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MT074134.1__QIG63176.1__ARB14_32__00032

Bact-Vir

MT074134.1__QIG63176.1__ARB14_32__00032

Identity

Accession:
MT074134 ↗
Kingdom:
phage

Quality

79.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-93
PDB
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1pzdA01 2.60.40.1480 Mainly Beta › Sandwich › Immunoglobulin-like › Coatomer, gamma subunit, appendage domain 0.65 50.0 4.09e-01 80.0% 75.0%
2hezA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.64 46.0 3.09e-01 74.4% 100.0%
3kf3A02 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.63 49.0 3.92e-01 83.3% 73.4%
3uuwB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.63 43.0 3.35e-01 70.0% 81.0%
2qc5A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.63 50.0 3.41e-01 84.4% 94.0%
6o15A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.62 44.0 3.26e-01 73.3% 73.0%
1imuA00 3.30.160.100 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Ribosome hibernation promotion factor-like 0.61 54.0 5.15e-01 100.0% 84.1%
4akmB00 2.40.160.110 Mainly Beta › Beta Barrel › Porin › 0.60 49.0 4.08e-01 87.8% 74.5%
1rwiA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.60 48.0 3.49e-01 86.7% 92.6%
2ogqA01 3.30.1120.30 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain 0.60 48.0 4.26e-01 84.4% 85.7%
8djfA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.60 44.0 3.13e-01 77.8% 97.5%
4n9jA02 3.30.1120.130 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.60 41.0 3.90e-01 82.2% 58.9%
4m00A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.59 43.0 3.16e-01 75.6% 90.3%
3ecqA01 2.60.120.870 Mainly Beta › Sandwich › Jelly Rolls › 0.59 40.0 3.19e-01 70.0% 66.1%
2p4oA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.59 47.0 3.32e-01 87.8% 92.5%
1gbgA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 46.0 3.50e-01 90.0% 58.4%
2z0lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.56 38.0 2.67e-01 70.0% 39.9%
1k90A02 3.90.1760.10 Alpha Beta › Alpha-Beta Complex › Adenylylcyclase toxin fold › Anthrax toxin, edema factor, central domain 0.56 40.0 3.38e-01 76.7% 53.5%
4azzA00 2.60.120.560 Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 0.56 42.0 3.55e-01 83.3% 70.3%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.56 38.0 3.45e-01 82.2% 52.5%
4cciA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 42.0 3.01e-01 80.0% 87.8%
5hkeA01 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.55 46.0 3.18e-01 91.1% 55.0%
3buuB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.55 44.0 3.41e-01 90.0% 87.7%
4chmB00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 42.0 3.79e-01 82.2% 75.0%
2bjfA01 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.54 43.0 2.99e-01 86.7% 53.1%
1cruA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.54 44.0 2.85e-01 91.1% 44.2%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 41.0 3.70e-01 82.2% 68.5%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.53 37.0 3.94e-01 72.2% 83.7%
2gcjA01 2.30.29.150 Mainly Beta › Roll › PH-domain like › 0.53 39.0 3.42e-01 77.8% 55.2%
1lc0A02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.52 39.0 3.43e-01 81.1% 100.0%
2cwsA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 44.0 3.35e-01 94.4% 42.7%
8b55A01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 44.0 3.52e-01 92.2% 64.2%
2r1bA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 42.0 3.27e-01 87.8% 56.1%
1tltA02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.52 40.0 3.26e-01 85.6% 100.0%
1lbvA01 3.30.540.10 Alpha Beta › 2-Layer Sandwich › Fructose-1,6-Bisphosphatase; Chain A, domain 1 › Fructose-1,6-Bisphosphatase, subunit A, domain 1 0.52 42.0 3.73e-01 91.1% 63.8%
1oq1B00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 40.0 3.13e-01 86.7% 67.6%
2b5uA03 3.10.380.10 Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Colicin E3-like ribonuclease domain 0.51 40.0 3.94e-01 86.7% 78.6%
2ntkB00 3.60.20.20 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Inosine monophosphate cyclohydrolase-like 0.51 40.0 3.25e-01 88.9% 84.2%
3asiA01 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 43.0 3.43e-01 91.1% 62.9%
6v55A02 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.51 42.0 3.27e-01 88.9% 61.0%
2f9zC00 3.30.1330.200 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › 0.51 36.0 3.07e-01 74.4% 97.4%
2pvaA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.51 44.0 3.07e-01 100.0% 90.3%
3v0aB03 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.50 41.0 3.19e-01 90.0% 56.1%
4mveA00 2.40.128.580 Mainly Beta › Beta Barrel › Lipocalin › GXWXG domain 0.50 41.0 3.59e-01 93.3% 72.1%
ECOD (62)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5045407 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.73 65.0 5.79e-01 100.0% 97.7%
4940485 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.69 47.0 4.18e-01 70.0% 73.6%
4945655 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.66 46.0 4.45e-01 71.1% 70.0%
4997629 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.66 45.0 3.50e-01 70.0% 85.4%
3338126 5.1.3.67 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.65 47.0 3.37e-01 75.6% 54.9%
4934604 2003.1.1.22 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA 0.65 45.0 3.07e-01 72.2% 52.1%
5078256 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.65 45.0 3.48e-01 72.2% 84.6%
5051984 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.64 46.0 4.20e-01 75.6% 73.3%
3597540 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.63 52.0 3.45e-01 88.9% 28.6%
