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MT074146.1__QIG64888.1__SJC03_214__00210
Bact-VirMT074146.1__QIG64888.1__SJC03_214__00210
Identity
- Accession:
- MT074146 ↗
- Kingdom:
- phage
Quality
84.8
mean pLDDT
Cluster
View cluster (49 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 30-102_249-403
Domain cluster:
rep: IMGVR_UViG_648028040_000001-648028040-648194435__D26-229
CATH (32)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dz3A00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.74 | 38.0 | 5.10e-01 | 84.2% | 91.1% |
| 4ru1A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.72 | 45.0 | 5.57e-01 | 95.2% | 99.3% |
| 1jx6A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.71 | 45.0 | 4.97e-01 | 94.7% | 78.0% |
| 7kx9A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.68 | 38.0 | 4.65e-01 | 80.7% | 84.7% |
| 4p1zA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.66 | 36.0 | 4.73e-01 | 79.4% | 94.5% |
| 5c5dD00 | 3.40.50.1970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.63 | 42.0 | 4.99e-01 | 97.8% | 95.6% |
| 3h5lA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.63 | 39.0 | 4.51e-01 | 99.1% | 84.8% |
| 3knzA02 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.62 | 35.0 | 4.20e-01 | 79.4% | 82.9% |
| 3qy9B01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 37.0 | 4.66e-01 | 98.2% | 100.0% |
| 4q9aA00 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.61 | 49.0 | 5.01e-01 | 83.3% | 97.7% |
| 4xfkA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.61 | 39.0 | 4.37e-01 | 97.4% | 81.8% |
| 2nvwB01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 47.0 | 5.00e-01 | 100.0% | 91.3% |
| 1piiA02 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.60 | 39.0 | 4.23e-01 | 98.2% | 75.9% |
| 4pg4A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.60 | 41.0 | 4.80e-01 | 91.2% | 98.1% |
| 1d5cA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 41.0 | 4.83e-01 | 78.9% | 100.0% |
| 1vqtA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 37.0 | 4.06e-01 | 98.2% | 74.9% |
| 7otsB01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 42.0 | 3.88e-01 | 73.7% | 99.6% |
| 2oztA02 | 3.20.20.120 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Enolase-like C-terminal domain | 0.57 | 40.0 | 4.19e-01 | 97.8% | 78.3% |
| 3i1iB01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.57 | 44.0 | 3.73e-01 | 80.3% | 90.3% |
| 1v5eA02 | 3.40.50.1220 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain | 0.56 | 33.0 | 3.81e-01 | 78.1% | 78.2% |
| 2p6pA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.56 | 36.0 | 4.14e-01 | 80.7% | 87.2% |
| 4bmvI00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 47.0 | 4.58e-01 | 91.7% | 93.7% |
| 3rm5B01 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.54 | 44.0 | 4.07e-01 | 86.0% | 80.0% |
| 4fidA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 41.0 | 4.46e-01 | 79.4% | 100.0% |
| 1wp9A02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.54 | 31.0 | 3.65e-01 | 90.8% | 81.9% |
| 1aipA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 40.0 | 4.48e-01 | 80.7% | 99.4% |
| 3lovA01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.53 | 35.0 | 4.16e-01 | 79.4% | 98.7% |
| 6yttA02 | 3.40.50.2030 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 36.0 | 4.10e-01 | 80.3% | 93.5% |
| 3l3bA00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.52 | 39.0 | 4.09e-01 | 78.1% | 100.0% |
| 1m3sB00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.51 | 32.0 | 3.55e-01 | 79.8% | 74.9% |
| 1mjgM02 | 3.40.50.2030 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.51 | 36.0 | 3.96e-01 | 71.1% | 100.0% |
| 3pvzB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 47.0 | 4.28e-01 | 99.6% | 75.0% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2391375 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.84 | 73.0 | 7.38e-01 | 100.0% | 89.5% |
| 4988098 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.82 | 74.0 | 7.35e-01 | 100.0% | 90.2% |
| 5004680 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.80 | 77.0 | 7.16e-01 | 100.0% | 91.3% |
| 3978226 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.79 | 76.0 | 7.02e-01 | 100.0% | 91.4% |
| 1518917 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.79 | 75.0 | 6.95e-01 | 98.7% | 89.4% |
| 2468538 | 2499.2.1.0 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 | 0.78 | 74.0 | 7.11e-01 | 99.1% | 96.1% |
