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MT028491.1__QIG65715.1__phiOC_p049__00049

Bact-Vir

MT028491.1__QIG65715.1__phiOC_p049__00049

Identity

Accession:
MT028491 ↗
Kingdom:
phage

Quality

94.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 73-184_337-346
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09215.17 best Phage-Gp8 25.6 8.40e-06 71.3% 17.8%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1n7zA02 2.170.290.10 Mainly Beta › Beta Complex › baseplate structural protein gp8, domain 2 › baseplate structural protein gp8, domain 2 0.79 73.0 6.63e-01 97.5% 98.1%
1b69A00 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.56 28.0 3.56e-01 93.4% 82.6%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5042070 304.28.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain 0.53 24.0 3.10e-01 98.4% 75.4%
3712183 101.1.12.3 alpha arrays › HTH › HTH › HTH motif inserted in other structures › SAS-6_N 0.51 35.0 3.34e-01 70.5% 100.0%
4928787 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.50 29.0 3.44e-01 100.0% 85.0%
D2 high residues 194-332
PDB
Domain cluster: representative
CATH (11)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3bnwB00 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.67 47.0 4.57e-01 72.7% 98.7%
3dclA02 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.66 43.0 5.15e-01 89.2% 100.0%
2lp6A00 2.40.10.190 Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 0.66 43.0 5.18e-01 85.6% 100.0%
1v0fB03 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.62 38.0 4.64e-01 89.2% 100.0%
3kbgA03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 27.0 3.96e-01 73.4% 100.0%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.57 29.0 3.91e-01 77.0% 94.4%
1vq8T00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.53 33.0 3.53e-01 96.4% 70.6%
2kd7A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 33.0 3.19e-01 91.4% 55.3%
1k12A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 33.0 3.18e-01 91.4% 56.3%
3h7jA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 31.0 3.40e-01 93.5% 74.6%
3myxB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.50 29.0 3.07e-01 91.4% 63.1%
ECOD (18)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4026674 11.21.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.76 44.0 5.72e-01 88.5% 100.0%
5036479 1.1.7.9 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.76 44.0 4.97e-01 89.9% 73.6%
3597282 11.21.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.75 44.0 5.64e-01 89.9% 100.0%
3712506 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.73 44.0 5.50e-01 90.6% 97.6%
3964292 1.1.13.38 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_BR0599 0.72 52.0 5.82e-01 95.7% 92.7%
4011239 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.72 42.0 5.33e-01 89.9% 100.0%
4074297 1.1.7.9 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.70 43.0 4.70e-01 87.1% 73.9%
4956344 3613.1.1.0 beta barrels › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain › Protein CLP1 C-terminal domain 0.65 35.0 4.58e-01 77.0% 96.0%
4028468 1.1.7.35 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH 0.64 47.0 5.27e-01 87.1% 100.0%
4521518 1.1.7.121 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Phage_BR0599 0.63 48.0 5.20e-01 96.4% 93.9%
4244186 1.1.7.9 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c 0.62 41.0 4.50e-01 87.1% 80.9%
3741069 4.1.1.314 beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_uL24m-like 0.56 41.0 3.40e-01 77.0% 51.3%
4177510 4.1.1.295 beta barrels › SH3 › SH3 › SH3 › KOW, Ribosomal_L26 0.54 34.0 3.62e-01 99.3% 69.6%
3198544 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.54 42.0 4.65e-01 89.9% 100.0%
3258411 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.53 33.0 3.57e-01 95.7% 73.0%
1281033 1.1.7.33 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › DUF4438 0.53 46.0 4.38e-01 93.5% 85.0%
4026161 4.1.1.7 beta barrels › SH3 › SH3 › SH3 › KOW,ribosomal_L24 0.52 37.0 3.90e-01 74.1% 84.0%
4030043 929.1.1.0 beta duplicates or obligate multimers › Resistin › Resistin › Resistin 0.51 31.0 3.64e-01 90.6% 88.4%
D3 high residues 397-463
PDB
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4zgnB00 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.79 72.0 6.18e-01 100.0% 87.4%
1kjzA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.78 69.0 6.23e-01 100.0% 93.5%
2yweA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.77 66.0 5.73e-01 92.5% 80.0%
2wssA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.76 59.0 5.30e-01 85.1% 60.2%
3qtgA02 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.76 62.0 5.55e-01 89.6% 78.7%
3gqbA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.76 60.0 5.88e-01 85.1% 80.3%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.76 59.0 5.32e-01 85.1% 62.2%
