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MT119370.1__QIQ67220.1__steven_70__00070

Bact-Vir

MT119370.1__QIQ67220.1__steven_70__00070

Identity

Accession:
MT119370 ↗
Kingdom:
phage

Quality

72.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Lindbergviridae› Pbunavirus› Pseudomonas_phage_steven

TaxID: 2719611

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-78
PDB
Domain cluster: representative
CATH (53)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5e1wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 77.0 5.60e-01 100.0% 44.0%
3u1dB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 74.0 5.79e-01 100.0% 58.7%
5dymA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 76.0 6.73e-01 100.0% 84.4%
1ub9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.80 75.0 6.51e-01 100.0% 74.0%
3l7wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 71.0 6.15e-01 100.0% 74.3%
3l9fA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 72.0 6.57e-01 100.0% 93.3%
2dqlA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.77 69.0 5.80e-01 98.6% 72.2%
4kt5C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 60.0 5.60e-01 97.1% 84.1%
1bm9A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 60.0 5.00e-01 100.0% 72.5%
4mjgA00 3.30.2030.30 Alpha Beta › 2-Layer Sandwich › TBP-like › 0.66 52.0 3.87e-01 85.7% 89.8%
2l2oA00 1.10.10.1540 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Costar domain 0.63 58.0 5.41e-01 100.0% 95.3%
1gd8A00 3.90.1030.10 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 0.61 47.0 4.12e-01 82.9% 93.3%
3cueB00 3.30.1380.20 Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 0.60 50.0 3.93e-01 98.6% 68.3%
1b24A01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.60 51.0 4.71e-01 100.0% 95.8%
5deqB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 49.0 4.74e-01 97.1% 92.8%
2qmlA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.58 48.0 3.62e-01 97.1% 37.8%
4p55B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 46.0 4.18e-01 88.6% 100.0%
3m05B01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 40.0 3.75e-01 84.3% 56.5%
4v19R01 3.90.1030.10 Alpha Beta › Alpha-Beta Complex › 50s Ribosomal Protein L17; Chain: A, › Ribosomal protein L17 0.57 45.0 3.90e-01 87.1% 90.2%
3n5lA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.57 41.0 3.39e-01 90.0% 40.4%
2fsrA00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.57 42.0 3.24e-01 81.4% 92.4%
4lecA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 44.0 3.28e-01 90.0% 45.0%
3duwA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 41.0 3.04e-01 84.3% 35.6%
2dchX01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.55 47.0 4.35e-01 100.0% 77.4%
3swoA02 2.40.110.10 Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.55 44.0 3.92e-01 90.0% 93.3%
3k59A02 3.30.70.2250 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › B family DNA polymerase, N domain, alpha/beta motif 0.55 37.0 3.80e-01 72.9% 73.1%
5a6sA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.55 40.0 3.07e-01 82.9% 89.7%
1repC02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 43.0 4.00e-01 90.0% 98.9%
3hluA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 38.0 3.80e-01 81.4% 72.6%
1ej0A00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.54 42.0 3.26e-01 90.0% 36.1%
4ctaA02 3.30.70.2860 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.54 38.0 3.77e-01 81.4% 70.7%
1g38A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.53 41.0 2.99e-01 87.1% 36.3%
6gdxA00 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.53 40.0 3.54e-01 82.9% 92.5%
1sqhA01 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 41.0 3.27e-01 91.4% 38.0%
1yx0A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 39.0 3.21e-01 84.3% 43.0%
2vi7A00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 41.0 3.27e-01 90.0% 41.1%
2bwnB01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.53 39.0 3.15e-01 84.3% 47.2%
3zqmA00 6.10.140.2160 Special › Helix non-globular › Helix Hairpins › 0.52 36.0 3.81e-01 97.1% 84.7%
7o4xA01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 38.0 3.47e-01 84.3% 56.6%
