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MT074151.1__QIG65158.1__SJC13_31__00031
Bact-VirMT074151.1__QIG65158.1__SJC13_31__00031
Identity
- Accession:
- MT074151 ↗
- Kingdom:
- phage
Quality
85.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-52
Domain cluster:
representative
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.66 | 55.0 | 4.96e-01 | 100.0% | 72.4% |
| 4ch7A02 | 3.30.70.3460 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 54.0 | 3.78e-01 | 98.0% | 39.2% |
| 1lfwA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 55.0 | 4.44e-01 | 100.0% | 99.1% |
| 2j3wC00 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.64 | 42.0 | 3.16e-01 | 82.4% | 25.9% |
| 1xjcA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 46.0 | 3.44e-01 | 80.4% | 91.7% |
| 4q7aC02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.62 | 50.0 | 4.18e-01 | 100.0% | 100.0% |
| 4emeC02 | 2.30.250.10 | Mainly Beta › Roll › Aminopeptidase i, Domain 2 › Aminopeptidase i, Domain 2 | 0.61 | 50.0 | 3.85e-01 | 100.0% | 69.6% |
| 2z5bB01 | 3.30.230.90 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.61 | 42.0 | 3.26e-01 | 74.5% | 47.1% |
| 1ygyA04 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.60 | 48.0 | 4.31e-01 | 92.2% | 97.4% |
| 3tzgA00 | 2.40.160.150 | Mainly Beta › Beta Barrel › Porin › | 0.60 | 52.0 | 3.36e-01 | 98.0% | 98.7% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.60 | 51.0 | 3.60e-01 | 98.0% | 35.9% |
| 1tluA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.60 | 49.0 | 3.93e-01 | 100.0% | 90.6% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.60 | 50.0 | 4.20e-01 | 98.0% | 63.8% |
| 4llgM00 | 3.10.20.510 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor | 0.60 | 47.0 | 4.77e-01 | 98.0% | 94.0% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.59 | 50.0 | 4.17e-01 | 98.0% | 65.2% |
| 4lejA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.58 | 35.0 | 2.39e-01 | 100.0% | 16.9% |
| 2kl5A00 | 3.50.4.20 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Uncharacterised protein DUF1027 | 0.58 | 47.0 | 3.83e-01 | 98.0% | 50.0% |
| 4q0yA00 | 2.60.40.4400 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.57 | 49.0 | 3.73e-01 | 100.0% | 56.5% |
| 4dmiA02 | 2.60.120.1010 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 47.0 | 3.56e-01 | 100.0% | 63.5% |
| 2e9wA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 42.0 | 3.60e-01 | 98.0% | 50.0% |
| 4hfqA02 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.56 | 44.0 | 3.41e-01 | 96.1% | 56.8% |
| 2v72A00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.55 | 47.0 | 3.53e-01 | 100.0% | 39.4% |
| 2hq9B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.55 | 46.0 | 3.50e-01 | 100.0% | 48.2% |
| 6tepC02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.55 | 44.0 | 3.16e-01 | 96.1% | 95.0% |
| 2la7A01 | 2.40.128.270 | Mainly Beta › Beta Barrel › Lipocalin › | 0.55 | 44.0 | 3.47e-01 | 100.0% | 93.0% |
| 1h3dA03 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 43.0 | 4.04e-01 | 94.1% | 92.5% |
| 2i44B00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.54 | 45.0 | 2.83e-01 | 100.0% | 94.6% |
| 6kghA02 | 3.30.450.330 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 41.0 | 2.99e-01 | 86.3% | 77.3% |
| 4h3wA02 | 2.60.120.1260 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 42.0 | 3.22e-01 | 100.0% | 67.8% |
| 3eipA00 | 3.10.50.20 | Alpha Beta › Roll › Chitinase A; domain 3 › Cloacin immunity protein | 0.54 | 42.0 | 3.81e-01 | 100.0% | 94.0% |
| 4d0qA00 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.53 | 43.0 | 3.18e-01 | 98.0% | 54.0% |
