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MT104474.1__QJD55190.1__Psm1vBMR14_gp38c__00038
Bact-VirMT104474.1__QJD55190.1__Psm1vBMR14_gp38c__00038
Identity
- Accession:
- MT104474 ↗
- Kingdom:
- phage
Quality
76.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 7-192
Domain cluster:
rep: HQ332139.1__AGF91556.1__PRRG_00047__00045__D4-148
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1cukA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.84 | 30.0 | 5.38e-01 | 97.3% | 98.5% |
| 4jg2A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.83 | 66.0 | 6.70e-01 | 100.0% | 82.2% |
| 4gs3A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.76 | 37.0 | 5.29e-01 | 100.0% | 97.8% |
| 4glaC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 35.0 | 5.10e-01 | 100.0% | 95.5% |
| 2xgtB01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 34.0 | 4.65e-01 | 100.0% | 82.2% |
| 4gnxB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.74 | 33.0 | 4.12e-01 | 100.0% | 66.4% |
| 3nemA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 34.0 | 4.56e-01 | 100.0% | 80.0% |
| 1je5A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.72 | 63.0 | 6.41e-01 | 100.0% | 92.3% |
| 2zxrA01 | 2.40.50.460 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.72 | 30.0 | 3.31e-01 | 100.0% | 46.2% |
| 1jb3A00 | 2.40.50.120 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.71 | 40.0 | 4.74e-01 | 100.0% | 79.5% |
| 4pofA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 35.0 | 4.64e-01 | 100.0% | 87.5% |
| 2hqlA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.69 | 35.0 | 4.92e-01 | 98.4% | 100.0% |
| 1v1qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 37.0 | 4.78e-01 | 100.0% | 90.9% |
| 1ue6D00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 37.0 | 4.83e-01 | 100.0% | 94.2% |
| 6ro0D00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.67 | 37.0 | 4.81e-01 | 100.0% | 92.7% |
| 2vl6A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 37.0 | 4.66e-01 | 99.5% | 89.3% |
| 3mxnB00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.66 | 32.0 | 3.80e-01 | 100.0% | 67.2% |
| 2iciA02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 30.0 | 4.33e-01 | 99.5% | 100.0% |
| 1eu3A02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.65 | 30.0 | 4.41e-01 | 99.5% | 100.0% |
| 2z4hA02 | 2.40.50.540 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NlpE, C-terminal domain | 0.63 | 30.0 | 4.20e-01 | 99.5% | 94.2% |
| 5fkaC02 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.63 | 29.0 | 4.20e-01 | 99.5% | 98.8% |
| 2wkcB00 | 2.40.50.400 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Lactococcus phage single-stranded DNA binding protein | 0.62 | 31.0 | 4.35e-01 | 100.0% | 98.9% |
| 3nwsA01 | 2.40.50.800 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 37.0 | 4.28e-01 | 100.0% | 80.1% |
| 3qwnD01 | 2.40.50.500 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NigD-like N-terminal OB domain | 0.61 | 26.0 | 3.86e-01 | 97.8% | 97.1% |
| 1jt8A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.60 | 26.0 | 3.34e-01 | 100.0% | 67.6% |
ECOD (48)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2132736 | 2.1.1.53 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Enc34_ssDNA-bd | 0.83 | 64.0 | 6.55e-01 | 100.0% | 81.6% |
| 235847 | 2.1.1.53 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Enc34_ssDNA-bd | 0.83 | 66.0 | 6.91e-01 | 100.0% | 87.9% |
| 4377694 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.77 | 38.0 | 5.48e-01 | 98.4% | 100.0% |
| 3208585 | 2.1.1.59 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ten1 | 0.76 | 37.0 | 4.96e-01 | 100.0% | 86.0% |
| 3963927 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.76 | 36.0 | 4.71e-01 | 100.0% | 78.2% |
| 3963505 | 2.1.1.85 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecJ_OB | 0.74 | 32.0 | 4.19e-01 | 98.9% | 71.4% |
| 4600598 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 35.0 | 4.48e-01 | 100.0% | 74.8% |
| 5045436 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 31.0 | 4.02e-01 | 100.0% | 66.4% |
| 5058787 | 2.1.1.85 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecJ_OB | 0.73 | 33.0 | 4.22e-01 | 98.9% | 70.9% |
| 5066724 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.73 | 34.0 | 4.54e-01 | 100.0% | 80.0% |
| 5043665 | 2.1.1.15 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon | 0.73 | 34.0 | 4.82e-01 | 100.0% | 89.5% |
