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MT028491.1__QIG65992.1__phiOC_p350__00326
Bact-VirMT028491.1__QIG65992.1__phiOC_p350__00326
Identity
- Accession:
- MT028491 ↗
- Kingdom:
- phage
Quality
81.4
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Ochrobactrum_phage_vB_OspM_OC
TaxID: 2712956
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-53
Domain cluster:
representative
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6aikB00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.68 | 57.0 | 3.61e-01 | 100.0% | 88.3% |
| 1cf7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.65 | 53.0 | 4.60e-01 | 94.3% | 58.5% |
| 2qkbA00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.59 | 52.0 | 3.70e-01 | 96.2% | 40.1% |
| 2vz8A07 | 3.90.180.10 | Alpha Beta › Alpha-Beta Complex › Quinone Oxidoreductase; Chain A, domain 1 › Medium-chain alcohol dehydrogenases, catalytic domain | 0.56 | 45.0 | 2.77e-01 | 92.5% | 26.2% |
| 5b7cA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 40.0 | 3.22e-01 | 79.2% | 37.8% |
| 1d5rA01 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.54 | 41.0 | 2.86e-01 | 83.0% | 39.7% |
| 1e2jA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 42.0 | 2.61e-01 | 86.8% | 92.2% |
| 7apeB01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 45.0 | 3.12e-01 | 100.0% | 29.8% |
| 4cvhA01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.52 | 42.0 | 2.79e-01 | 92.5% | 86.3% |
| 3v7pA02 | 3.20.20.140 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases | 0.51 | 39.0 | 2.42e-01 | 83.0% | 18.3% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3997820 | 2484.1.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H | 0.87 | 41.0 | 2.87e-01 | 100.0% | 16.8% |
| 4970820 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.70 | 56.0 | 4.25e-01 | 94.3% | 38.3% |
| 5025138 | 101.1.10.80 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Zn_Ribbon_TF | 0.68 | 48.0 | 3.25e-01 | 94.3% | 20.0% |
| 4188943 | 2004.1.1.60 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI | 0.63 | 54.0 | 3.69e-01 | 96.2% | 27.2% |
| 4979350 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.63 | 52.0 | 3.92e-01 | 94.3% | 39.2% |
| 3629019 | 2484.1.1.67 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 | 0.63 | 55.0 | 3.99e-01 | 96.2% | 45.7% |
| 3925433 | 2484.1.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H | 0.62 | 37.0 | 2.87e-01 | 77.4% | 27.8% |
| 3915807 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.61 | 49.0 | 3.00e-01 | 86.8% | 32.2% |
| 5081088 | 101.1.2.932 ↗ | alpha arrays › HTH › HTH › winged helix domain › wHTH-PRTase_assc | 0.60 | 51.0 | 4.30e-01 | 90.6% | 77.1% |
| 3940020 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.60 | 50.0 | 3.79e-01 | 92.5% | 44.6% |
| 3797946 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.60 | 53.0 | 3.92e-01 | 100.0% | 46.4% |
| 3482477 | 2484.1.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H | 0.59 | 54.0 | 3.85e-01 | 100.0% | 40.7% |
| 3736172 | 2484.1.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H | 0.59 | 44.0 | 3.00e-01 | 79.2% | 66.7% |
| 3400686 | 2484.1.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H | 0.58 | 52.0 | 3.62e-01 | 100.0% | 37.1% |
| 4929178 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.58 | 43.0 | 2.95e-01 | 96.2% | 21.5% |
| 5059555 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.58 | 51.0 | 3.07e-01 | 100.0% | 44.3% |
| 3952752 | 639.2.1.0 ↗ | alpha arrays › HHA-like › Regulator of acid resistance influenced by indole (AriR) › Regulator of acid resistance influenced by indole (AriR) | 0.57 | 45.0 | 3.99e-01 | 100.0% | 60.0% |
| 4984581 | 283.1.1.0 ↗ | a+b duplicates or obligate multimers › Creatinase/aminopeptidase-like › Creatinase/aminopeptidase › Creatinase/aminopeptidase | 0.57 | 51.0 | 3.59e-01 | 100.0% | 34.5% |
| 3794234 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.57 | 40.0 | 4.03e-01 | 86.8% | 74.5% |
| 3782472 | 2484.1.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H | 0.56 | 50.0 | 3.48e-01 | 100.0% | 41.1% |
| 3211131 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 44.0 | 3.26e-01 | 88.7% | 40.0% |
| 3736225 | 2484.1.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H | 0.54 | 45.0 | 3.33e-01 | 94.3% | 39.3% |
| 2044880 | 7552.1.1.1 ↗ | a/b three-layered sandwiches › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase signature (AS) enzymes › Amidase | 0.54 | 48.0 | 2.81e-01 | 100.0% | 34.5% |
| 3923456 | 2484.1.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H | 0.54 | 45.0 | 3.24e-01 | 100.0% | 62.9% |
| 4011436 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 46.0 | 3.35e-01 | 100.0% | 45.6% |
| 4284812 | 2484.1.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H | 0.53 | 45.0 | 3.20e-01 | 94.3% | 36.9% |
| 3924175 | 2484.1.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H | 0.53 | 47.0 | 3.26e-01 | 100.0% | 32.0% |
| 3498714 | 241.15.1.3 ↗ | a+b two layers › Type III secretory system chaperone-like › FP (Fbxo7/PI31) dimerization domain › FP (Fbxo7/PI31) dimerization domain › SPC25 | 0.53 | 43.0 | 3.33e-01 | 88.7% | 57.4% |
| 4382913 | 2484.1.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H | 0.53 | 47.0 | 3.42e-01 | 100.0% | 37.3% |
| 3618049 | 2484.1.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H | 0.53 | 46.0 | 3.14e-01 | 96.2% | 87.0% |
| 3686290 | 2484.1.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H | 0.53 | 45.0 | 2.94e-01 | 92.5% | 43.8% |
| 4944614 | 1075.3.1.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type I ABC importer transmembrane domain fold › Type I ABC importer transmembrane domain fold › BPD_transp_1 | 0.53 | 43.0 | 2.77e-01 | 100.0% | 31.6% |
| 5051285 | 101.1.10.3 ↗ | alpha arrays › HTH › HTH › Cyclin-like › TFIIB | 0.53 | 40.0 | 2.92e-01 | 86.8% | 50.3% |
| 4093657 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.53 | 37.0 | 2.74e-01 | 77.4% | 28.9% |
| 4013328 | 2484.1.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H | 0.52 | 43.0 | 2.98e-01 | 98.1% | 33.7% |
| 4502537 | 2484.1.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H | 0.52 | 46.0 | 3.15e-01 | 100.0% | 46.3% |
| 4019817 | 101.1.2.502 ↗ | alpha arrays › HTH › HTH › winged helix domain › PF25880 | 0.52 | 38.0 | 3.10e-01 | 100.0% | 39.1% |
| 3575456 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.52 | 42.0 | 3.60e-01 | 92.5% | 83.3% |
| 4465300 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.51 | 40.0 | 3.58e-01 | 98.1% | 63.3% |
| 4133362 | 632.11.1.6 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like › Yae1_N | 0.51 | 41.0 | 3.58e-01 | 100.0% | 55.8% |
| 4591841 | 2003.1.1.3 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › adh_short | 0.50 | 40.0 | 2.62e-01 | 98.1% | 83.1% |
| 4270370 | 2484.1.1.4 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_H | 0.50 | 43.0 | 3.06e-01 | 98.1% | 38.2% |
D2
high
residues 64-127
Domain cluster:
rep: OP714164.2__UZS00905.1__X__00097__D2-56