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MT006237.1__QIG78233.1__BIBE0010001c01_00047__00047

Bact-Vir

MT006237.1__QIG78233.1__BIBE0010001c01_00047__00047

Identity

Accession:
MT006237 ↗
Kingdom:
phage

Quality

84.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bifidobacterium_phage_BigBern1

TaxID: 2713246

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-73
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2bskE00 1.10.287.810 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Mitochondrial import inner membrane translocase subunit tim13 like domains 0.63 45.0 4.84e-01 94.5% 87.3%
4nlcA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.51 38.0 2.70e-01 83.6% 35.1%
1rmvA00 1.20.120.70 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Tobacco mosaic virus-like, coat protein 0.51 36.0 2.91e-01 76.7% 80.1%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3487880 5063.1.1.0 ↗ alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK 0.60 45.0 4.77e-01 89.0% 89.2%
3710673 2005.1.1.1 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1 0.60 42.0 2.89e-01 86.3% 21.2%
3592351 304.55.2.0 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like 0.53 37.0 3.09e-01 75.3% 61.4%
3454947 1075.4.1.1 ↗ alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › Type I ABC exporter transmembrane domain fold › ABC_membrane 0.51 42.0 2.96e-01 94.5% 32.0%