3gg8C03 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.75 62.0 5.45e-01 89.6% 78.4%
7oo1A01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.75 56.0 5.35e-01 79.1% 88.3%
4i86A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.75 57.0 4.96e-01 82.1% 62.7%
2derA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.75 66.0 6.08e-01 100.0% 92.0%
1a3wB03 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.74 60.0 5.31e-01 88.1% 78.4%
6su1D01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.74 55.0 4.97e-01 79.1% 80.0%
7r6yA01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.74 55.0 4.92e-01 79.1% 77.2%
2as9B01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.74 60.0 5.24e-01 89.6% 70.3%
8eq1A01 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.74 55.0 4.99e-01 79.1% 79.5%
3w1eA03 2.40.10.410 Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain 0.73 57.0 5.17e-01 83.6% 86.5%
1b23P03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.72 64.0 5.76e-01 100.0% 96.8%
3t05A02 2.40.33.10 Mainly Beta › Beta Barrel › M1 Pyruvate Kinase; Domain 3 › PK beta-barrel domain-like 0.72 60.0 5.27e-01 91.0% 80.4%
2ey4D00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.71 55.0 5.36e-01 85.1% 82.7%
1txqA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.69 47.0 4.60e-01 70.1% 100.0%
4ac9C04 2.40.10.190 Mainly Beta › Beta Barrel › Thrombin, subunit H › translation elongation factor selb, chain A, domain 4 0.69 55.0 5.21e-01 86.6% 78.8%
1wczA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.69 61.0 5.12e-01 100.0% 74.8%
1vloA04 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.67 58.0 5.33e-01 100.0% 81.3%
2zzeA03 2.40.30.130 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.67 51.0 4.58e-01 83.6% 64.3%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.66 47.0 4.51e-01 74.6% 74.0%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 49.0 4.92e-01 83.6% 100.0%
4odbA00 2.60.90.20 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain 0.62 46.0 3.56e-01 82.1% 81.5%
4e2oA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.59 44.0 4.00e-01 79.1% 80.7%
3nrlA00 2.40.10.390 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.58 41.0 4.11e-01 74.6% 94.1%
1kkeA02 2.60.90.20 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain 0.57 42.0 3.44e-01 82.1% 91.5%
3zpeA00 2.60.90.50 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.56 43.0 3.50e-01 86.6% 50.0%
3bc9A01 2.60.40.1220 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 45.0 4.04e-01 88.1% 94.6%
7plsA02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.55 41.0 3.77e-01 82.1% 89.2%
3q48A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 44.0 4.21e-01 94.0% 81.9%
2dv6A01 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.54 47.0 3.97e-01 97.0% 92.0%
2uzyB04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 40.0 3.87e-01 98.5% 69.6%
3mlpA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 44.0 3.68e-01 98.5% 49.6%
2bseA00 2.60.40.1830 Mainly Beta › Sandwich › Immunoglobulin-like › Phage tail base-plate Siphoviridae RBP, head domain 0.54 40.0 3.55e-01 83.6% 84.1%
1iarB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 45.0 4.02e-01 95.5% 82.3%
2jpeA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.53 45.0 3.67e-01 97.0% 82.6%
2q7nA04 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 46.0 4.05e-01 100.0% 84.2%
4j27A02 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.53 40.0 3.69e-01 83.6% 87.6%
1pbyA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 39.0 3.85e-01 97.0% 73.7%
3vpyA00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.52 45.0 3.53e-01 97.0% 82.1%
5fc9A00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.52 44.0 4.00e-01 97.0% 97.9%
4f2eA00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.52 43.0 3.83e-01 94.0% 83.7%
2eabB03 2.60.40.1180 Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II 0.52 43.0 3.56e-01 94.0% 50.8%
4jonC00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.52 44.0 3.68e-01 95.5% 81.4%
4jcwA02 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.51 42.0 3.93e-01 100.0% 73.3%
6hbeA01 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.51 43.0 3.54e-01 97.0% 69.9%
2ux6A00 2.60.40.420 Mainly Beta › Sandwich › Immunoglobulin-like › Cupredoxins - blue copper proteins 0.51 43.0 3.61e-01 97.0% 72.1%
3n6rA03 3.30.700.30 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.50 38.0 3.20e-01 88.1% 88.0%
ECOD (87)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4556837 1.1.8.0 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.85 78.0 7.70e-01 100.0% 97.1%
3513769 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.81 63.0 6.12e-01 83.6% 77.3%
1171020 1.1.8.4 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C 0.80 72.0 6.38e-01 100.0% 90.6%
