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QIM61631.1

Arc-Vir

MT047590__QIM61631.1__X__00026

Identity

Accession:
MT047590 ↗
Protein ID:
QIM61631.1 ↗
Kingdom:
archaea

Quality

86.6 mean pLDDT

Taxonomy

Globuloviridae› Alphaglobulovirus› Thermoproteus_spherical_piliferous_virus_1

TaxID: 2713157

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-94
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF22415.2 best PSV_ORF131-like_dom 127.8 1.70e-37 80.7% 91.2%
CATH (17)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.71 63.0 6.09e-01 96.4% 91.2%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.64 38.0 4.62e-01 71.1% 96.0%
2i8dA01 3.90.1150.200 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.64 27.0 2.80e-01 90.4% 38.3%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 39.0 4.22e-01 72.3% 79.7%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.60 38.0 3.63e-01 72.3% 52.9%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 40.0 4.27e-01 81.9% 85.3%
3nqhA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.57 44.0 3.08e-01 86.7% 92.7%
7wu7501 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.56 49.0 4.24e-01 95.2% 76.2%
2ct4A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 40.0 4.25e-01 73.5% 92.9%
1ewqA04 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.53 45.0 3.76e-01 90.4% 70.6%
3zpmA00 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.53 41.0 3.10e-01 85.5% 46.0%
3hr8A02 3.30.250.10 Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain 0.52 38.0 3.98e-01 80.7% 84.0%
1eigA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 38.0 4.02e-01 80.7% 98.6%
5yk4A04 1.10.1420.10 Mainly Alpha › Orthogonal Bundle › MutS, DNA mismatch repair protein; Chain A, domain 3 › 0.51 43.0 3.63e-01 91.6% 71.3%
2mp1A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.51 37.0 3.83e-01 78.3% 88.3%
1q7fB00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.50 40.0 2.90e-01 91.6% 60.6%
3pnnA00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.50 38.0 2.63e-01 81.9% 54.5%
ECOD (32)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4977469 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.64 41.0 4.42e-01 74.7% 77.1%
4938120 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.63 41.0 4.43e-01 74.7% 78.6%
5025916 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 48.0 4.04e-01 83.1% 95.9%
4968248 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.63 40.0 4.32e-01 74.7% 77.1%
4116921 4.1.1.297 ↗ beta barrels › SH3 › SH3 › SH3 › YajC 0.62 35.0 4.02e-01 71.1% 76.7%
3609597 4.1.1.236 ↗ beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 0.62 39.0 4.40e-01 72.3% 88.3%
4147290 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.61 40.0 4.34e-01 75.9% 84.6%
3947085 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.61 40.0 4.36e-01 74.7% 81.4%
5028692 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.61 38.0 4.23e-01 72.3% 81.5%
5040230 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.60 38.0 4.21e-01 72.3% 81.5%
4952854 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.60 39.0 4.28e-01 72.3% 83.1%
4930861 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.60 39.0 4.26e-01 72.3% 84.6%
3415237 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 49.0 3.78e-01 96.4% 97.7%
5030430 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 38.0 4.20e-01 73.5% 83.1%
5043091 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.59 39.0 4.18e-01 77.1% 80.9%
5016556 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.59 41.0 4.08e-01 73.5% 84.4%
4964421 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.59 38.0 4.16e-01 72.3% 83.1%
4540843 4.1.1.434 ↗ beta barrels › SH3 › SH3 › SH3 › DUF2642 0.58 38.0 4.19e-01 77.1% 86.2%
4368811 4.1.1.364 ↗ beta barrels › SH3 › SH3 › SH3 › GatD_N 0.58 36.0 4.11e-01 71.1% 92.7%
3834747 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.58 37.0 3.98e-01 74.7% 77.1%
4056487 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.58 38.0 4.13e-01 77.1% 81.4%
4932588 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.57 38.0 4.15e-01 75.9% 86.2%
5035934 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.57 37.0 4.04e-01 71.1% 83.1%
3989898 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.57 37.0 4.05e-01 72.3% 83.1%
4012803 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.57 40.0 2.73e-01 73.5% 22.6%
4403216 4.1.1.237 ↗ beta barrels › SH3 › SH3 › SH3 › KOW4_SPT5 0.57 40.0 4.26e-01 73.5% 92.9%
3708055 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.56 37.0 4.10e-01 72.3% 86.2%
3601162 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 37.0 4.09e-01 72.3% 86.2%
4083915 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.55 40.0 4.15e-01 75.9% 85.3%
4176722 719.2.1.1 ↗ beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.53 38.0 3.68e-01 79.5% 96.0%
3238632 389.1.2.0 ↗ few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.52 37.0 3.67e-01 77.1% 91.1%
5055783 101.1.2.70 ↗ alpha arrays › HTH › HTH › winged helix domain › PqqD 0.50 37.0 3.65e-01 78.3% 93.3%