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MT074146.1__QIG64704.1__SJC03_26__00026

Bact-Vir

MT074146.1__QIG64704.1__SJC03_26__00026

Identity

Accession:
MT074146 ↗
Kingdom:
phage

Quality

82.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-47
PDB
Domain cluster: representative
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1twfI01 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.76 57.0 5.72e-01 87.0% 82.6%
3cngA01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.74 52.0 5.82e-01 73.9% 100.0%
1ybyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.74 47.0 4.27e-01 91.3% 46.9%
1hxdA03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 44.0 4.59e-01 89.1% 65.1%
2r7dA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.72 43.0 3.96e-01 73.9% 45.0%
3a5zD02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 43.0 3.87e-01 82.6% 43.8%
1wiiA01 2.20.25.190 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.68 47.0 4.32e-01 73.9% 75.8%
6cmzA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.67 53.0 3.91e-01 95.7% 33.6%
1u0lA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 42.0 3.77e-01 82.6% 43.8%
1yuaA02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.67 49.0 4.63e-01 82.6% 70.7%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 44.0 4.40e-01 89.1% 66.7%
2fgtA03 3.30.310.160 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YycH protein, domain 2 0.63 49.0 3.54e-01 87.0% 37.8%
1t9hA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 39.0 3.41e-01 76.1% 41.1%
1w9pA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.61 41.0 3.73e-01 89.1% 50.8%
6iw6B01 1.10.1410.10 Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain › 0.60 42.0 2.75e-01 82.6% 16.1%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.60 48.0 3.73e-01 97.8% 68.6%
2eifA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 38.0 3.59e-01 82.6% 49.2%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 42.0 4.04e-01 78.3% 77.4%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.58 41.0 3.88e-01 78.3% 66.1%
5dezA03 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.58 39.0 3.49e-01 89.1% 45.9%
4dwsA01 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.57 44.0 3.43e-01 95.7% 89.4%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.57 41.0 3.89e-01 78.3% 67.9%
4hdoA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 44.0 3.65e-01 93.5% 78.3%
1sxjH01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.56 45.0 3.37e-01 93.5% 82.3%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.56 39.0 3.91e-01 78.3% 78.7%
3iwaA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 47.0 3.25e-01 95.7% 31.8%
3qokA02 3.10.50.10 Alpha Beta › Roll › Chitinase A; domain 3 › 0.55 42.0 3.43e-01 89.1% 46.4%
2diqA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 42.0 3.45e-01 91.3% 52.0%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 40.0 3.76e-01 82.6% 76.3%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 38.0 3.32e-01 78.3% 58.2%
4hs5A00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.54 44.0 3.53e-01 97.8% 70.5%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 39.0 3.95e-01 82.6% 80.9%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.53 42.0 3.59e-01 91.3% 65.0%
2hc5A01 3.30.160.170 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › FlaG-like 0.53 42.0 3.36e-01 91.3% 76.5%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 37.0 3.47e-01 78.3% 83.6%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 37.0 3.31e-01 78.3% 68.0%
2wfwA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 34.0 3.23e-01 91.3% 48.3%
2nwvA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.52 37.0 2.91e-01 80.4% 42.0%
2eczA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 38.0 3.42e-01 84.8% 65.7%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 36.0 3.46e-01 80.4% 74.6%
6u5vB07 3.30.1120.100 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.51 37.0 2.88e-01 87.0% 88.4%
1xkiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.51 37.0 2.86e-01 84.8% 37.5%
6w0pA02 1.50.10.10 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › 0.50 42.0 2.46e-01 100.0% 22.0%
4jlxA02 3.30.460.90 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.50 35.0 2.45e-01 76.1% 78.6%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3982469 375.1.1.130 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_Tnp_IS1 0.81 56.0 5.94e-01 73.9% 87.5%
4963768 375.1.1.354 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF28086 0.81 57.0 6.33e-01 78.3% 100.0%
3985807 375.1.1.130 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_Tnp_IS1 0.81 56.0 5.73e-01 73.9% 80.0%
3701625 375.8.1.0 few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta 0.80 58.0 5.93e-01 80.4% 80.0%
3943642 375.1.1.130 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_Tnp_IS1 0.80 59.0 5.95e-01 78.3% 80.0%
None 0.80 58.0 3.49e-01 80.4% 11.8%
3593875 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.79 60.0 5.67e-01 87.0% 69.1%
4927636 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.78 57.0 6.00e-01 78.3% 92.5%
3623599 377.1.1.83 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › PF26040 0.78 53.0 5.83e-01 71.7% 94.3%
3976145 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.78 56.0 5.71e-01 78.3% 80.0%
3505640 375.1.1.19 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.77 59.0 5.37e-01 87.0% 63.3%
3580045 375.1.1.217 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › PF26040 0.77 55.0 6.02e-01 82.6% 100.0%
3189994 375.1.1.19 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.76 57.0 4.64e-01 87.0% 42.2%
3208203 375.1.1.19 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.76 55.0 5.25e-01 80.4% 65.5%
8012 375.1.1.19 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.76 57.0 5.61e-01 87.0% 77.6%
3702861 375.1.1.19 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.76 59.0 5.62e-01 95.7% 72.7%