| 2jvuA00 | 2.60.40.2290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 46.0 | 3.74e-01 | 100.0% | 79.6% |
| 5h66A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.52 | 46.0 | 3.14e-01 | 100.0% | 39.6% |
| 2ou5A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 42.0 | 3.05e-01 | 98.0% | 42.9% |
| 4harA00 | 3.10.50.50 | Alpha Beta › Roll › Chitinase A; domain 3 › Rubella virus capsid protein | 0.51 | 42.0 | 3.52e-01 | 98.0% | 93.9% |
| 2lxxA00 | 3.40.20.10 | Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin | 0.51 | 42.0 | 3.16e-01 | 100.0% | 33.6% |
| 2o3iA01 | 3.40.1610.10 | Alpha Beta › 3-Layer(aba) Sandwich › CV3147-like fold › CV3147-like domain | 0.51 | 38.0 | 2.62e-01 | 90.2% | 23.7% |
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 43.0 | 3.82e-01 | 100.0% | 79.2% |
| 4d8mA02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.51 | 41.0 | 3.00e-01 | 100.0% | 50.6% |
| 2j9uB00 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.50 | 39.0 | 4.03e-01 | 94.1% | 100.0% |
| 4ca1B02 | 2.60.210.10 | Mainly Beta › Sandwich › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A › Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 0.50 | 41.0 | 3.14e-01 | 96.1% | 66.7% |
| 1wlfA01 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.50 | 39.0 | 3.49e-01 | 94.1% | 72.6% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3276129 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.77 | 67.0 | 5.57e-01 | 100.0% | 81.1% |
| 5067865 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.66 | 55.0 | 5.09e-01 | 100.0% | 77.1% |
| 1318644 | 304.4.1.20 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg2 | 0.66 | 55.0 | 4.79e-01 | 98.0% | 89.0% |
| 4974581 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.66 | 53.0 | 4.32e-01 | 98.0% | 99.1% |
| 4939739 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.66 | 54.0 | 5.28e-01 | 100.0% | 91.5% |
| 3932280 | 2006.1.6.1 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › VWA | 0.66 | 48.0 | 2.89e-01 | 80.4% | 16.5% |
| 4962335 | 3115.5.1.1 ↗ | a+b two layers › GP2-like › phenylacetate-CoA oxygenase subunit PaaB › phenylacetate-CoA oxygenase subunit PaaB › PaaB | 0.64 | 53.0 | 4.99e-01 | 98.0% | 78.5% |
| 5083040 | 304.128.1.0 ↗ | a+b two layers › Alpha-beta plaits › ferredoxin-like domain in periplasmic region of MacB › ferredoxin-like domain in periplasmic region of MacB | 0.64 | 50.0 | 4.26e-01 | 98.0% | 94.0% |
| 2323826 | 4187.2.1.1 ↗ | a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 › NAGPA | 0.63 | 51.0 | 4.60e-01 | 98.0% | 65.4% |
| 2831852 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.63 | 51.0 | 4.28e-01 | 100.0% | 53.5% |
| 5080205 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.61 | 49.0 | 4.96e-01 | 100.0% | 96.0% |
| 3774738 | 7529.1.1.11 ↗ | a/b three-layered sandwiches › Macro domain-like › Macro domain-like › Macro domain-like › DUF2362 | 0.60 | 50.0 | 4.33e-01 | 98.0% | 68.2% |
| 3560901 | 601.19.1.20 ↗ | alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Fy-3 | 0.60 | 49.0 | 4.48e-01 | 98.0% | 77.3% |
| 3842874 | 221.1.1.6 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA | 0.60 | 45.0 | 3.71e-01 | 100.0% | 41.9% |
| 3857887 | 5094.1.1.11 ↗ | a+b duplicates or obligate multimers › OmpH-like › OmpH-like › OmpH-like › Fy-3 | 0.60 | 50.0 | 4.49e-01 | 98.0% | 77.3% |
| 4944155 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.59 | 44.0 | 3.25e-01 | 84.3% | 29.0% |
| 3668699 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.59 | 48.0 | 4.30e-01 | 100.0% | 65.0% |
