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MT104466.1__QJD54644.1__PssvBMR2_gp01__00001

Bact-Vir

MT104466.1__QJD54644.1__PssvBMR2_gp01__00001

Identity

Accession:
MT104466 ↗
Kingdom:
phage

Quality

71.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-51
PDB
Domain cluster: representative
CATH (89)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zpvA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.81 68.0 5.57e-01 100.0% 51.8%
1b24A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.78 66.0 5.29e-01 100.0% 49.5%
7qssA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.75 58.0 3.89e-01 100.0% 21.8%
3aawA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.75 61.0 4.19e-01 100.0% 26.1%
2jheA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.75 59.0 4.94e-01 100.0% 50.6%
2gjhA00 3.30.1070.20 Alpha Beta › 2-Layer Sandwich › Cell Cycle; Chain A › 0.74 62.0 5.89e-01 100.0% 82.5%
3hz7A00 3.30.110.40 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain 0.73 57.0 4.99e-01 100.0% 56.2%
4nzrM03 3.30.110.180 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › 0.73 59.0 4.39e-01 100.0% 35.0%
3onqA02 3.30.70.2730 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.73 63.0 5.24e-01 100.0% 55.6%
5wt3A01 3.30.70.2580 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 57.0 5.12e-01 100.0% 63.1%
2yx1A01 3.30.70.2580 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 57.0 5.14e-01 100.0% 63.6%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.72 59.0 4.13e-01 100.0% 67.7%
4g6tA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.72 47.0 3.38e-01 76.1% 24.2%
2m9kA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.71 54.0 4.49e-01 100.0% 45.2%
2f1fA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.70 59.0 5.07e-01 100.0% 58.2%
5gt8D02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.70 51.0 3.84e-01 100.0% 31.1%
2jvfA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.70 59.0 4.79e-01 100.0% 50.0%
4mo0A00 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.69 52.0 4.44e-01 100.0% 49.4%
2qyxB01 3.30.70.1360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › mj0159-like 0.69 56.0 4.46e-01 100.0% 42.2%
4dezA01 3.30.70.270 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Reverse transcriptase/Diguanylate cyclase domain 0.69 50.0 3.98e-01 100.0% 37.4%
3evzA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.69 52.0 3.72e-01 100.0% 25.3%
2lrrA00 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.69 53.0 4.75e-01 100.0% 58.6%
1mwyA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 54.0 4.75e-01 100.0% 57.5%
2wnyA00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.69 58.0 4.21e-01 100.0% 34.3%
3mmlF01 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.69 52.0 4.48e-01 100.0% 50.6%
5mmjh01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.69 53.0 4.58e-01 100.0% 53.3%
1fvqA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.69 54.0 4.75e-01 100.0% 58.3%
1x19A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 53.0 3.81e-01 100.0% 26.9%
3grzB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.68 52.0 3.52e-01 100.0% 21.2%
1b4bA00 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.68 50.0 4.47e-01 100.0% 54.9%
2dbbA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.67 50.0 4.16e-01 100.0% 43.0%
1xebA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.67 54.0 3.77e-01 89.1% 89.3%
3mahA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.67 55.0 4.92e-01 100.0% 63.8%
2gukA00 3.30.2190.10 Alpha Beta › 2-Layer Sandwich › PG1857-like › PG1857-like 0.67 50.0 3.96e-01 100.0% 36.9%
5zneA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.67 51.0 4.57e-01 100.0% 57.5%
2crlA01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.66 51.0 4.60e-01 100.0% 59.4%
3c0wA02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.66 51.0 4.14e-01 100.0% 41.7%
1vw4700 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.66 50.0 4.00e-01 100.0% 39.6%
3uc4A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.66 56.0 4.66e-01 100.0% 57.6%
3tviA02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.65 55.0 3.88e-01 100.0% 28.9%
2cyyA02 3.30.70.920 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain 0.65 47.0 3.80e-01 82.6% 38.9%
2b4vA03 3.30.70.1970 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.65 51.0 4.20e-01 100.0% 45.5%
2amyA02 3.30.1240.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › Eukaryotic phosphomannomutase, cap domain 0.65 49.0 3.84e-01 84.8% 46.1%
3keyA02 3.30.1370.230 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › Stn1, C-terminal wHTH domain 0.65 51.0 4.38e-01 100.0% 68.2%
3p04A00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.65 50.0 4.42e-01 100.0% 55.8%
1vbkA01 3.30.70.1510 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like 0.64 52.0 4.51e-01 100.0% 63.9%
