54 38.0 3.60e-01 77.1% 62.4%
5026768 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.53 43.0 3.78e-01 100.0% 60.0%
3930199 101.1.10.7 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C 0.52 44.0 3.57e-01 97.1% 95.7%