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MT074146.1__QIG64717.1__SJC03_39__00039

Bact-Vir

MT074146.1__QIG64717.1__SJC03_39__00039

Identity

Accession:
MT074146 ↗
Kingdom:
phage

Quality

86.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Bacteroides_phage_SJC03

TaxID: 2710505

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-55
PDB
Domain cluster: representative
CATH (23)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ij5A00 3.40.50.1240 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphoglycerate mutase-like 0.74 45.0 2.99e-01 80.0% 15.6%
1dqeA00 1.10.238.20 Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain 0.69 46.0 3.42e-01 74.5% 27.7%
3j7aY00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 48.0 3.51e-01 81.8% 62.3%
4jgwA02 1.10.840.10 Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain 0.63 45.0 2.96e-01 76.4% 77.5%
7k36H01 1.20.140.30 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › MOB kinase activator 0.63 49.0 3.64e-01 90.9% 84.1%
1xjuA00 1.10.530.40 Mainly Alpha › Orthogonal Bundle › Lysozyme › 0.63 50.0 3.71e-01 90.9% 98.1%
1xl7A02 3.30.559.70 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Choline/Carnitine o-acyltransferase, domain 2 0.62 47.0 2.95e-01 83.6% 83.1%
2ijeS00 1.10.840.10 Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain 0.62 47.0 3.10e-01 83.6% 24.9%
2og9A01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.61 48.0 3.68e-01 87.3% 62.3%
4l9mA02 1.10.840.10 Mainly Alpha › Orthogonal Bundle › Son of Sevenless (SoS) protein; Chain S, domain 2 › Ras guanine-nucleotide exchange factors catalytic domain 0.60 46.0 2.99e-01 83.6% 22.9%
1a87A02 1.10.490.30 Mainly Alpha › Orthogonal Bundle › Globin-like › Colicin 0.60 41.0 2.82e-01 76.4% 19.5%
1ahjB01 1.10.472.20 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Nitrile hydratase, beta subunit 0.58 45.0 3.58e-01 83.6% 48.2%
3h4cA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.58 44.0 3.69e-01 83.6% 97.9%
1rypK00 3.60.20.10 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain 0.58 44.0 3.02e-01 81.8% 27.8%
6aikB00 3.40.50.10300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like 0.57 43.0 2.77e-01 85.5% 22.1%
1ursA02 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.56 43.0 3.14e-01 89.1% 84.4%
2qkbA00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.56 41.0 3.10e-01 81.8% 81.6%
2d05A02 1.20.141.10 Mainly Alpha › Up-down Bundle › Chitosanase, subunit A; domain 1 › Chitosanase, subunit A, domain 1 0.56 46.0 3.74e-01 96.4% 80.2%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.55 41.0 3.43e-01 83.6% 49.5%
2lpeA01 6.10.140.1120 Special › Helix non-globular › Helix Hairpins › 0.55 38.0 3.52e-01 76.4% 69.2%
2fulB00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.55 40.0 3.04e-01 85.5% 32.1%
4bqnB01 3.40.50.12080 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 41.0 2.94e-01 83.6% 26.2%
1dxhA01 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.54 40.0 2.88e-01 85.5% 55.2%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4442769 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.68 48.0 3.48e-01 74.5% 57.3%
3507067 197.1.1.1 ↗ alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › FERM_M 0.67 51.0 4.15e-01 85.5% 66.4%
4303083 109.4.1.114 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Xpo1,Exportin-T 0.66 51.0 2.99e-01 89.1% 24.4%
5013972 186.1.1.0 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N 0.64 50.0 4.06e-01 85.5% 71.4%
3244835 197.1.1.0 ↗ alpha bundles › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like › Acyl-CoA binding protein-like 0.64 49.0 3.75e-01 85.5% 54.1%
5019560 2002.1.1.120 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Radical_SAM 0.60 48.0 3.04e-01 89.1% 23.3%
4029967 633.1.1.0 ↗ alpha bundles › Bromodomain-like › Bromodomain › Bromodomain 0.60 46.0 3.64e-01 83.6% 73.9%
3787521 101.1.10.1 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.60 46.0 3.32e-01 85.5% 37.6%
5002420 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.59 47.0 4.58e-01 87.3% 90.0%
142120 106.1.1.5 ↗ alpha arrays › Globin-like › Globin-like › Globin-like › HisK_N 0.58 44.0 3.34e-01 87.3% 67.3%
4502969 2004.1.1.59 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CoaE 0.57 42.0 2.86e-01 80.0% 38.0%
3703846 604.3.1.0 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.56 43.0 4.05e-01 83.6% 94.1%