4aukA01 3.30.70.2810 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 49.0 4.38e-01 100.0% 55.7%
2j0wA04 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 53.0 4.60e-01 100.0% 58.7%
1dd5A02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.64 46.0 4.10e-01 100.0% 50.7%
3aqoA01 3.30.70.3400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.64 55.0 4.70e-01 100.0% 62.5%
4pwuC00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 51.0 4.41e-01 100.0% 55.1%
1q5yC00 3.30.70.1150 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2 0.64 52.0 4.49e-01 100.0% 56.1%
2dgtA01 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.64 47.0 4.18e-01 100.0% 53.4%
4dzrA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.64 50.0 3.58e-01 100.0% 27.0%
1i94H01 3.30.1370.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.64 51.0 4.40e-01 100.0% 53.8%
1itpA00 3.30.70.80 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Peptidase S8 propeptide/proteinase inhibitor I9 0.64 48.0 4.31e-01 100.0% 55.8%
2pt7G02 3.30.1370.180 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.63 49.0 4.49e-01 100.0% 64.2%
3ng0A02 3.30.590.10 Alpha Beta › 2-Layer Sandwich › Creatine Kinase; Chain A, domain 2 › Glutamine synthetase/guanido kinase, catalytic domain 0.63 51.0 3.12e-01 100.0% 27.2%
4q5eA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.62 49.0 4.43e-01 100.0% 66.7%
5yjlB01 3.30.460.30 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Glutamyl-tRNA reductase, N-terminal domain 0.62 49.0 3.47e-01 91.3% 29.8%
1s7hA02 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.62 46.0 3.98e-01 100.0% 48.8%
1vk8A00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 47.0 3.82e-01 87.0% 82.8%
2m2jA00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.61 47.0 4.35e-01 100.0% 70.4%
2iboA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 47.0 3.87e-01 87.0% 86.5%
1lxnA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 47.0 3.81e-01 100.0% 42.9%
1tuwA00 3.30.70.1090 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Dimeric alpha+beta barrel. 0.61 49.0 3.94e-01 100.0% 47.2%
2ebbA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.60 47.0 3.92e-01 100.0% 45.8%
5hvqC01 3.90.1150.220 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.60 44.0 3.75e-01 80.4% 88.7%
4annA00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.60 48.0 3.32e-01 100.0% 23.9%
2yweA03 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.60 46.0 4.08e-01 100.0% 56.1%
4qpkB02 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.59 50.0 3.69e-01 100.0% 48.5%
7uvpA02 3.30.70.870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Elongation Factor G (Translational Gtpase), domain 3 0.59 46.0 4.19e-01 100.0% 62.3%
2phcB01 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.59 48.0 4.12e-01 100.0% 55.4%
3zxoA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.59 49.0 3.75e-01 100.0% 40.0%
3gkuA03 3.30.1370.50 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain 0.59 44.0 3.99e-01 100.0% 57.7%
3gu3A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.58 46.0 3.27e-01 100.0% 26.3%
1yqhA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 44.0 3.53e-01 100.0% 39.4%
4evuB00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.58 44.0 4.16e-01 100.0% 72.1%
2vd5B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 46.0 3.22e-01 100.0% 28.3%
1dcoA00 3.30.1360.20 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase 0.57 47.0 3.82e-01 100.0% 46.5%
1lxjA00 3.30.70.930 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 43.0 3.48e-01 100.0% 40.8%
3oreA01 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.56 44.0 4.10e-01 100.0% 69.7%
6lcqA00 3.30.30.10 Alpha Beta › 2-Layer Sandwich › Defensin A-like › Knottin, scorpion toxin-like 0.55 42.0 4.12e-01 100.0% 79.6%
1zhsA01 3.30.1490.230 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › 0.54 43.0 4.21e-01 100.0% 87.3%
3sqnB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 42.0 4.01e-01 97.8% 80.3%
2cqhA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.53 43.0 3.53e-01 100.0% 45.2%
4rayA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 45.0 3.71e-01 100.0% 91.8%
3to8A02 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.51 38.0 3.28e-01 100.0% 45.8%
4g08A02 3.30.1370.120 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › 0.50 41.0 3.68e-01 100.0% 62.9%
ECOD (91)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3924077 304.163.1.0 a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain 0.79 65.0 5.37e-01 100.0% 52.5%
5010511 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.78 63.0 5.66e-01 100.0% 64.6%
3276287 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.78 66.0 5.13e-01 100.0% 44.8%
3445077 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.76 64.0 5.37e-01 100.0% 55.4%
