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MT028491.1__QIG65880.1__phiOC_p215__00214

Bact-Vir

MT028491.1__QIG65880.1__phiOC_p215__00214

Identity

Accession:
MT028491 ↗
Kingdom:
phage

Quality

85.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Ochrobactrum_phage_vB_OspM_OC

TaxID: 2712956

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 10-87
PDB
Domain cluster: representative
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3i7dA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.59 33.0 2.64e-01 97.4% 26.1%
5wfiA01 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.57 38.0 3.34e-01 88.5% 44.6%
3wknF00 6.20.50.120 Special › Other non-globular › N-terminal domain of TfIIb › 0.57 27.0 3.26e-01 100.0% 69.6%
4fxdA05 3.90.1600.10 Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain 0.56 48.0 4.30e-01 98.7% 76.9%
1f6fB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 39.0 3.70e-01 100.0% 60.8%
1sxvA00 3.90.80.10 Alpha Beta › Alpha-Beta Complex › Inorganic Pyrophosphatase › Inorganic pyrophosphatase 0.55 45.0 3.54e-01 92.3% 43.1%
5dn6I00 2.60.15.10 Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.55 32.0 3.27e-01 100.0% 58.7%
2covG00 2.60.40.2450 Mainly Beta › Sandwich › Immunoglobulin-like › Beta-1,3-xylanase, CBM31 domain 0.54 35.0 3.45e-01 100.0% 59.1%
2rp4A00 6.10.280.60 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Transcription factor p53, C-terminal domain 0.51 39.0 4.04e-01 100.0% 88.7%
2qggA01 2.40.30.60 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM 0.50 33.0 3.18e-01 91.0% 55.9%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1560731 11.1.1.357 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › MtxA_IG-like 0.66 43.0 4.22e-01 100.0% 61.2%
4951815 230.1.1.3 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS 0.63 57.0 4.73e-01 100.0% 75.6%
5065982 75.1.1.0 ↗ beta barrels › Cyclophilin-like › Cyclophilin-like › Cyclophilin-like 0.61 51.0 4.24e-01 92.3% 97.8%
5018772 304.55.2.0 ↗ a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Transposase IS200-like 0.60 52.0 4.93e-01 98.7% 92.6%
3740918 11.1.1.646 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TRP_N 0.59 54.0 4.40e-01 100.0% 61.4%
3811561 109.4.1.1267 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif 0.59 38.0 2.17e-01 80.8% 6.6%
3462080 109.4.1.1383 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, Eplus_motif, E_motif 0.59 38.0 2.39e-01 80.8% 13.2%
3624585 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 34.0 3.96e-01 85.9% 100.0%
3382877 109.4.1.3024 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, Eplus_motif 0.56 37.0 2.29e-01 80.8% 11.7%
3929338 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 43.0 3.98e-01 100.0% 65.0%
4604058 10.37.1.1 ↗ beta sandwiches › jelly-roll › TerD › TerD › TerD 0.52 47.0 3.58e-01 100.0% 62.0%