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MT118296.1__QIQ65301.1__19_00043__00043
Bact-VirMT118296.1__QIQ65301.1__19_00043__00043
Identity
- Accession:
- MT118296 ↗
- Kingdom:
- phage
Quality
91.6
mean pLDDT
Taxonomy
TaxID: 2719189
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-67
Domain cluster:
representative
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ld7A00 | 6.10.160.20 | Special › Helix non-globular › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › | 0.75 | 54.0 | 4.67e-01 | 84.4% | 51.1% |
| 3l1nA01 | 6.10.140.790 | Special › Helix non-globular › Helix Hairpins › | 0.70 | 40.0 | 4.48e-01 | 100.0% | 72.5% |
| 3axjB02 | 1.20.58.200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 | 0.69 | 49.0 | 4.41e-01 | 73.4% | 89.4% |
| 1tjlA00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.65 | 47.0 | 3.51e-01 | 100.0% | 33.1% |
| 3nvoB02 | 1.20.58.340 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region | 0.65 | 47.0 | 3.77e-01 | 75.0% | 85.3% |
| 7lb8B01 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.65 | 52.0 | 3.32e-01 | 87.5% | 72.6% |
| 1zoyA03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.63 | 49.0 | 4.08e-01 | 85.9% | 78.6% |
| 2dkwA00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.59 | 41.0 | 3.29e-01 | 73.4% | 55.0% |
| 1rm6B02 | 3.30.390.50 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › CO dehydrogenase flavoprotein, C-terminal domain | 0.59 | 50.0 | 4.26e-01 | 95.3% | 65.4% |
| 1pu6A01 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.58 | 50.0 | 4.43e-01 | 96.9% | 98.9% |
| 1ryuA00 | 1.10.150.60 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › ARID DNA-binding domain | 0.58 | 40.0 | 3.38e-01 | 100.0% | 40.0% |
| 3keyA01 | 1.10.10.1080 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Stn1, N-terminal wHTH domain | 0.57 | 47.0 | 4.32e-01 | 93.8% | 83.9% |
| 1m3sB00 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.57 | 51.0 | 3.63e-01 | 98.4% | 83.1% |
| 4aflA00 | 6.10.140.1740 | Special › Helix non-globular › Helix Hairpins › | 0.56 | 45.0 | 3.77e-01 | 100.0% | 52.9% |
| 2wg7A00 | 1.20.90.10 | Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain | 0.54 | 48.0 | 3.89e-01 | 98.4% | 56.2% |
| 4is7A02 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.54 | 47.0 | 4.55e-01 | 96.9% | 90.3% |
| 2m7bA00 | 1.10.10.1920 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.53 | 45.0 | 4.25e-01 | 95.3% | 84.4% |
| 1qtqA03 | 1.10.1160.10 | Mainly Alpha › Orthogonal Bundle › Glutamyl-tRNA Synthetase; domain 2 › Glutamyl-trna Synthetase; Domain 2 | 0.53 | 37.0 | 3.46e-01 | 87.5% | 59.5% |
| 2xpzA04 | 1.25.40.320 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Peptidase M1, leukotriene A4 hydrolase/aminopeptidase C-terminal domain | 0.52 | 35.0 | 2.62e-01 | 70.3% | 59.4% |
| 3gzfD00 | 1.10.150.420 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Coronavirus nonstructural protein 4 C-terminus | 0.51 | 40.0 | 3.60e-01 | 87.5% | 79.1% |
| 4rcnA04 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.50 | 41.0 | 2.89e-01 | 95.3% | 88.1% |
| 3icxA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.50 | 44.0 | 4.17e-01 | 100.0% | 82.7% |
ECOD (28)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3268404 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.78 | 59.0 | 6.07e-01 | 89.1% | 85.0% |
| 3368018 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.78 | 59.0 | 5.72e-01 | 79.7% | 78.6% |
