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MT024868.1__QIN94375.1__SEA_ABBA_46__00046
Bact-VirMT024868.1__QIN94375.1__SEA_ABBA_46__00046
Identity
- Accession:
- MT024868 ↗
- Kingdom:
- phage
Quality
83.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Berryhillviridae›
Ayohtrevirus›
Arthrobacter_phage_Abba
TaxID: 2713256
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 8-76
Domain cluster:
rep: SR-VP_0-2_scaffold_141_4939684_prodigal-single.1__X__X__00138__D6-73
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2r41A00 | 3.10.450.150 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › enterococcus faecalis protein | 0.70 | 34.0 | 2.99e-01 | 100.0% | 30.1% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.60 | 47.0 | 4.62e-01 | 87.0% | 93.4% |
| 3h2dB00 | 3.40.1550.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like | 0.57 | 49.0 | 3.90e-01 | 100.0% | 72.7% |
| 4mi7A00 | 3.90.70.170 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.56 | 38.0 | 3.21e-01 | 71.0% | 53.2% |
| 1konA02 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.54 | 48.0 | 4.41e-01 | 100.0% | 87.8% |
| 1dleB02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 42.0 | 3.40e-01 | 88.4% | 71.8% |
| 1mw7A02 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.53 | 45.0 | 4.24e-01 | 97.1% | 96.6% |
| 3bgyA00 | 3.20.100.10 | Alpha Beta › Alpha-Beta Barrel › mRNA Triphosphatase Cet1; Chain A › mRNA triphosphatase Cet1-like | 0.53 | 36.0 | 2.59e-01 | 71.0% | 48.7% |
| 3kf3A02 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.51 | 35.0 | 2.71e-01 | 72.5% | 59.9% |
| 1jllB01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.51 | 39.0 | 3.09e-01 | 85.5% | 63.2% |
| 1vi7A01 | 3.30.230.30 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › Impact, N-terminal domain | 0.51 | 38.0 | 3.13e-01 | 82.6% | 93.3% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4989110 | 884.1.1.1 ↗ | a+b two layers › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › Hypothetical protein YjiA, C-terminal domain › CobW_C | 0.69 | 32.0 | 3.04e-01 | 100.0% | 36.3% |
| 4007508 | 3115.6.1.2 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › PF28597 | 0.63 | 41.0 | 4.61e-01 | 71.0% | 92.0% |
| 3553310 | 12.5.1.18 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › ZU5/Nup98-C/GAIN-B autoproteolytic domain-related › UPA-FIIND | 0.63 | 56.0 | 4.63e-01 | 100.0% | 72.8% |
| 4030871 | 3115.6.1.1 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › RpoY | 0.62 | 48.0 | 4.87e-01 | 87.0% | 98.6% |
| 3975705 | 3115.6.1.0 ↗ | a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon | 0.62 | 40.0 | 4.44e-01 | 75.4% | 92.0% |
| 3388590 | 379.1.1.0 ↗ | few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors | 0.58 | 40.0 | 4.18e-01 | 92.8% | 83.3% |
| 3670605 | 330.1.1.3 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dimer | 0.57 | 31.0 | 2.86e-01 | 100.0% | 37.8% |
| 4633704 | 4007.1.1.1 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg | 0.57 | 49.0 | 4.55e-01 | 97.1% | 94.4% |
| 4120969 | 4007.1.1.1 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg | 0.56 | 48.0 | 4.23e-01 | 97.1% | 95.2% |
| 5026235 | 304.165.1.5 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 › HVO_A0563_N | 0.55 | 40.0 | 3.16e-01 | 78.3% | 100.0% |
| 3432908 | 5.1.3.118 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 | 0.53 | 41.0 | 2.63e-01 | 82.6% | 99.4% |
| 3228169 | 2484.1.1.233 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DUF1280 | 0.53 | 45.0 | 3.02e-01 | 100.0% | 62.4% |
| 4487057 | 4007.1.1.1 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg | 0.53 | 46.0 | 4.28e-01 | 100.0% | 94.4% |
| 3218109 | 4007.1.1.1 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg | 0.53 | 44.0 | 4.12e-01 | 95.7% | 95.6% |
| 4038267 | 4007.1.1.1 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg | 0.53 | 46.0 | 4.16e-01 | 100.0% | 86.9% |
| 3280245 | 9.4.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains | 0.53 | 34.0 | 3.01e-01 | 100.0% | 43.8% |
| 4174474 | 4007.1.1.1 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg | 0.53 | 46.0 | 4.23e-01 | 100.0% | 96.7% |
| 4667951 | 4007.1.1.0 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins | 0.53 | 46.0 | 4.22e-01 | 98.6% | 94.4% |
| 4289852 | 4007.1.1.1 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg | 0.52 | 45.0 | 4.25e-01 | 98.6% | 100.0% |
| 4150387 | 4007.1.1.1 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg | 0.52 | 45.0 | 4.21e-01 | 98.6% | 98.8% |
| 3626327 | 4007.1.1.0 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins | 0.52 | 44.0 | 4.17e-01 | 98.6% | 97.6% |
| 3786945 | 4007.1.1.1 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › Transcrip_reg | 0.51 | 45.0 | 4.07e-01 | 100.0% | 91.6% |
| 3790333 | 11.1.1.1009 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26432 | 0.51 | 36.0 | 2.67e-01 | 73.9% | 28.9% |
| 3503254 | 4007.1.1.0 ↗ | a+b two layers › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins › a+b domain in YebC-like proteins | 0.51 | 44.0 | 4.20e-01 | 100.0% | 98.8% |
| 5001322 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.50 | 34.0 | 2.94e-01 | 100.0% | 42.6% |