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MT028491.1__QIG65707.1__phiOC_p041__00041
Bact-VirMT028491.1__QIG65707.1__phiOC_p041__00041
Identity
- Accession:
- MT028491 ↗
- Kingdom:
- phage
Quality
71.0
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Ochrobactrum_phage_vB_OspM_OC
TaxID: 2712956
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-88
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6b9tF01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.67 | 44.0 | 3.93e-01 | 90.8% | 46.4% |
| 2oyzA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.67 | 41.0 | 4.06e-01 | 94.3% | 56.4% |
| 1j3qB00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 45.0 | 3.59e-01 | 96.6% | 33.9% |
| 1qlbA04 | 3.10.20.820 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.66 | 32.0 | 3.19e-01 | 92.0% | 43.6% |
| 3h8uA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 44.0 | 3.93e-01 | 100.0% | 48.4% |
| 2bnmA02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.65 | 43.0 | 3.91e-01 | 95.4% | 49.2% |
| 1ibyA00 | 2.60.40.420 | Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins | 0.65 | 46.0 | 4.30e-01 | 93.1% | 58.9% |
| 5by5A00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.64 | 40.0 | 3.72e-01 | 97.7% | 47.8% |
| 3winE03 | 2.60.120.1090 | Mainly Beta › Sandwich › Jelly Rolls › | 0.63 | 50.0 | 4.67e-01 | 96.6% | 68.2% |
| 2opkB01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.63 | 42.0 | 4.13e-01 | 97.7% | 62.8% |
| 2cm5A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.63 | 54.0 | 4.68e-01 | 97.7% | 76.9% |
| 1ds1A00 | 3.60.130.10 | Alpha Beta › 4-Layer Sandwich › Double-stranded beta-helix › Clavaminate synthase-like | 0.62 | 45.0 | 3.10e-01 | 78.2% | 56.3% |
| 2dmgA00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.61 | 53.0 | 4.53e-01 | 97.7% | 72.5% |
| 3hcyA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.61 | 53.0 | 4.52e-01 | 97.7% | 99.3% |
| 2rhqB06 | 3.30.70.380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ferrodoxin-fold anticodon-binding domain | 0.60 | 44.0 | 4.53e-01 | 97.7% | 80.7% |
| 1pu1A00 | 3.30.300.100 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like | 0.60 | 50.0 | 5.01e-01 | 100.0% | 87.9% |
| 3anwA02 | 3.40.5.50 | Alpha Beta › 3-Layer(aba) Sandwich › Ribosomal Protein L9; domain 1 › | 0.60 | 35.0 | 4.09e-01 | 95.4% | 86.2% |
| 1wapA00 | 2.60.40.50 | Mainly Beta › Sandwich › Immunoglobulin-like › TRAP-like | 0.59 | 41.0 | 4.47e-01 | 95.4% | 91.2% |
| 4bwiB01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.59 | 51.0 | 4.02e-01 | 98.9% | 86.5% |
| 3mmhA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.59 | 50.0 | 4.15e-01 | 98.9% | 82.0% |
| 6p58A00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.58 | 49.0 | 4.24e-01 | 100.0% | 99.3% |
| 1r6vA01 | 2.60.40.1800 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 45.0 | 4.05e-01 | 98.9% | 61.6% |
| 2k31A00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.56 | 46.0 | 3.97e-01 | 93.1% | 100.0% |
| 4gw9A01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.56 | 49.0 | 3.65e-01 | 96.6% | 76.7% |
| 3eeaA00 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.54 | 48.0 | 3.96e-01 | 97.7% | 94.1% |
| 6uv8A01 | 3.30.450.40 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › GAF domain | 0.54 | 46.0 | 3.77e-01 | 100.0% | 89.4% |
| 2fcbA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 40.0 | 4.08e-01 | 100.0% | 83.9% |
| 4fdtB00 | 3.40.50.1240 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like | 0.53 | 39.0 | 2.54e-01 | 77.0% | 93.4% |
| 4jgwA01 | 1.20.870.10 | Mainly Alpha › Up-down Bundle › Son of sevenless (SoS) protein; Chain S, domain 1 › Son of sevenless (SoS) protein Chain: S domain 1 | 0.53 | 42.0 | 3.45e-01 | 83.9% | 54.5% |