| 3724166 | 130.1.1.0 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif | 0.73 | 53.0 | 5.37e-01 | 78.1% | 76.9% |
| 3121 | 130.1.1.5 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › Thymopoietin | 0.72 | 52.0 | 5.75e-01 | 87.5% | 96.0% |
| 3172899 | 130.1.1.16 ↗ | alpha arrays › LEM/SAP HeH motif-like › LEM/SAP HeH motif › LEM/SAP HeH motif › Ish1 | 0.68 | 60.0 | 4.98e-01 | 100.0% | 91.3% |
| 4633539 | 5065.1.1.2 ↗ | alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › FecCD | 0.67 | 54.0 | 3.43e-01 | 89.1% | 73.5% |
| 3809780 | 109.4.1.1391 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sec10_HB, Sec10_N | 0.66 | 44.0 | 2.51e-01 | 100.0% | 6.7% |
| 4997085 | 3352.1.1.2 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › PMT_2 | 0.65 | 50.0 | 3.11e-01 | 85.9% | 61.3% |
| 3673226 | 622.2.1.0 ↗ | alpha bundles › YvfG-like › YvfG-like › YvfG-like | 0.65 | 40.0 | 4.27e-01 | 93.8% | 72.7% |
| 3963743 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.64 | 47.0 | 3.93e-01 | 100.0% | 46.7% |
| 4377859 | 109.1.1.1 ↗ | alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C | 0.62 | 41.0 | 3.06e-01 | 100.0% | 27.2% |
| 3739842 | 108.1.1.0 ↗ | alpha arrays › EF-hand › EF-hand-related › EF-hand | 0.62 | 54.0 | 4.41e-01 | 100.0% | 88.8% |
| 5013136 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.61 | 51.0 | 3.44e-01 | 95.3% | 26.3% |
| 3679962 | 101.28.1.0 ↗ | alpha arrays › HTH › helical bundles in FlhC-like proteins › helical bundles in FlhC-like proteins | 0.61 | 37.0 | 3.96e-01 | 87.5% | 70.9% |
| 6731 | 244.3.1.3 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › SufE/NifU › SufE/NifU › CO_deh_flav_C | 0.59 | 50.0 | 4.26e-01 | 95.3% | 65.4% |
| 3968117 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.59 | 44.0 | 3.46e-01 | 100.0% | 38.5% |
| 4025289 | 192.29.1.197 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › DUF4110 | 0.58 | 49.0 | 4.49e-01 | 100.0% | 71.8% |
| 5016168 | 102.2.1.0 ↗ | alpha arrays › HhH/H2TH › H2TH › H2TH | 0.58 | 49.0 | 4.59e-01 | 95.3% | 100.0% |
| 4010451 | 3788.1.1.15 ↗ | alpha bundles › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › Viral accessory protein x (Vpx) / viral protein r (Vpr) › PF27202 | 0.57 | 48.0 | 4.59e-01 | 90.6% | 80.0% |
| 5016375 | 2484.1.1.13 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RNase_T | 0.56 | 42.0 | 2.99e-01 | 79.7% | 38.4% |
| 4144952 | 2485.1.1.39 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › GST_N_2 | 0.56 | 50.0 | 3.42e-01 | 100.0% | 46.8% |
| 4273250 | 8002.1.1.1 ↗ | alpha bundles › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › Zn-binding domain in glutaminyl-tRNA synthetase › tRNA-synt_1c | 0.54 | 37.0 | 3.94e-01 | 89.1% | 85.5% |
| 3714165 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.53 | 48.0 | 3.39e-01 | 100.0% | 47.9% |
| 4024875 | 4250.1.1.1 ↗ | alpha bundles › Duffy-binding-like domain, N-terminal subdomain › Duffy-binding-like domain, N-terminal subdomain › Duffy-binding-like domain, N-terminal subdomain › Duffy_binding | 0.53 | 44.0 | 3.35e-01 | 96.9% | 66.5% |
| 5040194 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.52 | 46.0 | 3.97e-01 | 96.9% | 82.0% |
| 3789055 | 2006.1.4.10 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › PIN domain-like › PIN_4 | 0.52 | 42.0 | 3.04e-01 | 87.5% | 92.8% |
| 4321331 | 101.11.1.1 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase | 0.52 | 46.0 | 4.12e-01 | 98.4% | 76.7% |
| 3516873 | 159.1.1.3 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › DUF1599 | 0.51 | 42.0 | 3.88e-01 | 89.1% | 98.8% |