5jtfB00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 40.0 3.17e-01 90.0% 37.1%
2c12A02 2.40.110.10 Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.52 39.0 3.29e-01 85.7% 90.3%
1vkwA01 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.52 40.0 3.41e-01 85.7% 93.4%
1r2jA02 2.40.110.10 Mainly Beta › Beta Barrel › Butyryl-CoA Dehydrogenase, subunit A; domain 2 › Butyryl-CoA Dehydrogenase, subunit A, domain 2 0.52 43.0 3.85e-01 97.1% 98.1%
2joqA01 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.52 37.0 3.66e-01 84.3% 73.3%
5zhhA02 3.40.190.80 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › 0.51 39.0 3.32e-01 82.9% 50.8%
3wy7D01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.51 42.0 3.58e-01 92.9% 60.0%
6w5yC01 3.90.310.10 Alpha Beta › Alpha-Beta Complex › Viral Glycoprotein Gp70 › ENV polyprotein, receptor-binding domain 0.51 40.0 3.29e-01 91.4% 80.6%
8ediA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 39.0 3.54e-01 88.6% 69.2%
5w2fA01 3.30.780.10 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor Eif1 › SUI1-like domain 0.51 37.0 3.54e-01 81.4% 73.3%
6ztgA01 3.30.70.1070 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Sporulation related repeat 0.50 36.0 3.61e-01 78.6% 84.0%
5b08A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.50 38.0 3.48e-01 85.7% 69.0%
1j4wA01 3.30.1370.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › K Homology domain, type 1 0.50 36.0 3.58e-01 78.6% 79.7%
4ponA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 40.0 3.11e-01 91.4% 53.5%
ECOD (80)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4980261 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.86 80.0 6.86e-01 100.0% 77.1%
5059914 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 78.0 6.78e-01 100.0% 79.0%
5061514 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.83 78.0 5.51e-01 100.0% 40.5%
4998602 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.82 76.0 5.29e-01 100.0% 54.1%
145615 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.81 74.0 5.73e-01 100.0% 56.8%
5035685 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.81 75.0 6.08e-01 100.0% 67.7%
4988082 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.81 72.0 7.23e-01 94.3% 97.1%
3926827 101.1.2.394 ↗ alpha arrays › HTH › HTH › winged helix domain › eWH_GTF3C1 0.80 64.0 3.67e-01 84.3% 14.0%
4938741 101.1.2.14 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.80 73.0 5.72e-01 100.0% 58.6%
4994432 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.80 75.0 6.38e-01 100.0% 75.2%
5016560 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 73.0 6.54e-01 100.0% 83.2%
4966558 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 73.0 6.81e-01 98.6% 94.1%
4942720 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.79 73.0 6.42e-01 100.0% 79.8%
5046134 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 72.0 5.58e-01 100.0% 55.9%
3250041 101.1.2.525 ↗ alpha arrays › HTH › HTH › winged helix domain › DUF7646 0.78 65.0 4.43e-01 88.6% 33.8%
4981948 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 74.0 6.83e-01 100.0% 95.3%
5003912 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 71.0 5.35e-01 100.0% 72.5%
4962051 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 71.0 5.62e-01 100.0% 62.2%
4973869 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.78 71.0 6.47e-01 98.6% 83.3%
4971999 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.77 71.0 5.78e-01 100.0% 73.6%
4947062 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.77 71.0 6.35e-01 100.0% 84.2%
4971711 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.77 71.0 5.76e-01 100.0% 73.6%
5026539 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.76 61.0 5.62e-01 85.7% 78.9%
5065308 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.75 67.0 5.63e-01 100.0% 79.2%
3963083 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 69.0 5.48e-01 100.0% 63.0%
5075560 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 69.0 5.22e-01 100.0% 65.2%
4997255 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 67.0 5.93e-01 100.0% 83.0%
None — 0.74 66.0 4.10e-01 97.1% 20.8%