| 2q0oA01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.52 | 44.0 | 3.62e-01 | 96.6% | 89.3% |
| 3bc8A03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.52 | 40.0 | 3.42e-01 | 81.6% | 87.7% |
| 6lmjB00 | 4.10.520.10 | Few Secondary Structures › Irregular › HU Protein; Chain A › IHF-like DNA-binding proteins | 0.51 | 31.0 | 2.97e-01 | 81.6% | 53.1% |
| 2eo4A00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.51 | 40.0 | 3.38e-01 | 85.1% | 76.5% |
| 2frgP00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 43.0 | 4.05e-01 | 96.6% | 86.8% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3233137 | 11.1.4.71 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › NOMO1-like_7th | 0.68 | 48.0 | 5.25e-01 | 85.1% | 92.9% |
| 3888327 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.68 | 51.0 | 5.16e-01 | 85.1% | 81.2% |
| 4945638 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.66 | 45.0 | 4.48e-01 | 90.8% | 67.8% |
| 3216934 | 12.1.1.35 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › Melibiase_C | 0.65 | 43.0 | 4.16e-01 | 72.4% | 59.0% |
| 3224117 | 11.1.4.55 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Self-incomp_S1 | 0.62 | 49.0 | 4.70e-01 | 96.6% | 73.3% |
| 3309892 | 11.1.4.71 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › NOMO1-like_7th | 0.60 | 46.0 | 4.80e-01 | 83.9% | 96.2% |
| 5013970 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.60 | 50.0 | 4.09e-01 | 97.7% | 47.4% |
| 4015053 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.59 | 51.0 | 4.72e-01 | 95.4% | 94.5% |
| 3306478 | 11.1.4.55 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › Self-incomp_S1 | 0.58 | 51.0 | 4.78e-01 | 100.0% | 86.4% |
| 4024341 | 883.1.1.6 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1_N | 0.58 | 53.0 | 4.18e-01 | 100.0% | 89.1% |
| 4932593 | 4076.3.1.5 ↗ | a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › Gins51_C | 0.58 | 34.0 | 4.11e-01 | 95.4% | 100.0% |
| 3786083 | 207.1.1.0 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats | 0.57 | 39.0 | 2.58e-01 | 73.6% | 24.9% |
| 3704230 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.56 | 42.0 | 3.95e-01 | 100.0% | 63.6% |
| 3504023 | 883.1.1.2 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP_C | 0.56 | 50.0 | 3.64e-01 | 100.0% | 63.2% |
| 3607911 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.55 | 41.0 | 2.85e-01 | 80.5% | 25.2% |
| 3773744 | 883.1.1.1 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like › LBP_BPI_CETP | 0.55 | 45.0 | 3.74e-01 | 92.0% | 86.1% |
| 3938807 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.55 | 45.0 | 4.23e-01 | 100.0% | 72.7% |
| 3961771 | 10.18.1.0 ↗ | beta sandwiches › jelly-roll › VPA0735-like › VPA0735-like | 0.54 | 47.0 | 3.06e-01 | 98.9% | 27.3% |
| 5032669 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 45.0 | 4.50e-01 | 93.1% | 92.2% |
| 4939335 | 140.1.1.9 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon_3 | 0.53 | 48.0 | 3.52e-01 | 100.0% | 97.4% |
| 3997639 | 7563.1.1.0 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related | 0.53 | 46.0 | 3.11e-01 | 94.3% | 29.8% |
| 3407915 | 4.1.3.2 ↗ | beta barrels › SH3 › SH3 › Calcium-binding protein CcbP › SHCBP_N | 0.53 | 41.0 | 3.64e-01 | 88.5% | 73.6% |
| 3925323 | 10.12.1.12 ↗ | beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › TauD | 0.53 | 46.0 | 3.23e-01 | 100.0% | 81.3% |
| 3290343 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 36.0 | 3.89e-01 | 72.4% | 88.6% |
| 165514 | 331.12.1.1 ↗ | a+b two layers › TBP-like › YugN-like › YugN-like › YugN | 0.51 | 44.0 | 4.08e-01 | 97.7% | 89.3% |