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MT024870.1__QIN94481.1__SEA_WHYTU_12__00012
Bact-VirMT024870.1__QIN94481.1__SEA_WHYTU_12__00012
Identity
- Accession:
- MT024870 ↗
- Kingdom:
- phage
Quality
67.6
mean pLDDT
Taxonomy
TaxID: 2713260
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-145
Domain cluster:
rep: LR990834.1__CAD7757509.1__ATHO_20__00020__D167-317
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01551.30 best | Peptidase_M23 | 74.3 | 1.00e-20 | 80.7% | 93.8% |
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2hsiB02 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.94 | 71.0 | 6.86e-01 | 100.0% | 71.2% |
| 4bh5A00 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.93 | 75.0 | 7.67e-01 | 100.0% | 85.4% |
| 7qrlA01 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.90 | 75.0 | 7.60e-01 | 100.0% | 86.7% |
| 1qwyA02 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.90 | 75.0 | 6.77e-01 | 100.0% | 67.4% |
| 2gu1A03 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.89 | 75.0 | 7.60e-01 | 100.0% | 87.9% |
| 6jn7A01 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.89 | 74.0 | 6.68e-01 | 100.0% | 66.3% |
| 4rnyA03 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.86 | 70.0 | 7.23e-01 | 100.0% | 88.3% |
| 3tufB00 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.77 | 71.0 | 6.69e-01 | 100.0% | 82.3% |
| 3it5G00 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.75 | 64.0 | 5.75e-01 | 100.0% | 66.7% |
| 5b0hA00 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.75 | 63.0 | 6.36e-01 | 100.0% | 88.7% |
| 3csqA02 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.71 | 65.0 | 6.00e-01 | 100.0% | 78.7% |
| 3pg7A02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 34.0 | 3.79e-01 | 71.9% | 70.0% |
| 1tolA01 | 2.30.27.10 | Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain | 0.53 | 28.0 | 3.41e-01 | 84.4% | 79.3% |
| 3obaA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 30.0 | 3.50e-01 | 83.0% | 80.9% |
| 3mpxA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 29.0 | 3.39e-01 | 72.6% | 79.4% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3984086 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.94 | 75.0 | 6.46e-01 | 100.0% | 56.9% |
| 3290826 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.94 | 75.0 | 6.88e-01 | 100.0% | 67.1% |
| 4379172 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.93 | 73.0 | 7.39e-01 | 100.0% | 81.2% |
| 3056400 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.93 | 75.0 | 7.61e-01 | 100.0% | 84.7% |
| 3965283 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.92 | 72.0 | 7.60e-01 | 100.0% | 88.6% |
| 4371098 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.91 | 69.0 | 7.37e-01 | 100.0% | 87.5% |
| 3966112 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.91 | 76.0 | 6.78e-01 | 100.0% | 65.7% |
| 3590598 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.91 | 75.0 | 7.62e-01 | 100.0% | 86.5% |
| 1513000 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.91 | 70.0 | 6.33e-01 | 100.0% | 61.8% |
| 4416013 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.90 | 77.0 | 7.17e-01 | 100.0% | 74.4% |
| 3974471 | 325.1.6.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif | 0.90 | 75.0 | 7.50e-01 | 100.0% | 85.2% |
| None | — | 0.89 | 75.0 | 7.60e-01 | 100.0% | 86.7% | |
| 4471307 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.89 | 76.0 | 7.41e-01 | 100.0% | 81.9% |
| 2573963 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.89 | 74.0 | 6.51e-01 | 100.0% | 62.4% |
| 4032307 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.89 | 78.0 | 7.71e-01 | 100.0% | 87.1% |
| 3387971 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.89 | 75.0 | 6.71e-01 | 100.0% | 66.9% |
| 2774289 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.88 | 74.0 | 6.89e-01 | 100.0% | 71.8% |
| 3386468 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.88 | 74.0 | 6.85e-01 | 100.0% | 70.9% |