5069810 1.1.8.4 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C 0.79 68.0 6.44e-01 95.5% 93.8%
5051090 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.79 62.0 5.87e-01 85.1% 72.5%
161224 1.1.8.4 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C 0.79 70.0 6.15e-01 100.0% 86.0%
4945827 1.1.8.0 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.79 71.0 6.40e-01 100.0% 95.6%
3829837 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.78 64.0 5.37e-01 88.1% 78.2%
4952455 1.1.8.4 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C 0.78 71.0 6.42e-01 100.0% 95.5%
3602123 1.1.8.4 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C 0.78 68.0 6.52e-01 97.0% 96.2%
4994399 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.78 64.0 5.68e-01 89.6% 80.0%
4235076 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.77 61.0 5.77e-01 85.1% 73.8%
3310664 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.77 64.0 5.65e-01 89.6% 78.9%
5078547 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.77 61.0 5.40e-01 85.1% 60.0%
5016579 1.1.8.0 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.77 68.0 6.47e-01 98.5% 96.2%
None 0.77 61.0 3.82e-01 85.1% 17.6%
3172227 7558.1.1.0 a/b three-layered sandwiches › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase › Glycerol-3-phosphate (1)-acyltransferase 0.77 61.0 5.40e-01 85.1% 78.9%
4379635 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.77 62.0 5.51e-01 88.1% 78.9%
4954732 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.77 63.0 5.71e-01 89.6% 78.9%
4943228 1.1.7.146 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_Xtn 0.77 59.0 5.98e-01 82.1% 84.6%
4407497 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.77 59.0 6.06e-01 83.6% 86.2%
5001596 1.1.8.4 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C 0.77 68.0 6.15e-01 98.5% 94.4%
5063794 1.1.8.0 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.76 65.0 6.22e-01 97.0% 92.5%
4245518 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.76 60.0 5.80e-01 85.1% 78.7%
4066146 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.76 60.0 5.15e-01 85.1% 57.1%
2448699 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.76 59.0 5.92e-01 85.1% 82.4%
4337888 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.76 61.0 5.38e-01 88.1% 74.0%
3415703 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.76 61.0 5.39e-01 86.6% 80.0%
3204011 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.76 60.0 5.42e-01 85.1% 63.3%
4203356 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.76 61.0 5.46e-01 88.1% 78.9%
4060488 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.76 60.0 5.65e-01 85.1% 73.8%
1516038 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.76 62.0 5.55e-01 89.6% 78.7%
3504860 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.76 55.0 5.42e-01 76.1% 100.0%
4949379 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.76 62.0 5.37e-01 88.1% 74.0%
4104961 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.76 61.0 5.53e-01 88.1% 82.2%
4880433 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.76 59.0 5.90e-01 85.1% 81.4%
4984743 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.76 63.0 5.59e-01 91.0% 81.1%
3975132 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.76 59.0 5.31e-01 85.1% 62.2%
4972564 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.75 62.0 5.49e-01 89.6% 80.0%
5080901 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.75 58.0 5.51e-01 85.1% 70.0%
3332717 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.75 62.0 5.30e-01 89.6% 78.1%
4251719 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.75 60.0 5.40e-01 88.1% 80.0%
4468653 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.75 61.0 5.47e-01 89.6% 78.9%
5057245 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.75 61.0 5.57e-01 89.6% 77.8%
4880414 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.75 59.0 5.87e-01 85.1% 82.6%
5001027 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.75 61.0 5.51e-01 88.1% 82.2%
3966502 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.75 62.0 5.41e-01 91.0% 78.0%
3644791 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.75 61.0 5.34e-01 89.6% 79.0%
4932128 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.75 60.0 5.57e-01 88.1% 80.0%
4944119 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.74 60.0 5.32e-01 88.1% 80.0%
3822850 1.1.8.4 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C 0.74 64.0 5.71e-01 100.0% 93.0%
3880866 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.74 60.0 5.20e-01 89.6% 74.3%
3281973 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.74 60.0 5.37e-01 89.6% 80.0%
4668791 1.1.8.4 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › eIF2_C 0.74 64.0 5.56e-01 100.0% 80.0%
