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MT118296.1__QIQ65295.1__19_00008__00008
Bact-VirMT118296.1__QIQ65295.1__19_00008__00008
Identity
- Accession:
- MT118296 ↗
- Kingdom:
- phage
Quality
79.4
mean pLDDT
Taxonomy
TaxID: 2719189
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-64
Domain cluster:
representative
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.62 | 49.0 | 4.20e-01 | 91.5% | 60.0% |
| 4hpqB00 | 2.60.270.60 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Autophagy-related protein 31 | 0.58 | 49.0 | 4.04e-01 | 98.3% | 68.7% |
| 3es1A01 | 2.20.70.150 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.58 | 35.0 | 3.99e-01 | 91.5% | 94.6% |
| 1d2oA02 | 2.60.40.1140 | Mainly Beta › Sandwich › Immunoglobulin-like › Collagen-binding surface protein Cna, B-type domain | 0.58 | 48.0 | 4.41e-01 | 94.9% | 95.0% |
| 7ct1A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.58 | 50.0 | 4.47e-01 | 98.3% | 100.0% |
| 1wgrA01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 48.0 | 4.38e-01 | 98.3% | 100.0% |
| 4lduA02 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.56 | 50.0 | 4.11e-01 | 100.0% | 58.5% |
| 3au4A02 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 48.0 | 4.20e-01 | 100.0% | 95.7% |
| 3vhxF00 | 2.60.40.4330 | Mainly Beta › Sandwich › Immunoglobulin-like › Kinesin-like protein Kif23, Arf6-interacting domain | 0.55 | 39.0 | 3.36e-01 | 78.0% | 83.3% |
| 1gh9A00 | 3.90.820.10 | Alpha Beta › Alpha-Beta Complex › Rubredoxin-like › Structural Genomics, Unknown Function 30-nov-00 1gh9 Mol_id | 0.53 | 34.0 | 3.19e-01 | 89.8% | 53.5% |
| 3lxfA00 | 3.10.20.30 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain | 0.53 | 45.0 | 3.80e-01 | 98.3% | 99.0% |
| 5yzzC00 | 2.40.330.10 | Mainly Beta › Beta Barrel › At1g16640 B3 domain › DNA-binding pseudobarrel domain | 0.51 | 41.0 | 3.53e-01 | 98.3% | 58.6% |
| 2gj3A00 | 3.30.450.20 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain | 0.51 | 35.0 | 2.96e-01 | 100.0% | 37.0% |
| 4lduA03 | 2.30.30.1040 | Mainly Beta › Roll › SH3 type barrels. › | 0.51 | 42.0 | 4.05e-01 | 91.5% | 86.8% |
| 1av4A03 | 2.70.98.20 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › Copper amine oxidase, catalytic domain | 0.51 | 40.0 | 2.58e-01 | 100.0% | 80.7% |
| 5hy7B01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.51 | 40.0 | 2.53e-01 | 96.6% | 41.0% |
ECOD (10)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3685895 | 189.1.1.2 ↗ | alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RhoGAP | 0.63 | 51.0 | 3.33e-01 | 89.8% | 73.5% |
| 3802153 | 868.1.1.11 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › DUF7903 | 0.58 | 43.0 | 2.85e-01 | 79.7% | 55.8% |
| 3483270 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.57 | 46.0 | 2.81e-01 | 98.3% | 42.8% |
| 3925677 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.57 | 43.0 | 3.56e-01 | 86.4% | 80.0% |
| 3990151 | 7.1.1.1 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain › PDZ | 0.56 | 42.0 | 3.75e-01 | 83.1% | 67.8% |
| 4942565 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 42.0 | 3.82e-01 | 98.3% | 75.6% |
| 3663192 | 868.1.1.11 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › DUF7903 | 0.52 | 41.0 | 2.90e-01 | 91.5% | 30.7% |
| 3816395 | 1.1.11.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Type II restriction endonuclease effector domain › At2g31720-like | 0.52 | 45.0 | 3.36e-01 | 100.0% | 49.0% |
| 3959244 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.51 | 34.0 | 3.14e-01 | 72.9% | 47.8% |
| 3280248 | 223.1.1.13 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_3 | 0.51 | 34.0 | 2.78e-01 | 72.9% | 31.9% |