←Back to structures

MT104122.1__QIG62599.1__X__00085

Bact-Vir

MT104122.1__QIG62599.1__X__00085

Identity

Accession:
MT104122 ↗
Kingdom:
phage

Quality

65.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Sporosarcina_phage_Lietuvens

TaxID: 2713145

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 30-128
PDB
Domain cluster: rep: IMGVR_UViG_2875764417_000001-2875764417-2875765860__D21-121
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 32.0 3.12e-01 100.0% 50.0%
2greF02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.56 40.0 4.39e-01 96.0% 96.2%
4r9iA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.51 27.0 2.76e-01 100.0% 51.0%
1vwxk00 3.30.720.90 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.51 25.0 2.89e-01 100.0% 60.9%
ECOD (24)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4930010 1.1.7.141 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MazE_antitoxin 0.73 51.0 5.28e-01 96.0% 75.8%
4064772 1.1.3.1 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ 0.70 63.0 5.49e-01 100.0% 79.3%
5013669 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.69 52.0 5.62e-01 96.0% 94.1%
4478720 1.1.3.1 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ 0.68 62.0 5.63e-01 100.0% 93.8%
4158735 1.1.3.1 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ 0.68 62.0 5.50e-01 100.0% 83.6%
4214686 1.1.3.1 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ 0.68 61.0 5.36e-01 100.0% 80.7%
3963810 1.1.3.1 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ 0.68 61.0 5.44e-01 100.0% 82.9%
3164912 1.1.3.1 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ 0.67 61.0 5.34e-01 100.0% 82.8%
4389342 1.1.3.1 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ 0.67 61.0 5.40e-01 100.0% 85.7%
4436971 1.1.3.1 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ 0.67 61.0 5.33e-01 100.0% 83.4%
4038019 1.1.3.1 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ 0.67 60.0 5.32e-01 100.0% 83.4%
4058682 1.1.3.1 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ 0.67 60.0 5.34e-01 100.0% 82.9%
4662972 1.1.3.0 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB 0.67 60.0 5.48e-01 100.0% 91.5%
4333385 1.1.3.1 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ 0.66 59.0 5.31e-01 100.0% 83.6%
5013280 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.66 52.0 5.29e-01 96.0% 86.3%
4494566 1.1.3.1 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ 0.66 59.0 5.23e-01 100.0% 82.8%
4059991 1.1.3.1 ↗ beta barrels › cradle loop barrel › RIFT-related › AbrB › MraZ 0.65 58.0 5.29e-01 100.0% 88.9%
5012253 1.1.7.141 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MazE_antitoxin 0.65 52.0 4.84e-01 96.0% 68.0%
5012903 1.1.7.141 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › MazE_antitoxin 0.64 53.0 5.37e-01 96.0% 88.0%
5012252 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.64 53.0 5.11e-01 96.0% 79.1%
2814146 896.1.1.1 ↗ a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Ribosomal_L38e 0.63 30.0 3.38e-01 86.9% 57.9%
3944524 295.1.1.26 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › BssS 0.54 26.0 3.06e-01 82.8% 64.3%
4843438 211.1.1.0 ↗ a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.53 25.0 3.26e-01 100.0% 82.4%
5070513 4955.1.1.0 ↗ a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit 0.50 36.0 3.91e-01 98.0% 93.8%
D2 high residues 150-251
PDB