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MT006237.1__QIG78234.1__BIBE0010001c01_00048__00048
Bact-VirMT006237.1__QIG78234.1__BIBE0010001c01_00048__00048
Identity
- Accession:
- MT006237 ↗
- Kingdom:
- phage
Quality
78.6
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 26-108
Domain cluster:
rep: MK061416.1__AZF88196.1__SEA_SPARTOI_12__00013__D39-119
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ls1A00 | 1.20.120.290 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Oxygen-evolving enhancer protein 3 (PsbQ), four-helix up-down bundle | 0.61 | 49.0 | 4.22e-01 | 88.0% | 90.2% |
| 4k7bA00 | 1.20.120.1740 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Sodium ion translocating NADH-quinone reductase subunit C-like | 0.57 | 45.0 | 4.09e-01 | 84.3% | 80.2% |
| 3shgA00 | 1.10.3290.10 | Mainly Alpha › Orthogonal Bundle › Fic-like fold › Fido-like domain | 0.53 | 42.0 | 3.29e-01 | 89.2% | 70.7% |
| 3qvmB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 44.0 | 3.20e-01 | 98.8% | 63.2% |
| 1k78I00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.52 | 34.0 | 3.80e-01 | 96.4% | 94.8% |
| 2feaA02 | 3.90.1470.20 | Alpha Beta › Alpha-Beta Complex › thrh gene product, domain 2 › | 0.52 | 38.0 | 3.68e-01 | 80.7% | 83.7% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4937201 | 632.3.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Phosphoprotein XD domain › Phosphoprotein XD domain | 0.56 | 42.0 | 4.12e-01 | 80.7% | 76.7% |
| 3937208 | 170.2.1.0 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein N-terminal domain › Retrovirus capsid protein N-terminal domain | 0.54 | 41.0 | 4.25e-01 | 88.0% | 92.0% |
| 4941639 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.54 | 37.0 | 3.00e-01 | 100.0% | 35.8% |
| 3597126 | 509.1.1.0 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain | 0.53 | 42.0 | 3.98e-01 | 88.0% | 83.0% |
| 3517067 | 170.1.1.0 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C | 0.51 | 36.0 | 3.85e-01 | 86.7% | 90.0% |
| 5028132 | 182.1.3.0 ↗ | alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX | 0.51 | 31.0 | 3.23e-01 | 84.3% | 62.5% |
| 5058643 | 4040.1.1.1 ↗ | alpha bundles › Fic-like › Fic-like › Fic-like › Fic | 0.51 | 40.0 | 3.01e-01 | 90.4% | 41.3% |
| 4031198 | 604.15.1.2 ↗ | alpha bundles › Spectrin repeat-like › Efb C-domain-like › Efb C-domain-like › Sbi-IV | 0.50 | 30.0 | 3.60e-01 | 78.3% | 90.9% |