| 4034361 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.87 | 72.0 | 7.26e-01 | 100.0% | 85.9% |
| 2663449 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.86 | 72.0 | 7.35e-01 | 100.0% | 89.2% |
| 3385726 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.86 | 74.0 | 6.07e-01 | 100.0% | 54.1% |
| 1891424 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.84 | 68.0 | 7.22e-01 | 97.0% | 92.6% |
| 3968533 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.81 | 73.0 | 6.98e-01 | 100.0% | 83.3% |
| 3966987 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.81 | 75.0 | 6.98e-01 | 100.0% | 80.5% |
| 1907311 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.80 | 72.0 | 7.01e-01 | 100.0% | 86.4% |
| 216296 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.77 | 71.0 | 6.69e-01 | 100.0% | 82.3% |
| 5073481 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.77 | 72.0 | 6.02e-01 | 100.0% | 90.5% |
| 2774531 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.76 | 72.0 | 6.64e-01 | 100.0% | 86.4% |
| 1877223 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.76 | 63.0 | 6.42e-01 | 100.0% | 88.7% |
| 3961687 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.75 | 72.0 | 6.06e-01 | 100.0% | 90.0% |
| 119413 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.75 | 64.0 | 5.71e-01 | 100.0% | 65.9% |
| 5034238 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.75 | 71.0 | 6.38e-01 | 100.0% | 90.0% |
| 3895927 | 325.1.6.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif | 0.75 | 63.0 | 6.37e-01 | 100.0% | 88.1% |
| 4563644 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.75 | 65.0 | 5.84e-01 | 100.0% | 68.5% |
| 5018327 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.75 | 71.0 | 6.40e-01 | 100.0% | 91.4% |
| 4941596 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.74 | 71.0 | 6.40e-01 | 100.0% | 88.0% |
| 4931567 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.74 | 70.0 | 6.15e-01 | 100.0% | 83.2% |
| 5079376 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.73 | 69.0 | 6.20e-01 | 100.0% | 76.4% |
| 5078228 | 325.1.6.2 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › Peptidase_M23 | 0.72 | 68.0 | 6.34e-01 | 100.0% | 83.1% |
| 1173319 | 325.1.6.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif | 0.71 | 65.0 | 6.03e-01 | 100.0% | 79.6% |
| 4658045 | 325.1.6.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif | 0.71 | 65.0 | 5.49e-01 | 100.0% | 62.3% |
| 3958847 | 325.1.6.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif | 0.67 | 63.0 | 5.66e-01 | 100.0% | 90.6% |
| 3928836 | 325.1.6.6 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PF26730 | 0.66 | 62.0 | 5.81e-01 | 100.0% | 86.3% |
| 4317378 | 325.1.6.4 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Duplicated hybrid motif › PS_Dcarbxylase | 0.59 | 55.0 | 4.45e-01 | 100.0% | 69.4% |
| 4967905 | 236.3.1.1 ↗ | beta barrels › GroES-like › AF1531-like › AF1531-like › DUF655 | 0.58 | 35.0 | 4.22e-01 | 70.4% | 94.1% |
| 5081813 | 325.1.7.38 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif › PS_Dcarbxylase | 0.58 | 54.0 | 5.20e-01 | 100.0% | 90.0% |
| 3206439 | 220.1.1.30 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BEACH | 0.55 | 39.0 | 3.75e-01 | 74.8% | 78.1% |
| 3583844 | 220.1.1.30 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BEACH | 0.55 | 39.0 | 3.82e-01 | 74.1% | 79.3% |
| 5054252 | 236.3.1.0 ↗ | beta barrels › GroES-like › AF1531-like › AF1531-like | 0.53 | 34.0 | 4.05e-01 | 70.4% | 98.9% |
| 3266298 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.51 | 34.0 | 3.49e-01 | 72.6% | 68.7% |
| 3173368 | 220.1.1.244 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PF31261 | 0.50 | 34.0 | 3.42e-01 | 77.8% | 66.4% |
| 3197669 | 220.1.1.188 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_BUD3_C | 0.50 | 37.0 | 3.50e-01 | 77.8% | 72.7% |
D2
medium
residues 168-267