3833178 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.74 62.0 5.30e-01 100.0% 57.5%
4981261 304.24.1.0 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like 0.74 58.0 5.02e-01 100.0% 54.7%
4608678 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.74 57.0 4.80e-01 100.0% 50.0%
3683127 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.73 59.0 5.68e-01 100.0% 80.0%
3784937 304.8.1.10 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_7 0.73 58.0 4.08e-01 100.0% 28.0%
5049444 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.72 53.0 3.30e-01 80.4% 40.8%
3521668 304.8.1.49 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › R1_ABCA1 0.72 56.0 4.80e-01 100.0% 52.5%
5042680 304.24.1.5 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › Trm5_N 0.72 57.0 5.28e-01 100.0% 70.0%
3818197 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.71 58.0 5.06e-01 100.0% 58.7%
3403703 304.110.1.0 a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like 0.71 57.0 4.54e-01 100.0% 41.9%
3388102 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.71 55.0 4.99e-01 100.0% 61.5%
3951206 3012.1.1.1 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase 0.71 56.0 4.75e-01 100.0% 52.5%
5076583 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.71 57.0 4.94e-01 100.0% 57.3%
5049638 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.70 59.0 5.50e-01 100.0% 75.0%
4130731 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.70 60.0 4.22e-01 100.0% 30.7%
394278 304.122.1.1 a+b two layers › Alpha-beta plaits › Nitrogen repressor-like proteins › Nitrogen repressor-like proteins › NRD1_2 0.70 58.0 5.04e-01 100.0% 59.7%
3411894 3012.1.1.0 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain 0.70 56.0 4.73e-01 100.0% 52.5%
2122949 2006.1.1.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.70 54.0 3.48e-01 100.0% 17.2%
4675864 207.12.1.2 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Protein M antibody-binding region › Protein M antibody-binding region › M_large_dom 0.70 58.0 3.44e-01 100.0% 12.1%
4003644 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.69 57.0 3.94e-01 100.0% 25.7%
5079433 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.69 57.0 3.90e-01 100.0% 25.4%
4561991 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.69 55.0 5.05e-01 100.0% 66.2%
1125246 306.3.1.2 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › Img2 0.69 54.0 4.79e-01 100.0% 57.9%
4113263 304.8.1.48 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › MNHE 0.69 55.0 4.74e-01 100.0% 56.0%
3726512 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.68 58.0 4.86e-01 100.0% 55.0%
None 0.68 56.0 3.58e-01 100.0% 18.0%
3827506 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.68 54.0 4.79e-01 100.0% 60.0%
3614729 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.68 57.0 3.84e-01 100.0% 24.2%
3806470 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.68 51.0 4.84e-01 100.0% 68.3%
4946195 304.120.1.19 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI › THUMP 0.68 53.0 4.85e-01 100.0% 64.6%
3282317 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.68 52.0 4.81e-01 100.0% 65.1%
4996908 304.8.1.4 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C 0.68 57.0 4.71e-01 100.0% 53.4%
4939665 304.120.1.0 a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.67 55.0 4.80e-01 100.0% 58.7%
3795151 304.8.1.71 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › DUF7636 0.67 54.0 4.40e-01 100.0% 46.0%
3739756 304.7.1.2 a+b two layers › Alpha-beta plaits › Protease propeptides/inhibitors › Protease propeptides/inhibitors › Inhibitor_I9 0.67 51.0 4.51e-01 100.0% 56.0%
5022357 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.66 50.0 4.71e-01 100.0% 68.3%
4986323 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.66 51.0 4.65e-01 100.0% 63.1%
5015712 2003.1.5.54 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_10 0.66 53.0 3.42e-01 100.0% 17.4%
4976823 305.2.1.0 a+b two layers › DCoH-like › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) › Pterin-4a-carbinolamine dehydratase (PCD)/dimerization cofactor of HNF1 (DCoH) 0.66 50.0 4.39e-01 100.0% 53.3%
5065226 304.4.1.1 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › AsnC_trans_reg 0.66 51.0 4.24e-01 100.0% 45.3%
3220665 4014.1.1.1 a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV 0.66 54.0 3.76e-01 100.0% 26.3%
3346483 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.66 52.0 4.38e-01 100.0% 50.6%
3250936 304.15.1.0 a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain 0.66 51.0 4.66e-01 100.0% 62.9%
3191211 304.8.1.21 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_9 0.65 56.0 4.66e-01 100.0% 51.8%
3521725 327.11.2.55 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › PF26774 0.65 56.0 4.64e-01 100.0% 54.1%
