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MT028491.1__QIG65746.1__phiOC_p081__00080

Bact-Vir

MT028491.1__QIG65746.1__phiOC_p081__00080

Identity

Accession:
MT028491 ↗
Kingdom:
phage

Quality

68.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Ochrobactrum_phage_vB_OspM_OC

TaxID: 2712956

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 2-83
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6s2wA01 3.30.2260.10 Alpha Beta › 2-Layer Sandwich › ERH-like fold › Enhancer of rudimentary 0.82 63.0 6.34e-01 80.5% 100.0%
1wh2A01 3.30.1490.40 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain 0.61 41.0 4.56e-01 80.5% 93.4%
3aeiA00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.60 44.0 4.25e-01 78.0% 76.6%
1u7kA00 1.10.375.10 Mainly Alpha › Orthogonal Bundle › Human Immunodeficiency Virus Type 1 Capsid Protein › Human Immunodeficiency Virus Type 1 Capsid Protein 0.59 40.0 3.47e-01 72.0% 87.8%
2g5gX01 3.40.50.11550 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.57 41.0 3.11e-01 89.0% 31.6%
4msxA01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.54 33.0 3.18e-01 73.2% 51.6%
2cklA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.51 32.0 3.09e-01 74.4% 53.1%
5lltA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.51 35.0 2.60e-01 82.9% 28.3%
ECOD (14)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4971897 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.60 36.0 3.47e-01 91.5% 50.5%
4027404 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.59 42.0 4.01e-01 74.4% 67.4%
3781456 5050.1.1.14 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › ATG22 0.59 52.0 3.77e-01 100.0% 80.4%
4405873 223.2.1.33 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like › Fuz_longin_3 0.57 40.0 3.61e-01 73.2% 92.2%
4961283 101.1.2.935 ↗ alpha arrays › HTH › HTH › winged helix domain › HVO_B0008_C 0.57 44.0 4.02e-01 82.9% 95.4%
4954786 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.56 40.0 4.04e-01 75.6% 85.9%
3938199 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.55 50.0 3.84e-01 98.8% 51.4%
3596846 4992.1.1.0 ↗ extended segments › RelB-like › RelB-like › RelB-like 0.54 39.0 3.25e-01 75.6% 49.7%
3597083 650.1.1.1 ↗ alpha bundles › Chaperone J-domain › Chaperone J-domain › Chaperone J-domain › DnaJ 0.54 40.0 3.78e-01 81.7% 83.8%
5036280 205.1.1.16 ↗ a+b two layers › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › 4Fe-4S ferredoxin › Fer4_7 0.54 43.0 3.67e-01 87.8% 76.3%
4587586 10.12.1.15 ↗ beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › ARD 0.52 36.0 2.78e-01 70.7% 77.2%
3202709 223.1.1.0 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains 0.51 38.0 3.03e-01 76.8% 54.4%
5074894 2003.1.5.1 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DNA_methylase 0.51 37.0 2.62e-01 100.0% 22.9%
3833867 376.1.1.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 0.51 37.0 3.57e-01 79.3% 85.3%
D2 medium residues 101-143
PDB