| 3944167 | 2499.2.1.2 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1,Gp18_domIII_N | 0.78 | 75.0 | 7.04e-01 | 100.0% | 91.5% |
| 4995822 | 2499.2.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › Phage_sheath_1 | 0.78 | 75.0 | 7.22e-01 | 100.0% | 95.3% |
| 3945699 | 2499.2.1.6 ↗ | a/b three-layered sandwiches › Subtilisin-like › Domain III of tail sheath protein Gp18 › Domain III of tail sheath protein Gp18 › DUF3383 | 0.77 | 73.0 | 7.30e-01 | 98.7% | 97.0% |
| 3967999 | 2007.1.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Response_reg | 0.70 | 39.0 | 4.91e-01 | 79.8% | 87.9% |
| 3680930 | 7579.1.1.42 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 | 0.60 | 43.0 | 3.71e-01 | 73.7% | 91.4% |
| 3977442 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.59 | 38.0 | 4.55e-01 | 87.3% | 94.2% |
| 5038975 | 2007.1.9.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) › AIRC | 0.58 | 43.0 | 4.60e-01 | 95.6% | 86.0% |
| 3379064 | 2002.1.1.97 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TMP-TENI | 0.58 | 39.0 | 3.93e-01 | 98.7% | 65.7% |
| 4011729 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.58 | 38.0 | 4.56e-01 | 98.7% | 98.1% |
| 4943540 | 2006.1.4.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like | 0.57 | 34.0 | 4.32e-01 | 73.7% | 97.1% |
| 3402339 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.56 | 40.0 | 4.36e-01 | 98.7% | 87.6% |
| 4946141 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.56 | 40.0 | 4.12e-01 | 71.5% | 100.0% |
| 3512874 | 2004.1.1.14 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU | 0.55 | 42.0 | 4.20e-01 | 78.9% | 99.6% |
| 3990099 | 2007.5.1.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase | 0.54 | 40.0 | 4.20e-01 | 75.0% | 96.7% |
| 2721399 | 7592.1.1.8 ↗ | a/b three-layered sandwiches › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF (CRISPR-associated Rossmann fold) domains › CARF_Card1 | 0.54 | 34.0 | 4.03e-01 | 86.4% | 90.8% |
| 4031847 | 7579.1.1.42 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Hydrolase_4 | 0.54 | 39.0 | 3.55e-01 | 72.8% | 99.3% |
| 4073916 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.53 | 34.0 | 4.08e-01 | 88.2% | 97.3% |
| 3641278 | 2006.1.1.3 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase | 0.52 | 30.0 | 3.11e-01 | 83.3% | 58.6% |
| 4591558 | 2002.1.1.30 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Glyco_hydro_18 | 0.50 | 44.0 | 4.07e-01 | 98.7% | 72.5% |
D2
high
residues 107-246
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6melB01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.55 | 42.0 | 4.08e-01 | 95.7% | 72.9% |
| 1eucB01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.55 | 42.0 | 4.08e-01 | 95.7% | 72.9% |
| 1jllB01 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.54 | 42.0 | 4.10e-01 | 96.4% | 73.5% |
| 2qnuA00 | 3.40.1730.10 | Alpha Beta › 3-Layer(aba) Sandwich › pa0076 fold › pa0076 domain | 0.53 | 39.0 | 3.41e-01 | 75.7% | 72.0% |
| 5ds1A00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 31.0 | 3.66e-01 | 92.9% | 87.0% |
| 3aabB00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.52 | 30.0 | 3.34e-01 | 93.6% | 71.7% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4014655 | 227.1.1.12 ↗ | a+b two layers › DNA clamp › DNA clamp › DNA clamp › Rad9 | 0.59 | 38.0 | 3.81e-01 | 90.7% | 62.8% |
| 4015154 | 101.1.8.10 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › DUF3435 | 0.55 | 43.0 | 3.83e-01 | 82.9% | 63.5% |
| 3784090 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 38.0 | 2.77e-01 | 71.4% | 46.8% |
| 3695067 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 38.0 | 2.70e-01 | 72.1% | 91.2% |
| 3257659 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 37.0 | 2.76e-01 | 70.0% | 44.5% |
| 4024473 | 243.3.1.20 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › AKAP28 | 0.53 | 29.0 | 3.13e-01 | 70.0% | 60.0% |
| 4017266 | 101.1.8.10 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › DUF3435 | 0.52 | 41.0 | 3.67e-01 | 82.9% | 73.3% |
| 3667413 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 26.0 | 3.48e-01 | 79.3% | 90.7% |
| 3276881 | 11.2.1.32 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DOCK_N | 0.52 | 41.0 | 3.60e-01 | 85.0% | 94.0% |
| 3652419 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.52 | 33.0 | 3.59e-01 | 78.6% | 75.8% |
| 4659014 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.51 | 29.0 | 3.14e-01 | 87.9% | 65.5% |
D3
medium
residues 1-29_459-525