| 379 | 2.1.1.108 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SBB_T7 | 0.72 | 63.0 | 6.41e-01 | 100.0% | 92.3% |
| 3604594 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.71 | 35.0 | 4.61e-01 | 100.0% | 83.8% |
| 5007515 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 37.0 | 3.76e-01 | 100.0% | 51.9% |
| 3164580 | 2.1.1.85 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecJ_OB | 0.70 | 34.0 | 4.21e-01 | 100.0% | 73.0% |
| 4031715 | 2.1.1.85 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RecJ_OB | 0.70 | 32.0 | 4.11e-01 | 99.5% | 72.7% |
| 3380367 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.70 | 57.0 | 5.63e-01 | 100.0% | 80.5% |
| 164228 | 2.1.1.54 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3217 | 0.69 | 36.0 | 4.74e-01 | 100.0% | 90.4% |
| 4950417 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 35.0 | 3.51e-01 | 100.0% | 48.4% |
| 4064637 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 34.0 | 3.88e-01 | 100.0% | 62.1% |
| 3488538 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 35.0 | 4.17e-01 | 100.0% | 70.8% |
| 3644737 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.68 | 56.0 | 5.51e-01 | 100.0% | 80.0% |
| 3679990 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 27.0 | 4.24e-01 | 98.4% | 95.7% |
| 2845667 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.67 | 36.0 | 4.69e-01 | 100.0% | 89.9% |
| 3279068 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 36.0 | 4.58e-01 | 100.0% | 87.3% |
| 3595817 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 39.0 | 5.00e-01 | 100.0% | 97.3% |
| 4527565 | 2.1.1.168 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF1980_C | 0.67 | 32.0 | 3.71e-01 | 100.0% | 61.4% |
| 5058885 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.67 | 36.0 | 3.95e-01 | 100.0% | 62.5% |
| 3990037 | 2.1.1.168 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF1980_C | 0.66 | 32.0 | 3.66e-01 | 100.0% | 60.0% |
| 3921372 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 36.0 | 4.39e-01 | 100.0% | 80.8% |
| 4964971 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.66 | 35.0 | 3.26e-01 | 100.0% | 41.7% |
| 3716709 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 37.0 | 4.56e-01 | 100.0% | 85.4% |
| 3956143 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 32.0 | 4.41e-01 | 98.9% | 94.4% |
| 404 | 2.2.1.1 ↗ | beta barrels › OB-fold › Bacterial enterotoxins › Bacterial enterotoxins › Stap_Strp_toxin | 0.65 | 30.0 | 4.10e-01 | 100.0% | 83.5% |
| 3514126 | 2.1.1.42 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C | 0.64 | 37.0 | 4.25e-01 | 100.0% | 75.7% |
| 4021623 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 37.0 | 4.18e-01 | 100.0% | 74.5% |
| 998700 | 2.18.1.1 ↗ | beta barrels › OB-fold › OB domain in putative lipoprotein BF3042-related proteins › OB domain in putative lipoprotein BF3042-related proteins › NigD_N | 0.63 | 25.0 | 3.83e-01 | 96.8% | 89.3% |
| 3741431 | 2.1.1.42 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C | 0.62 | 37.0 | 4.10e-01 | 100.0% | 73.3% |
| 4216224 | 2.1.1.42 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C | 0.61 | 37.0 | 3.98e-01 | 100.0% | 69.4% |
| 3585962 | 2.1.1.42 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C | 0.58 | 38.0 | 4.07e-01 | 100.0% | 75.6% |
| 4029921 | 2.1.1.42 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Rep_fac-A_C | 0.58 | 36.0 | 3.90e-01 | 100.0% | 71.9% |
| 5055299 | 3781.2.1.1 ↗ | a+b two layers › Ribosomal protein L11/L12e N-terminal domain-like › ssDNA-binding protein ThermoDBP-related › ssDNA-binding protein ThermoDBP-related › ThermoDBP-RP_arch | 0.58 | 30.0 | 3.28e-01 | 100.0% | 56.9% |
| 3739772 | 2.1.1.228 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › MCM_bind | 0.57 | 38.0 | 3.79e-01 | 100.0% | 64.1% |
| 5000726 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 37.0 | 4.38e-01 | 100.0% | 94.6% |
| 3208771 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 36.0 | 3.89e-01 | 100.0% | 75.0% |
| 4618627 | 259.1.1.2 ↗ | a+b two layers › Ribosomal protein L31e-like › Ribosomal protein L31e/gp120 outer domain › Ribosomal protein L31e/gp120 outer domain › Ribosomal_L31e | 0.53 | 27.0 | 3.55e-01 | 98.9% | 88.5% |
| 5035746 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 35.0 | 3.87e-01 | 100.0% | 82.6% |
| 3594714 | 259.1.1.0 ↗ | a+b two layers › Ribosomal protein L31e-like › Ribosomal protein L31e/gp120 outer domain › Ribosomal protein L31e/gp120 outer domain | 0.50 | 27.0 | 3.43e-01 | 99.5% | 88.1% |