4192745 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.74 60.0 5.35e-01 89.6% 81.1%
1758803 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.73 58.0 5.93e-01 86.6% 95.3%
3386080 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.73 59.0 5.15e-01 88.1% 80.0%
4939535 284.4.1.0 a+b two layers › FKBP-like › Archaeal FKBP insertion domain › Archaeal FKBP insertion domain 0.73 49.0 4.58e-01 70.1% 65.9%
3481480 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.73 59.0 5.15e-01 88.1% 80.0%
5072694 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.73 58.0 5.41e-01 88.1% 81.2%
1515984 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.73 59.0 5.21e-01 89.6% 79.0%
5050004 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.73 55.0 5.02e-01 82.1% 78.9%
4272870 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.72 59.0 5.26e-01 89.6% 80.0%
5015359 1.1.15.0 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.72 58.0 5.37e-01 88.1% 75.3%
4125814 1.1.7.17 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.70 54.0 5.30e-01 85.1% 77.3%
1688248 1.1.8.0 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.70 61.0 5.82e-01 100.0% 91.1%
3889858 1.1.8.20 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › Beta-barrel_CAF17_C 0.69 60.0 5.70e-01 100.0% 82.5%
3963908 1.1.8.0 beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.69 60.0 5.92e-01 100.0% 94.3%
5008884 1.1.15.1 beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like › PK 0.69 57.0 5.25e-01 91.0% 77.6%
4949095 2004.1.1.10 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATP-synt_ab 0.67 60.0 3.70e-01 100.0% 81.7%
3742052 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.57 45.0 4.19e-01 85.1% 96.5%
5043602 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 46.0 4.16e-01 91.0% 92.6%
4933989 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 43.0 3.75e-01 85.1% 70.0%
3275452 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 47.0 4.13e-01 100.0% 70.0%
3885325 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.56 47.0 4.30e-01 98.5% 78.9%
5082706 10.29.1.2 beta sandwiches › jelly-roll › Jelly-roll domain in distal tail protein (Dit)-like proteins › Jelly-roll domain in distal tail protein (Dit)-like proteins › Siphovirus-type_tail_C 0.56 44.0 3.73e-01 89.6% 90.0%
3251889 11.1.1.820 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-sand_ComC_2nd 0.55 47.0 4.39e-01 100.0% 80.0%
3260358 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 46.0 4.25e-01 98.5% 80.0%
3250137 11.1.1.820 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-sand_ComC_2nd 0.54 45.0 4.25e-01 98.5% 80.0%
3508187 11.1.1.892 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_F54D1_6 0.54 46.0 4.31e-01 98.5% 81.2%
3248013 11.1.1.29 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.54 45.0 4.27e-01 98.5% 76.5%
3266894 11.1.1.820 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Beta-sand_ComC_2nd 0.54 44.0 4.18e-01 98.5% 82.4%
3936013 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 44.0 4.05e-01 98.5% 73.7%
3255501 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 45.0 4.12e-01 98.5% 69.5%
3265135 3156.1.1.0 beta sandwiches › Cupredoxin-like › Cupredoxin-related › Cupredoxin-related 0.53 44.0 4.12e-01 94.0% 96.5%
3273159 11.21.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.53 45.0 4.09e-01 97.0% 82.1%
4348176 11.1.1.171 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_5 0.51 42.0 3.63e-01 97.0% 89.6%
D4 medium residues 13-24_352-379_465-499
PDB
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1n7zA01 2.60.340.10 Mainly Beta › Sandwich › baseplate structural protein gp8, domain 1 › baseplate structural protein gp8, domain 1 0.88 82.0 6.18e-01 100.0% 95.2%
4zxeC00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.61 42.0 3.52e-01 90.7% 40.4%
2f1eA00 2.60.40.1470 Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain 0.60 46.0 4.00e-01 100.0% 54.3%
3m70A01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 34.0 3.10e-01 81.3% 40.6%
3l9bA00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.58 39.0 3.37e-01 100.0% 42.1%
1wapA00 2.60.40.50 Mainly Beta › Sandwich › Immunoglobulin-like › TRAP-like 0.57 33.0 3.50e-01 80.0% 63.2%
2yc2A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 39.0 3.31e-01 89.3% 41.7%
2kutA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 41.0 3.79e-01 98.7% 57.5%
2x41A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 43.0 3.72e-01 98.7% 54.6%
5y4mA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 41.0 3.38e-01 90.7% 42.0%
5ftzA00 2.70.50.50 Mainly Beta › Distorted Sandwich › Coagulation Factor XIII; Chain A, domain 1 › chitin-binding protein cbp21 0.54 44.0 3.45e-01 94.7% 40.1%
4ypjA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 42.0 3.65e-01 98.7% 53.8%