3475247 4184.1.1.1 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › DM9 0.63 36.0 3.97e-01 77.8% 71.4%
1851179 4184.1.1.1 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › DM9 0.62 35.0 3.95e-01 76.7% 71.4%
4059006 9.9.1.0 beta barrels › Lipocalins/Streptavidin › Hypothetical protein YwiB › Hypothetical protein YwiB 0.62 45.0 4.08e-01 76.7% 91.2%
3478153 4184.1.1.1 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › DM9 0.62 36.0 4.01e-01 77.8% 72.9%
3739678 5.1.4.74 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Vps16_N 0.62 44.0 2.90e-01 75.6% 39.0%
3705756 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.62 45.0 3.73e-01 75.6% 72.0%
3496211 4184.1.1.0 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.62 35.0 3.92e-01 77.8% 71.4%
3788776 5.1.4.38 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC1 0.62 47.0 3.23e-01 82.2% 60.3%
3483268 4184.1.1.0 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.61 35.0 3.81e-01 77.8% 66.7%
3976843 9.11.1.1 beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like › MliC 0.61 44.0 4.43e-01 74.4% 80.9%
3248668 79.1.1.0 beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain 0.61 42.0 4.48e-01 71.1% 82.5%
4133516 10.1.1.26 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Glyco_hydro_32C 0.61 48.0 4.18e-01 90.0% 57.8%
3709735 109.4.1.2084 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF7051 0.60 48.0 3.39e-01 85.6% 69.2%
5003963 5.1.11.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › eIF2A 0.59 44.0 2.86e-01 78.9% 30.1%
3213121 4184.1.1.0 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.59 38.0 4.13e-01 78.9% 78.7%
3472296 4184.1.1.1 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › DM9 0.59 34.0 3.65e-01 76.7% 66.7%
3244743 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.59 37.0 3.09e-01 78.9% 38.0%
3597007 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.58 43.0 3.45e-01 76.7% 65.9%
4024012 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 44.0 3.40e-01 80.0% 43.4%
3923314 2007.2.3.1 a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase 0.58 42.0 3.04e-01 75.6% 35.9%
3210220 4205.1.1.0 a+b two layers › SMI1/KNR4-like › SMI1/KNR4-like › SMI1/KNR4-like 0.58 47.0 3.95e-01 88.9% 98.1%
4955729 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.58 42.0 3.49e-01 78.9% 61.8%
3231485 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.57 47.0 3.86e-01 87.8% 65.0%
3405941 4184.1.1.1 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › DM9 0.57 36.0 4.05e-01 74.4% 83.8%
3176855 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.57 44.0 2.80e-01 82.2% 38.2%
3470631 292.2.1.3 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain › Plk4_PB2 0.57 42.0 3.65e-01 75.6% 61.5%
3926623 4184.1.1.0 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat 0.57 37.0 4.09e-01 75.6% 82.2%
3217546 11.10.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like 0.56 47.0 4.34e-01 90.0% 93.0%
3412604 5.1.4.224 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40_RFWD3 0.56 48.0 3.23e-01 95.6% 92.2%
3511439 220.1.1.193 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_UBFD1_C 0.56 42.0 3.92e-01 80.0% 68.1%
3968293 71.2.1.3 beta meanders › Lipoprotein localization factors LolAB › PA1994-like › PA1994-like › DUF3108 0.55 44.0 3.38e-01 86.7% 64.8%
4934826 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 43.0 3.01e-01 84.4% 90.8%
3247178 4184.1.1.2 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.55 36.0 3.84e-01 77.8% 75.0%
3236058 4184.1.1.2 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.55 37.0 3.83e-01 76.7% 72.9%
None 0.55 40.0 3.20e-01 76.7% 60.5%
3791485 6129.1.1.1 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › VWD 0.55 41.0 2.94e-01 77.8% 44.3%
5037595 2004.1.1.308 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.55 47.0 3.03e-01 92.2% 36.7%
3212409 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.54 40.0 3.42e-01 77.8% 77.9%
5049183 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.54 42.0 3.84e-01 83.3% 72.0%
3789912 4184.1.1.2 beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b 0.54 36.0 3.74e-01 74.4% 72.9%
3198094 295.1.1.1 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PC4 0.54 37.0 3.96e-01 72.2% 83.7%
4026536 220.1.1.53 beta barrels › PH domain-like › PH domain-like › PH domain-like › ISP1_C 0.53 43.0 3.84e-01 85.6% 75.0%
3550365 331.23.1.2 a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › IntS9_C 0.53 37.0 3.97e-01 73.3% 88.5%
4003966 5.1.1.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed 0.52 39.0 3.29e-01 82.2% 75.3%
3495596 10.1.1.17 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 0.52 45.0 3.33e-01 94.4% 43.5%
3828657 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 39.0 3.83e-01 81.1% 93.0%
3507416 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.52 43.0 3.42e-01 91.1% 63.7%
3292855 220.1.1.36 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.52 41.0 3.67e-01 84.4% 72.8%
1839958 12.1.1.23 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › hGDE_central 0.51 37.0 3.33e-01 74.4% 88.3%
3260465 219.1.1.6 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Acetyltransf_2 0.51 40.0 2.89e-01 90.0% 60.0%
3913267 10.1.1.5 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Pentaxin 0.51 42.0 3.28e-01 91.1% 58.5%
4106356 6.1.1.0 beta duplicates or obligate multimers › beta-Trefoil › beta-Trefoil › beta-Trefoil 0.51 41.0 3.67e-01 90.0% 90.8%
4298724 10.1.1.0 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.50 40.0 3.39e-01 86.7% 69.0%