| 4109775 | 2492.1.1.47 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › YwqJ-deaminase | 0.59 | 47.0 | 3.33e-01 | 100.0% | 66.0% |
| 3905302 | 284.1.3.8 ↗ | a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › Fy-3 | 0.59 | 47.0 | 4.19e-01 | 98.0% | 68.2% |
| 5055297 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 52.0 | 4.41e-01 | 100.0% | 65.9% |
| 5007871 | 304.25.1.1 ↗ | a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer | 0.58 | 47.0 | 4.04e-01 | 98.0% | 100.0% |
| 3216210 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.58 | 45.0 | 4.60e-01 | 100.0% | 100.0% |
| 3840114 | 299.1.1.1 ↗ | a+b complex topology › YbaK/ProRS associated domain › YbaK/ProRS associated domain › YbaK/ProRS associated domain › tRNA_edit | 0.58 | 48.0 | 3.57e-01 | 98.0% | 80.0% |
| 3499381 | 2498.1.1.14 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 | 0.58 | 48.0 | 2.78e-01 | 100.0% | 11.8% |
| 3799804 | 2492.1.1.8 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › UPF0172 | 0.58 | 47.0 | 3.24e-01 | 96.1% | 44.7% |
| 3593506 | 11.2.1.12 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DOCK-C2 | 0.57 | 46.0 | 2.90e-01 | 100.0% | 53.7% |
| 3804004 | 221.1.1.237 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DUF4371 | 0.56 | 47.0 | 4.04e-01 | 98.0% | 87.8% |
| 5033328 | 11.1.5.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f | 0.56 | 49.0 | 3.73e-01 | 100.0% | 50.0% |
| 3483062 | 221.1.1.116 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_6 | 0.56 | 45.0 | 3.54e-01 | 96.1% | 65.8% |
| 3577630 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.55 | 46.0 | 3.54e-01 | 98.0% | 80.0% |
| 5078277 | 810.1.1.0 ↗ | a+b two layers › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) | 0.54 | 36.0 | 2.37e-01 | 70.6% | 85.1% |
| 4981466 | 11.1.1.32 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Desulfoferrodox | 0.53 | 47.0 | 3.91e-01 | 100.0% | 56.7% |
| 3472961 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.53 | 37.0 | 2.76e-01 | 82.4% | 24.7% |
| 4625721 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.53 | 41.0 | 3.41e-01 | 100.0% | 47.5% |
| 4939058 | 3457.1.1.3 ↗ | alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Arc_PepC_II | 0.52 | 44.0 | 2.85e-01 | 96.1% | 58.0% |
| 3744271 | 3662.1.1.3 ↗ | a+b two layers › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › Proteasome assembling chaperone 3 (PAC3)-related › PAC4 | 0.52 | 43.0 | 3.41e-01 | 98.0% | 62.5% |
| 3396396 | 10.32.1.216 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › MAM | 0.52 | 44.0 | 2.97e-01 | 100.0% | 34.4% |
| 3646564 | 109.4.1.1267 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif | 0.52 | 40.0 | 2.37e-01 | 94.1% | 15.3% |
| 3645596 | 109.4.1.1476 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, DYW_deaminase, E_motif | 0.51 | 41.0 | 2.37e-01 | 94.1% | 16.6% |
| 4962193 | 302.4.1.1 ↗ | a+b two layers › Reverse ferredoxin › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › a+b domain in Acetophenone carboxylase (Apc) alpha subunit › Hydant_A_C | 0.51 | 42.0 | 3.47e-01 | 98.0% | 80.0% |
| 4964955 | 223.2.1.63 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › DUF7522 | 0.51 | 45.0 | 3.34e-01 | 100.0% | 65.9% |
| 3785051 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 37.0 | 3.40e-01 | 92.2% | 75.3% |
| 4944565 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.50 | 44.0 | 3.13e-01 | 100.0% | 93.7% |
| 3603250 | 223.2.1.5 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Robl_LC7 | 0.50 | 44.0 | 3.39e-01 | 100.0% | 65.0% |
| 3592899 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.50 | 38.0 | 2.61e-01 | 88.2% | 51.2% |