2yrbA01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.53 39.0 3.27e-01 100.0% 44.4%
7jnfA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.52 40.0 3.23e-01 89.3% 39.4%
2orzA01 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.51 41.0 3.33e-01 92.0% 44.2%
3r5dA01 3.30.70.2010 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 33.0 2.76e-01 94.7% 38.0%
1xf1A03 2.60.40.1710 Mainly Beta › Sandwich › Immunoglobulin-like › Subtilisin-like superfamily 0.50 42.0 3.53e-01 93.3% 54.2%
2zyrA02 2.60.40.2190 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 36.0 3.44e-01 90.7% 62.8%
1s55A00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.50 42.0 3.47e-01 100.0% 75.6%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2504393 3899.1.1.2 beta complex topology › Baseplate structural protein gp8 › Baseplate structural protein gp8 › Baseplate structural protein gp8 › BW3TFN 0.74 68.0 5.06e-01 100.0% 90.6%
5069287 11.1.1.103 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.63 48.0 4.26e-01 100.0% 56.4%
5070734 11.1.1.103 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.63 43.0 3.84e-01 84.0% 49.1%
5080451 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 44.0 4.07e-01 98.7% 61.1%
5069414 11.1.1.103 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.59 43.0 3.88e-01 98.7% 53.6%
5068866 11.1.1.103 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.59 44.0 3.95e-01 98.7% 55.5%
5052821 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 43.0 3.91e-01 93.3% 57.1%
3598717 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 45.0 3.91e-01 98.7% 53.3%
5060774 11.1.1.103 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.58 47.0 4.08e-01 98.7% 58.3%
5060724 11.1.1.2 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.57 44.0 4.16e-01 98.7% 67.4%
3928219 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 43.0 4.04e-01 94.7% 66.7%
4945416 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 47.0 3.54e-01 94.7% 36.8%
4448377 11.1.1.203 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › LacZ_4 0.56 39.0 3.60e-01 84.0% 55.0%
5012903 1.1.7.141 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MazE_antitoxin 0.56 42.0 3.82e-01 80.0% 69.0%
138652 11.1.1.103 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB 0.56 41.0 3.69e-01 98.7% 53.0%
4115142 11.1.1.63 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRAP_alpha 0.56 45.0 3.64e-01 94.7% 44.5%
3456459 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 48.0 3.74e-01 98.7% 47.1%
4537297 11.1.1.63 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRAP_alpha 0.55 48.0 3.85e-01 98.7% 53.0%
3576125 10.32.1.28 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Sad1_UNC 0.54 46.0 3.38e-01 97.3% 66.0%
4953107 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 41.0 3.72e-01 98.7% 59.6%
3752559 10.32.1.28 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › Sad1_UNC 0.54 46.0 3.40e-01 97.3% 69.8%
5065313 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 42.0 3.76e-01 94.7% 59.1%
4943656 1.1.2.0 beta barrels › cradle loop barrel › RIFT-related › double psi 0.53 40.0 3.17e-01 82.7% 77.6%
3496231 11.2.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.53 44.0 3.65e-01 93.3% 96.4%
3788778 11.1.1.41 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C 0.53 45.0 3.44e-01 97.3% 56.2%
4979750 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 44.0 3.64e-01 98.7% 53.1%
3251815 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 42.0 3.63e-01 90.7% 61.3%
3719095 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 39.0 3.14e-01 84.0% 85.6%
3606397 3529.1.1.1 beta sandwiches › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Major vault protein (MVP) structural repeat domain › Vault 0.51 35.0 3.68e-01 92.0% 77.1%
3975548 11.1.1.833 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF2195 0.51 40.0 3.59e-01 89.3% 82.3%
5022099 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 39.0 3.47e-01 84.0% 60.0%
4943025 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.51 40.0 3.54e-01 98.7% 58.3%
3702304 11.2.1.1 beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 0.50 39.0 3.26e-01 100.0% 45.5%
D5 medium residues 25-71_380-396
PDB
Domain cluster: representative
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1n7zA01 2.60.340.10 Mainly Beta › Sandwich › baseplate structural protein gp8, domain 1 › baseplate structural protein gp8, domain 1 0.89 83.0 5.93e-01 100.0% 67.9%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3586876 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.54 31.0 2.84e-01 92.2% 43.5%
3588305 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 33.0 2.96e-01 95.3% 44.9%
3656918 213.1.1.1 a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.51 44.0 3.03e-01 100.0% 28.3%