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MT074140.1__QIG63957.1__DAC20_208__00204
Bact-VirMT074140.1__QIG63957.1__DAC20_208__00204
Identity
- Accession:
- MT074140 ↗
- Kingdom:
- phage
Quality
59.2
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 131-194
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qsbA00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.74 | 62.0 | 5.66e-01 | 92.2% | 92.9% |
| 1d3yA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.69 | 44.0 | 4.31e-01 | 89.1% | 59.2% |
| 2kp7A01 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.69 | 56.0 | 5.39e-01 | 89.1% | 87.8% |
| 2y44A00 | 1.20.1260.80 | Mainly Alpha › Up-down Bundle › Ferritin › | 0.69 | 52.0 | 3.68e-01 | 79.7% | 83.7% |
| 4dhiB02 | 1.20.1300.20 | Mainly Alpha › Up-down Bundle › 3 helical TM bundles of succinate and fumarate reductases › Peptidase C65 Otubain, subdomain 2 | 0.69 | 58.0 | 4.52e-01 | 96.9% | 91.7% |
| 3oxfA05 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.68 | 47.0 | 4.52e-01 | 73.4% | 66.7% |
| 3rlfF01 | 1.20.58.370 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › MalF N-terminal region-like | 0.67 | 49.0 | 4.48e-01 | 78.1% | 73.3% |
| 2felA00 | 1.20.200.10 | Mainly Alpha › Up-down Bundle › Fumarase C; Chain A, domain 2 › Fumarase/aspartase (Central domain) | 0.66 | 56.0 | 3.59e-01 | 98.4% | 91.7% |
| 7y11B01 | 1.10.8.20 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p | 0.66 | 40.0 | 4.05e-01 | 79.7% | 61.9% |
| 2yv9B02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.63 | 44.0 | 3.49e-01 | 73.4% | 62.7% |
| 3gfaA00 | 3.40.109.10 | Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase | 0.62 | 54.0 | 3.87e-01 | 100.0% | 65.3% |
| 1t6cA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.60 | 50.0 | 4.00e-01 | 90.6% | 65.6% |
| 2xvtC00 | 1.10.150.510 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Receptor activity modifying family | 0.56 | 45.0 | 4.24e-01 | 100.0% | 70.9% |
| 6d6wA01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.55 | 45.0 | 2.91e-01 | 90.6% | 42.5% |
| 2hoqA02 | 1.10.150.520 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.55 | 42.0 | 3.92e-01 | 82.8% | 88.6% |
| 4gxbA02 | 1.20.80.60 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.54 | 44.0 | 4.50e-01 | 95.3% | 98.4% |
| 2pjqA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.53 | 44.0 | 3.97e-01 | 93.8% | 85.4% |
| 1w98B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.51 | 40.0 | 3.43e-01 | 90.6% | 75.4% |
| 16vpA00 | 1.10.1290.10 | Mainly Alpha › Orthogonal Bundle › Conserved core of transcriptional regulatory protein vp16 › Alpha trans-inducing (Alpha-TIF) | 0.50 | 46.0 | 2.90e-01 | 100.0% | 52.4% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4944453 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.73 | 50.0 | 4.46e-01 | 71.9% | 65.6% |
| 3720055 | 5046.1.1.0 ↗ | extended segments › F-type ATP synthase subunit b › F-type ATP synthase subunit b › F-type ATP synthase subunit b | 0.69 | 45.0 | 3.47e-01 | 90.6% | 31.9% |
| 4976690 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.67 | 38.0 | 4.23e-01 | 81.2% | 72.0% |
| 5059134 | 632.22.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats | 0.66 | 54.0 | 5.53e-01 | 87.5% | 100.0% |
| 3828011 | 109.4.1.1271 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, TPR_24 | 0.66 | 46.0 | 3.29e-01 | 73.4% | 43.2% |
| 5030594 | 2006.1.4.2 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN | 0.54 | 49.0 | 3.76e-01 | 98.4% | 93.6% |
| 4103293 | 101.1.2.62 ↗ | alpha arrays › HTH › HTH › winged helix domain › Sigma54_DBD | 0.52 | 44.0 | 4.12e-01 | 95.3% | 75.0% |
| 3604147 | 873.1.1.9 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R,DUF2507 | 0.51 | 38.0 | 2.95e-01 | 79.7% | 68.6% |
D2
medium
residues 1-70