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MT074146.1__QIG64926.1__SJC03_252__00248
Bact-VirMT074146.1__QIG64926.1__SJC03_252__00248
Identity
- Accession:
- MT074146 ↗
- Kingdom:
- phage
Quality
91.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 30-113
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5xs2B02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.71 | 63.0 | 5.41e-01 | 98.8% | 66.7% |
| 1ac1A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.69 | 49.0 | 3.82e-01 | 96.4% | 34.0% |
| 3ddhA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.68 | 59.0 | 6.00e-01 | 94.0% | 97.5% |
| 2px0A01 | 1.20.120.1380 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Flagellar FlhF biosynthesis protein, N domain | 0.68 | 54.0 | 5.77e-01 | 86.9% | 100.0% |
| 2ffjA01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.67 | 44.0 | 5.11e-01 | 86.9% | 100.0% |
| 2remB00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.67 | 50.0 | 3.89e-01 | 98.8% | 35.8% |
| 4akgA16 | 1.10.8.720 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Region D6 of dynein motor | 0.67 | 58.0 | 4.71e-01 | 98.8% | 65.5% |
| 5vyoD00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.66 | 49.0 | 3.82e-01 | 98.8% | 35.6% |
| 1wlmA01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.65 | 55.0 | 5.21e-01 | 97.6% | 77.7% |
| 4kh7B02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.62 | 36.0 | 3.25e-01 | 90.5% | 41.5% |
| 1c3cA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.62 | 43.0 | 4.43e-01 | 98.8% | 76.5% |
| 3dxlA02 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.61 | 51.0 | 4.23e-01 | 100.0% | 51.3% |
| 1v4aA01 | 1.10.4050.10 | Mainly Alpha › Orthogonal Bundle › Nucleotidyltransferase substrate binding subunit/domain fold › Glutamine synthase adenylyltransferase GlnE | 0.61 | 38.0 | 3.46e-01 | 82.1% | 47.7% |
| 4ioeA00 | 1.10.287.850 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain | 0.60 | 36.0 | 3.57e-01 | 100.0% | 56.3% |
| 2qupA00 | 1.20.120.490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hypothetical protein TM1646-like domain | 0.60 | 40.0 | 3.62e-01 | 70.2% | 62.2% |
| 3ajfA00 | 1.20.1440.190 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Tenuivirus movement protein | 0.58 | 45.0 | 4.39e-01 | 83.3% | 92.4% |
| 1sj8A02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.58 | 46.0 | 4.11e-01 | 86.9% | 91.0% |
| 2w02B01 | 1.10.150.640 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle | 0.58 | 42.0 | 4.42e-01 | 100.0% | 86.5% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.57 | 35.0 | 3.65e-01 | 95.2% | 66.2% |
| 1on2A02 | 1.10.60.10 | Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Iron dependent repressor, metal binding and dimerisation domain | 0.57 | 33.0 | 3.64e-01 | 95.2% | 73.0% |
| 2qe7G01 | 1.10.287.80 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ATP synthase, gamma subunit, helix hairpin domain | 0.57 | 34.0 | 3.21e-01 | 85.7% | 51.5% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.55 | 47.0 | 4.74e-01 | 98.8% | 97.7% |
| 4mn0A00 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.55 | 45.0 | 3.61e-01 | 92.9% | 65.2% |
| 3sqiA01 | 1.10.150.540 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.55 | 43.0 | 4.11e-01 | 85.7% | 76.8% |
| 4i0xG00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.54 | 35.0 | 3.84e-01 | 94.0% | 80.9% |
| 8amqA02 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.54 | 45.0 | 3.03e-01 | 97.6% | 64.5% |
| 2oznB01 | 1.20.1270.90 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like | 0.53 | 37.0 | 3.77e-01 | 100.0% | 75.0% |
| 2p5tA00 | 1.10.8.130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.53 | 35.0 | 3.43e-01 | 100.0% | 62.0% |
| 2xkrA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.52 | 43.0 | 2.92e-01 | 97.6% | 70.9% |
| 5dvwA00 | 1.20.120.1160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.52 | 46.0 | 3.99e-01 | 98.8% | 81.1% |
| 1cmjA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.52 | 44.0 | 2.90e-01 | 97.6% | 54.4% |
| 1yozA00 | 1.10.3200.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af0941 › AF0941-like | 0.52 | 40.0 | 3.65e-01 | 90.5% | 61.9% |
| 3llkA02 | 1.20.120.310 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ERV/ALR sulfhydryl oxidase domain | 0.51 | 45.0 | 3.83e-01 | 100.0% | 75.5% |
| 4fb2A00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.51 | 43.0 | 2.88e-01 | 98.8% | 70.7% |
| 2gsvA00 | 6.10.140.40 | Special › Helix non-globular › Helix Hairpins › | 0.51 | 36.0 | 3.86e-01 | 77.4% | 94.0% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5042711 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.77 | 65.0 | 5.37e-01 | 98.8% | 52.4% |
| 3255346 | 101.1.10.1 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N | 0.77 | 69.0 | 5.85e-01 | 98.8% | 62.3% |
