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MT119766.1__QIN95335.1__PBR31_00024__00024
Bact-VirMT119766.1__QIN95335.1__PBR31_00024__00024
Identity
- Accession:
- MT119766 ↗
- Kingdom:
- phage
Quality
78.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-53
Domain cluster:
representative
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3gonA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.64 | 53.0 | 3.84e-01 | 91.8% | 94.8% |
| 1vk1A02 | 3.30.1760.10 | Alpha Beta › 2-Layer Sandwich › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, domain 2 › Conserved hypothetical protein from pyrococcus furiosus pfu- 392566-001, domain 2 | 0.58 | 44.0 | 3.46e-01 | 91.8% | 74.6% |
| 4hacA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.58 | 45.0 | 3.43e-01 | 89.8% | 100.0% |
| 1uekA02 | 3.30.70.890 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GHMP kinase, C-terminal domain | 0.56 | 44.0 | 3.36e-01 | 89.8% | 92.5% |
| 4ymxA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.56 | 43.0 | 3.70e-01 | 93.9% | 94.6% |
| 2dmkA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 46.0 | 3.74e-01 | 100.0% | 63.1% |
| 2r9qA02 | 2.70.40.10 | Mainly Beta › Distorted Sandwich › Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A › Deoxyuridine triphosphatase (dUTPase) | 0.55 | 41.0 | 3.06e-01 | 91.8% | 58.3% |
| 4bs9A01 | 3.90.930.60 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.54 | 38.0 | 3.22e-01 | 79.6% | 94.7% |
| 2jgbA01 | 3.30.760.10 | Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e | 0.53 | 42.0 | 3.11e-01 | 100.0% | 65.9% |
| 7wezA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 41.0 | 3.63e-01 | 87.8% | 100.0% |
| 5e5nA02 | 1.10.1240.100 | Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › | 0.53 | 40.0 | 3.38e-01 | 89.8% | 75.5% |
| 3aqoA01 | 3.30.70.3400 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.53 | 42.0 | 3.64e-01 | 91.8% | 96.2% |
| 3qa8A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 35.0 | 3.06e-01 | 73.5% | 59.0% |
| 4r2fA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 40.0 | 2.83e-01 | 98.0% | 70.9% |
| 4r6yA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 40.0 | 2.98e-01 | 95.9% | 84.1% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.51 | 39.0 | 2.68e-01 | 83.7% | 91.0% |
| 5lomA02 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 39.0 | 3.39e-01 | 93.9% | 94.5% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4997453 | 2002.1.1.172 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C | 0.62 | 43.0 | 2.84e-01 | 73.5% | 33.0% |
| 5076565 | 2002.1.1.172 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C | 0.59 | 41.0 | 2.71e-01 | 73.5% | 31.7% |
| 4964100 | 2002.1.1.172 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C | 0.58 | 39.0 | 2.64e-01 | 73.5% | 16.0% |
| 4996145 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.56 | 46.0 | 3.56e-01 | 95.9% | 43.3% |
| 3421616 | 5.1.4.14 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Peptidase_S9_N | 0.56 | 39.0 | 2.42e-01 | 79.6% | 20.0% |
| 5071420 | 268.1.1.0 ↗ | a+b two layers › Sterol carrier protein-like › Sterol carrier protein, SCP-related › Sterol carrier protein, SCP-related | 0.55 | 46.0 | 3.59e-01 | 98.0% | 46.1% |
| 5075741 | 2002.1.1.102 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP | 0.53 | 41.0 | 2.76e-01 | 87.8% | 33.3% |
| 4059719 | 304.9.1.61 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › Thc1_RRM | 0.53 | 42.0 | 3.78e-01 | 93.9% | 88.0% |
| 3604850 | 868.1.1.9 ↗ | a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › RESC1_2 | 0.52 | 41.0 | 2.58e-01 | 93.9% | 35.8% |
| 3467232 | 4076.1.1.0 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like | 0.51 | 40.0 | 3.69e-01 | 91.8% | 82.9% |
| 3465504 | 4076.1.1.0 ↗ | a+b two layers › L9 N-domain-like › L9 N-domain-like › L9 N-domain-like | 0.51 | 37.0 | 3.78e-01 | 83.7% | 96.0% |
| 5033296 | 2002.1.1.172 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP_C | 0.50 | 41.0 | 2.83e-01 | 98.0% | 90.0% |