4978826 873.1.1.18 ↗ a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HTH_24 0.73 66.0 4.56e-01 97.1% 34.2%
4948099 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 66.0 5.67e-01 100.0% 86.4%
4990676 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.73 66.0 5.63e-01 100.0% 85.5%
3933222 101.1.2.111 ↗ alpha arrays › HTH › HTH › winged helix domain › RQC 0.73 65.0 4.94e-01 97.1% 64.5%
4999601 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 66.0 5.75e-01 100.0% 89.5%
5050129 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.72 65.0 5.56e-01 100.0% 86.4%
3633871 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 65.0 4.58e-01 100.0% 45.9%
3655482 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.72 63.0 4.69e-01 100.0% 51.7%
4014683 101.1.2.24 ↗ alpha arrays › HTH › HTH › winged helix domain › MAGE 0.72 65.0 5.23e-01 100.0% 74.6%
3306699 101.1.2.517 ↗ alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD 0.72 66.0 4.03e-01 100.0% 79.4%
4947850 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.71 63.0 5.54e-01 100.0% 91.4%
3468223 101.1.2.90 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_9 0.71 65.0 4.07e-01 100.0% 36.8%
4443506 101.1.2.517 ↗ alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD 0.70 63.0 3.81e-01 95.7% 37.1%
4004118 375.1.1.179 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIE_alpha 0.70 64.0 4.64e-01 100.0% 87.6%
3945766 101.1.2.684 ↗ alpha arrays › HTH › HTH › winged helix domain › ORC-CDC6-like 0.69 58.0 4.70e-01 94.3% 63.7%
4232356 101.1.2.517 ↗ alpha arrays › HTH › HTH › winged helix domain › RNA_pol_Rpc82, HTH_9, POLR3C_WHD 0.69 64.0 3.72e-01 100.0% 82.8%
3586609 101.1.2.278 ↗ alpha arrays › HTH › HTH › winged helix domain › CNDH2_C 0.69 61.0 5.06e-01 97.1% 64.7%
4325040 101.1.2.101 ↗ alpha arrays › HTH › HTH › winged helix domain › Cdc6_C 0.69 60.0 4.94e-01 100.0% 74.6%
2609 101.1.2.38 ↗ alpha arrays › HTH › HTH › winged helix domain › RTP 0.67 60.0 5.00e-01 100.0% 72.5%
3434805 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.67 58.0 5.15e-01 100.0% 88.6%
3214070 101.1.2.149 ↗ alpha arrays › HTH › HTH › winged helix domain › Costars 0.66 59.0 4.60e-01 100.0% 57.3%
3187043 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 54.0 4.98e-01 90.0% 96.7%
5012702 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.64 55.0 4.74e-01 100.0% 77.4%
3986225 101.1.9.32 ↗ alpha arrays › HTH › HTH › Putative DNA-binding domain › ANT 0.62 50.0 3.58e-01 87.1% 39.0%
5057183 242.1.1.0 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.62 52.0 4.81e-01 98.6% 87.4%
5053317 213.1.1.25 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 0.61 51.0 3.88e-01 95.7% 39.4%
3602910 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.59 50.0 4.73e-01 100.0% 86.7%
5066425 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.58 40.0 3.89e-01 81.4% 63.7%
5022418 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.57 40.0 4.15e-01 82.9% 80.0%
4931923 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.57 39.0 3.82e-01 82.9% 63.7%
3602264 242.1.1.7 ↗ a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.57 48.0 4.55e-01 98.6% 87.1%
4678670 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.57 39.0 3.75e-01 84.3% 62.5%
5065444 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 40.0 3.56e-01 75.7% 52.4%
4044550 304.5.1.7 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like › DUF2179 0.55 38.0 3.68e-01 82.9% 63.7%
3673542 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.55 41.0 4.26e-01 84.3% 98.5%
3928429 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.54 42.0 3.14e-01 88.6% 32.5%
4009531 213.1.1.1 ↗ a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 0.53 42.0 3.37e-01 90.0% 43.9%
4547491 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.53 37.0 3.32e-01 75.7% 56.2%
2849954 320.2.1.1 ↗ a+b two layers › R3H domain-like › Ribosomal protein S8, N-terminal domain › Ribosomal protein S8, N-terminal domain › Ribosomal_S8 0.53 40.0 3.98e-01 88.6% 81.6%
3628199 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.52 39.0 3.51e-01 81.4% 66.0%
4963170 304.5.1.0 ↗ a+b two layers › Alpha-beta plaits › GlnB-like › GlnB-like 0.52 39.0 3.71e-01 85.7% 100.0%