5030311 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.76 55.0 5.27e-01 80.4% 69.1%
3935170 375.1.1.19 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.76 55.0 5.60e-01 80.4% 80.0%
3392762 377.1.1.83 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › PF26040 0.76 52.0 5.64e-01 71.7% 94.3%
3247046 377.1.1.83 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › PF26040 0.76 55.0 5.84e-01 78.3% 90.0%
3979360 375.1.1.130 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Zn_Tnp_IS1 0.75 58.0 5.73e-01 87.0% 80.0%
3986256 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.75 60.0 5.52e-01 89.1% 68.3%
3500033 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.75 57.0 5.57e-01 89.1% 76.0%
4066623 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.74 45.0 4.17e-01 76.1% 46.7%
3612107 375.8.1.1 few secondary structure elements › Rubredoxin-like › Zinc-binding domain of translation initiation factor 2 beta › Zinc-binding domain of translation initiation factor 2 beta › eIF-5_eIF-2B 0.74 56.0 5.12e-01 89.1% 63.3%
4963287 375.1.1.334 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › HVO_0758 0.73 57.0 5.38e-01 91.3% 70.9%
4028185 375.1.1.19 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.73 56.0 5.47e-01 89.1% 78.0%
4119533 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.73 45.0 4.13e-01 76.1% 46.7%
3308072 375.1.1.53 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Nudix_N_2 0.72 53.0 5.65e-01 80.4% 90.0%
3383283 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.71 46.0 4.12e-01 91.3% 47.7%
3967552 375.1.1.71 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF2387 0.70 51.0 5.23e-01 80.4% 82.2%
5077640 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.70 52.0 4.92e-01 80.4% 78.2%
3617175 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 48.0 4.60e-01 78.3% 61.8%
4000403 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.69 48.0 4.72e-01 78.3% 68.0%
4358761 2.1.1.10 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › EFP 0.68 45.0 4.00e-01 91.3% 47.7%
4202852 375.1.1.26 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.68 57.0 4.53e-01 100.0% 87.6%
3929758 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 48.0 4.62e-01 78.3% 70.9%
3165551 375.1.1.38 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Topo_Zn_Ribbon 0.67 49.0 4.61e-01 80.4% 70.7%
4256317 375.1.1.38 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Topo_Zn_Ribbon 0.67 50.0 4.79e-01 82.6% 74.5%
3646226 375.1.1.31 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 0.66 49.0 4.13e-01 80.4% 48.8%
5078768 101.1.2.819 alpha arrays › HTH › HTH › winged helix domain › PF27231 0.66 56.0 3.94e-01 100.0% 96.9%
4937515 375.1.1.26 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.66 55.0 4.55e-01 100.0% 97.8%
3620138 3246.1.1.4 few secondary structure elements › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › Disulfide-rich domain in A Disintegrin And Metalloprotease (ADAM) domain-containing proteins › ADAMTS_CR_3 0.65 48.0 3.78e-01 80.4% 45.0%
4024148 64.1.1.0 beta meanders › WW domain-like › WW domain › WW domain 0.65 44.0 4.86e-01 82.6% 94.3%
3580264 366.1.1.8 few secondary structure elements › Blood coagulation inhibitor (disintegrin) › Blood coagulation inhibitor (disintegrin) › Blood coagulation inhibitor (disintegrin) › ADAMTS_CR_3 0.64 47.0 3.71e-01 80.4% 42.0%
4960287 375.1.1.9 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom 0.64 48.0 3.88e-01 80.4% 44.4%
4951495 375.1.1.299 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf 0.64 46.0 4.78e-01 78.3% 90.0%
4067858 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 40.0 3.54e-01 82.6% 41.4%
4428974 375.1.1.9 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-C4_Topoisom 0.63 49.0 5.01e-01 80.4% 86.7%
3568037 375.1.1.89 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LITAF-like 0.63 44.0 4.59e-01 78.3% 92.5%
3898522 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.62 50.0 4.90e-01 89.1% 86.0%
3882464 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.62 50.0 4.26e-01 89.1% 57.3%
3356611 64.1.1.0 beta meanders › WW domain-like › WW domain › WW domain 0.62 45.0 4.26e-01 91.3% 65.5%
4269256 4.1.1.245 beta barrels › SH3 › SH3 › SH3 › SspH 0.59 40.0 3.71e-01 78.3% 53.3%
3581143 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.58 42.0 3.81e-01 78.3% 56.9%
4116754 4.1.1.175 beta barrels › SH3 › SH3 › SH3 › MSSS 0.58 39.0 4.01e-01 78.3% 75.6%
3231263 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.57 41.0 4.08e-01 76.1% 74.0%
3256498 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 40.0 3.87e-01 78.3% 67.3%
3268906 5.1.10.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed 0.56 45.0 3.77e-01 95.7% 91.0%
3395948 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.56 40.0 3.87e-01 78.3% 69.1%
3816553 4.1.1.306 beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N 0.56 40.0 3.86e-01 78.3% 69.1%
3475965 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 39.0 3.97e-01 78.3% 80.0%
4882410 568.1.1.25 few secondary structure elements › p8-MTCP1-related › p8-MTCP1-related › p8-MTCP1-related › NDUFA12 0.54 42.0 3.35e-01 93.5% 68.2%
3774108 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.54 43.0 3.50e-01 93.5% 51.6%
3494671 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 34.0 3.49e-01 82.6% 64.4%
3701084 316.1.1.14 a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › LicD 0.53 40.0 2.79e-01 87.0% 23.3%
3407820 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.52 41.0 3.51e-01 93.5% 62.4%
3784907 896.1.1.3 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › SRP9-21 0.52 36.0 3.08e-01 76.1% 44.7%
3817530 5.1.3.65 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.51 38.0 2.49e-01 89.1% 16.9%
3401645 1.1.1.27 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp, TAXi_N 0.50 35.0 2.18e-01 80.4% 18.3%
3898370 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.50 36.0 3.44e-01 80.4% 79.3%