3799570 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.65 53.0 3.84e-01 100.0% 30.3%
5008041 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.65 48.0 3.67e-01 100.0% 31.1%
3458310 304.9.1.20 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_8 0.64 52.0 4.05e-01 100.0% 39.1%
3364940 304.9.1.47 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › DUF4283 0.64 50.0 4.24e-01 100.0% 50.6%
3277529 4014.1.1.1 a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › DNA_topoisoIV 0.64 52.0 3.71e-01 100.0% 28.7%
4943420 3501.1.1.2 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › DUF2067 0.63 48.0 4.35e-01 100.0% 60.0%
4118092 304.28.1.4 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › SecD_1st 0.63 52.0 4.58e-01 100.0% 64.0%
5083287 2003.1.5.80 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_24 0.63 47.0 3.18e-01 87.0% 37.9%
4512489 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.63 47.0 4.40e-01 100.0% 64.6%
4978587 1075.1.2.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain 0.63 48.0 2.78e-01 100.0% 7.8%
4337990 387.1.5.0 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like 0.62 47.0 4.29e-01 100.0% 60.0%
4929272 304.22.1.0 a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain 0.62 48.0 4.17e-01 100.0% 52.5%
3819737 387.1.5.0 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like 0.62 53.0 5.23e-01 100.0% 98.0%
4289040 304.41.1.1 a+b two layers › Alpha-beta plaits › Glutamyl tRNA-reductase catalytic, N-terminal domain › Glutamyl tRNA-reductase catalytic, N-terminal domain › GlutR_N 0.61 53.0 3.64e-01 100.0% 31.2%
None 0.61 53.0 3.35e-01 100.0% 19.2%
5061509 304.3.1.1 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain › HMA 0.61 46.0 4.26e-01 100.0% 63.1%
3966114 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.61 47.0 4.06e-01 100.0% 50.6%
5046293 304.4.1.0 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel 0.61 43.0 3.68e-01 84.8% 42.2%
4330210 327.6.1.6 a+b two layers › Alpha-lytic protease prodomain-like › Fe-S cluster assembly (FSCA) domain-like › Fe-S cluster assembly (FSCA) domain-like › Secretin 0.61 48.0 2.99e-01 89.1% 18.5%
3344177 387.1.5.0 few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like 0.61 51.0 5.14e-01 100.0% 97.8%
3500427 3914.1.1.2 alpha bundles › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › TMEM16 lipid scramblase transmembrane domain › Anoctamin,Anoct_dimer 0.60 46.0 2.60e-01 100.0% 6.2%
3208574 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.59 46.0 2.67e-01 87.0% 86.7%
4497244 304.112.1.0 a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain 0.59 48.0 4.17e-01 100.0% 57.3%
5000359 304.24.1.3 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III 0.58 49.0 4.30e-01 100.0% 62.7%
4676848 304.24.1.3 a+b two layers › Alpha-beta plaits › EF-G C-terminal domain-like › EF-G C-terminal domain-like › EFG_III 0.58 44.0 3.98e-01 100.0% 57.3%
3508327 5.1.4.265 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR3_1st 0.58 43.0 2.54e-01 82.6% 25.3%
5036372 320.2.1.1 a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 0.58 47.0 4.31e-01 100.0% 66.2%
4947478 304.26.1.0 a+b two layers › Alpha-beta plaits › MTH1187/YkoF-like › MTH1187/YkoF-like 0.58 44.0 3.69e-01 100.0% 45.3%
3594650 4014.1.1.0 a+b two layers › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase › a+b domain in type II DNA topoisomerase 0.57 45.0 3.29e-01 100.0% 28.7%
4944966 304.3.1.0 a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain 0.56 44.0 3.98e-01 100.0% 60.0%
4283825 323.1.1.5 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation 0.56 44.0 3.13e-01 100.0% 49.7%
5000814 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.56 42.0 3.86e-01 100.0% 60.0%
4324421 304.162.1.1 a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain › CinA_KH 0.56 42.0 3.83e-01 100.0% 58.7%
3516321 4012.4.1.1 a+b two layers › SSHS domain › DPAGT1 insertion domain › DPAGT1 insertion domain › DPAGT1_ins 0.56 45.0 4.56e-01 100.0% 93.3%
4016270 304.112.1.0 a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain 0.56 46.0 3.89e-01 100.0% 52.9%
3201830 323.1.1.0 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases 0.55 44.0 3.12e-01 100.0% 51.1%
3216083 4012.4.1.1 a+b two layers › SSHS domain › DPAGT1 insertion domain › DPAGT1 insertion domain › DPAGT1_ins 0.55 44.0 4.52e-01 100.0% 93.3%
3879988 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.55 45.0 3.01e-01 100.0% 43.7%
3548774 4012.4.1.1 a+b two layers › SSHS domain › DPAGT1 insertion domain › DPAGT1 insertion domain › DPAGT1_ins 0.54 47.0 4.73e-01 97.8% 100.0%
5058544 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.53 46.0 2.91e-01 100.0% 18.5%
4252299 206.1.1.27 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › YukC 0.53 45.0 2.98e-01 100.0% 21.8%
5021917 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.51 42.0 3.63e-01 100.0% 58.7%