3573665 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.52 37.0 3.54e-01 78.6% 83.3%
4383450 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.52 38.0 3.27e-01 78.6% 52.2%
4524153 304.22.1.1 ↗ a+b two layers › Alpha-beta plaits › Urease metallochaperone UreE, C-terminal domain › Urease metallochaperone UreE, C-terminal domain › UreE_C 0.52 35.0 3.41e-01 74.3% 60.0%
3727503 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.51 37.0 3.47e-01 80.0% 69.5%
3781954 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.51 37.0 3.38e-01 77.1% 61.1%
5033257 304.126.1.0 ↗ a+b two layers › Alpha-beta plaits › ferredoxin-like domain in vacuolar ATP synthase subunit C › ferredoxin-like domain in vacuolar ATP synthase subunit C 0.51 37.0 3.69e-01 81.4% 74.7%
4012898 320.1.1.0 ↗ a+b two layers › R3H domain-like › R3H domain › R3H domain 0.51 42.0 3.83e-01 98.6% 68.0%
3798409 327.11.2.0 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.51 35.0 3.40e-01 72.9% 73.8%
3212174 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.50 35.0 3.37e-01 74.3% 69.4%
4943823 304.162.1.0 ↗ a+b two layers › Alpha-beta plaits › Competence or damage-inducible protein CinA middle domain › Competence or damage-inducible protein CinA middle domain 0.50 38.0 3.70e-01 84.3% 75.0%
3407748 327.11.2.1 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_1 0.50 36.0 3.33e-01 78.6% 62.1%
D2 medium residues 311-355
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2gmsB01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.75 56.0 3.44e-01 82.2% 96.6%
4rxkA01 3.40.640.10 Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) 0.72 54.0 3.36e-01 82.2% 96.8%
2qqpD00 6.10.140.650 Special › Helix non-globular › Helix Hairpins › 0.67 45.0 4.66e-01 71.1% 82.5%
1ic8A02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 46.0 4.03e-01 80.0% 47.3%
8igrI01 2.40.270.10 Mainly Beta › Beta Barrel › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; Domain 6 › DNA-directed RNA polymerase, subunit 2, domain 6 0.64 47.0 3.23e-01 82.2% 25.6%
5l3wA01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.62 48.0 4.04e-01 88.9% 58.3%
1gjsA00 1.10.8.40 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Albumin-binding domain 0.62 44.0 3.97e-01 77.8% 58.5%
6wgyA02 1.10.230.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450-Terp; domain 2 › Cytochrome P450-Terp, domain 2 0.60 50.0 3.93e-01 97.8% 62.4%
4tkzA00 3.40.50.510 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Phosphotransferase system, mannose-type IIA component 0.58 41.0 3.12e-01 80.0% 47.7%
6jkvA00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.58 46.0 2.97e-01 91.1% 88.3%
3dugA02 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.58 40.0 2.50e-01 77.8% 86.3%
3ocpB00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.57 45.0 3.41e-01 93.3% 33.6%
6eudA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 40.0 2.73e-01 75.6% 31.2%
4lzgA01 1.10.150.110 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like 0.57 43.0 3.63e-01 95.6% 52.7%
3h1qA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.56 41.0 2.84e-01 77.8% 35.3%
2nq2D00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 45.0 2.94e-01 100.0% 38.7%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.52 38.0 3.13e-01 80.0% 46.7%
2kvsA00 1.10.150.260 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › YozE SAM-like 0.51 34.0 2.97e-01 71.1% 42.5%
1qs1A01 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.50 34.0 2.36e-01 75.6% 82.8%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4324088 103.1.1.6 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C 0.71 50.0 4.75e-01 80.0% 61.8%
3278617 5063.1.1.0 ↗ alpha bundles › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK › Photosystem I reaction center subunit X, PsaK 0.66 48.0 4.67e-01 82.2% 72.0%
3463068 216.1.1.17 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › Med15_C 0.62 48.0 3.48e-01 93.3% 76.1%
3298325 3846.1.1.0 ↗ alpha bundles › IcmR › IcmR › IcmR 0.58 40.0 4.02e-01 73.3% 100.0%
3693124 190.1.1.1 ↗ alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box 0.58 40.0 3.29e-01 73.3% 62.2%