| 4028884 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.73 | 63.0 | 5.61e-01 | 94.0% | 67.8% |
| 4999090 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.73 | 61.0 | 5.27e-01 | 96.4% | 59.2% |
| 4987113 | 103.2.1.0 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone | 0.72 | 58.0 | 6.04e-01 | 96.4% | 97.3% |
| 4954173 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.71 | 55.0 | 5.80e-01 | 94.0% | 94.7% |
| 4948813 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.69 | 54.0 | 5.52e-01 | 95.2% | 88.7% |
| 4485359 | 103.2.1.0 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone | 0.68 | 56.0 | 5.45e-01 | 100.0% | 80.0% |
| 4948420 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.68 | 55.0 | 5.63e-01 | 100.0% | 93.8% |
| 4994194 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.68 | 53.0 | 5.53e-01 | 92.9% | 93.3% |
| 4942297 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.68 | 50.0 | 5.35e-01 | 88.1% | 94.3% |
| 4987957 | 103.2.1.0 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone | 0.67 | 55.0 | 5.72e-01 | 95.2% | 100.0% |
| 4961006 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.67 | 52.0 | 5.47e-01 | 94.0% | 94.7% |
| 4952141 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.66 | 52.0 | 5.36e-01 | 96.4% | 91.3% |
| 4991188 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.66 | 55.0 | 3.68e-01 | 97.6% | 23.3% |
| 4979817 | 103.2.1.0 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone | 0.66 | 50.0 | 5.15e-01 | 96.4% | 88.7% |
| 3621809 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.66 | 43.0 | 4.63e-01 | 72.6% | 80.0% |
| 4999401 | 4995.1.1.0 ↗ | alpha arrays › Methionine synthase domain-like › Methionine synthase domain-like › Methionine synthase domain-like | 0.65 | 58.0 | 5.78e-01 | 98.8% | 100.0% |
| 5084060 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.65 | 34.0 | 2.74e-01 | 90.5% | 26.5% |
| 4955004 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.65 | 45.0 | 5.11e-01 | 84.5% | 100.0% |
| 5057187 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.65 | 57.0 | 3.76e-01 | 100.0% | 22.4% |
| 4953264 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.64 | 57.0 | 5.71e-01 | 100.0% | 98.8% |
| 3594048 | 103.2.1.0 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone | 0.62 | 53.0 | 5.28e-01 | 100.0% | 96.7% |
| 5054405 | 606.1.1.1 ↗ | alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop | 0.62 | 46.0 | 4.38e-01 | 86.9% | 67.0% |
| 3607359 | 103.2.1.1 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › Ribonuc_red_lgN | 0.61 | 48.0 | 3.73e-01 | 95.2% | 36.1% |
| 3978377 | 235.1.1.0 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like | 0.60 | 49.0 | 3.84e-01 | 96.4% | 39.5% |
| 2791177 | 103.2.1.2 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › ATP-cone | 0.60 | 51.0 | 4.81e-01 | 97.6% | 89.6% |
| 4321901 | 235.1.1.9 ↗ | a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT | 0.59 | 50.0 | 3.98e-01 | 96.4% | 43.8% |
| 3260173 | 5102.1.1.1 ↗ | alpha arrays › C-terminal helical domain in Atu1540-like proteins › C-terminal helical domain in Atu1540-like proteins › C-terminal helical domain in Atu1540-like proteins › ParBc_2 | 0.58 | 41.0 | 3.83e-01 | 75.0% | 66.1% |
| 3249080 | 2498.5.1.0 ↗ | mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like | 0.56 | 46.0 | 4.19e-01 | 88.1% | 80.0% |
| 5052181 | 131.1.1.3 ↗ | alpha complex topology › PDEase-like › HD-domain/PDEase-like › HD-domain/PDEase-like › HD | 0.56 | 48.0 | 3.66e-01 | 97.6% | 70.2% |
| 3982835 | 2007.1.3.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Oxidored_q6 | 0.55 | 42.0 | 3.11e-01 | 83.3% | 96.4% |
| 3839004 | 138.1.1.0 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain | 0.54 | 40.0 | 3.98e-01 | 81.0% | 85.6% |
| 3618000 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.54 | 45.0 | 4.56e-01 | 100.0% | 90.6% |
| 3415357 | 2498.5.1.0 ↗ | mixed a+b and a/b › Zincin-like › GroEL-intermediate domain like › GroEL-intermediate domain like | 0.53 | 47.0 | 3.37e-01 | 97.6% | 42.1% |
| 3680378 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.53 | 38.0 | 3.67e-01 | 78.6% | 91.0% |
| 4111221 | 3413.1.1.1 ↗ | alpha bundles › Inositol phosphate phosphatase sopB N-terminal domain › Inositol phosphate phosphatase sopB N-terminal domain › Inositol phosphate phosphatase sopB N-terminal domain › IpgD | 0.53 | 45.0 | 4.34e-01 | 100.0% | 86.0% |
| 3796599 | 7563.1.1.0 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related | 0.52 | 41.0 | 2.87e-01 | 86.9% | 31.9% |
| 3789620 | 7563.1.1.0 ↗ | a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related | 0.51 | 41.0 | 2.80e-01 | 86.9% | 28.9% |
| 3636022 | 149.1.1.1 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 › p450 | 0.51 | 44.0 | 2.86e-01 | 97.6% | 53.1% |