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MT119766.1__QIN95360.1__PBR31_00049__00049
Bact-VirMT119766.1__QIN95360.1__PBR31_00049__00049
Identity
- Accession:
- MT119766 ↗
- Kingdom:
- phage
Quality
79.9
mean pLDDT
Cluster
View cluster (10 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-53_69-90
Domain cluster:
rep: MG592478.1__AUR87931.1__NVP1106O_08__00008__D1-87
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3layF00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.88 | 42.0 | 4.20e-01 | 98.7% | 46.2% |
| 4gysA02 | 1.20.58.1700 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.78 | 32.0 | 3.29e-01 | 92.0% | 39.7% |
| 4qgpB00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.68 | 35.0 | 3.05e-01 | 90.7% | 34.6% |
| 2p5tA00 | 1.10.8.130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.67 | 60.0 | 5.58e-01 | 98.7% | 96.7% |
| 2a7oA00 | 1.10.1740.100 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › Set2, Rpb1 interacting domain | 0.64 | 52.0 | 4.74e-01 | 88.0% | 84.0% |
| 3ckdA02 | 1.20.58.360 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Shigella T3SS effector IpaH defines | 0.64 | 44.0 | 3.73e-01 | 72.0% | 65.3% |
| 3vbbE01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.63 | 43.0 | 3.71e-01 | 100.0% | 44.5% |
| 2oexA01 | 1.20.120.560 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › alix/aip1 in complex with the ypdl late domain | 0.60 | 52.0 | 4.29e-01 | 100.0% | 92.3% |
| 1h7cA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 44.0 | 3.93e-01 | 77.3% | 100.0% |
| 2xubA05 | 6.10.140.1450 | Special › Helix non-globular › Helix Hairpins › | 0.60 | 41.0 | 3.77e-01 | 70.7% | 78.1% |
| 2jhnA03 | 1.10.1670.10 | Mainly Alpha › Orthogonal Bundle › Endonuclease Iii, domain 2 › Helix-hairpin-Helix base-excision DNA repair enzymes (C-terminal) | 0.59 | 42.0 | 4.64e-01 | 82.7% | 95.0% |
| 4xvxA03 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.58 | 51.0 | 4.15e-01 | 100.0% | 72.8% |
| 6grjB01 | 1.20.1170.10 | Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; › | 0.58 | 44.0 | 2.88e-01 | 80.0% | 71.2% |
| 2yk0A03 | 1.20.58.1930 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 40.0 | 2.85e-01 | 70.7% | 66.1% |
| 1aepA00 | 1.20.120.20 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Apolipoprotein | 0.57 | 50.0 | 4.01e-01 | 98.7% | 64.1% |
| 7e84A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.57 | 47.0 | 3.95e-01 | 100.0% | 54.5% |
| 3er9B01 | 1.20.1270.320 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Poxvirus poly(A) polymerase, N domain | 0.55 | 47.0 | 4.27e-01 | 98.7% | 100.0% |
| 1b5lA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.55 | 47.0 | 3.76e-01 | 94.7% | 53.3% |
| 1l8qA03 | 1.10.1750.10 | Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain | 0.55 | 42.0 | 3.71e-01 | 81.3% | 99.1% |
| 3m0fB02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.55 | 45.0 | 3.92e-01 | 93.3% | 73.2% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 40.0 | 3.91e-01 | 80.0% | 70.7% |
| 6qumQ00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.54 | 40.0 | 4.04e-01 | 84.0% | 79.7% |
| 4dxwA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.53 | 44.0 | 3.93e-01 | 100.0% | 62.5% |
| 1nhyA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.53 | 44.0 | 3.64e-01 | 93.3% | 92.1% |
| 1a00B00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.52 | 39.0 | 3.18e-01 | 78.7% | 66.4% |
| 3egoA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.52 | 42.0 | 3.64e-01 | 90.7% | 99.2% |
| 2qffA00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.50 | 41.0 | 4.21e-01 | 92.0% | 100.0% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3398929 | 5041.1.1.32 ↗ | extended segments › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › F1F0 ATP synthase subunit C › TMEM141 | 0.75 | 51.0 | 4.83e-01 | 70.7% | 58.9% |
| 5062016 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.62 | 43.0 | 3.89e-01 | 70.7% | 54.0% |
| 4601944 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.62 | 42.0 | 4.27e-01 | 70.7% | 77.3% |
| 3688934 | 603.2.1.23 ↗ | alpha bundles › STAT-like › STAT › STAT › DUF7607 | 0.60 | 40.0 | 3.56e-01 | 70.7% | 47.3% |
| 3596560 | 3291.1.1.0 ↗ | alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related | 0.60 | 42.0 | 3.70e-01 | 76.0% | 55.5% |
| 3197604 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.59 | 47.0 | 3.75e-01 | 86.7% | 75.2% |
| 3206640 | 103.4.1.13 ↗ | alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › PF28365 | 0.58 | 45.0 | 4.20e-01 | 88.0% | 78.0% |
| 3578804 | 5050.1.1.6 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › OATP | 0.58 | 50.0 | 3.49e-01 | 100.0% | 73.7% |
| 3593055 | 3542.1.1.0 ↗ | alpha arrays › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases › Presenilin family intramembrane aspartate proteases | 0.58 | 50.0 | 3.48e-01 | 94.7% | 60.0% |
| 1407835 | 4339.1.1.1 ↗ | alpha arrays › N-terminal helical domain in Poxvirus poly(A) polymerase catalytic subunit › N-terminal helical domain in Poxvirus poly(A) polymerase catalytic subunit › N-terminal helical domain in Poxvirus poly(A) polymerase catalytic subunit › Pox_polyA_pol_N | 0.58 | 47.0 | 4.29e-01 | 94.7% | 98.2% |
| 3475373 | 1128.1.1.2 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR_2 | 0.58 | 49.0 | 4.93e-01 | 96.0% | 100.0% |
| 3643902 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.57 | 46.0 | 3.94e-01 | 90.7% | 83.8% |
| 5058416 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.57 | 48.0 | 3.58e-01 | 92.0% | 46.3% |
| 4361794 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.56 | 46.0 | 3.32e-01 | 100.0% | 31.2% |
| 3193157 | 3361.1.1.1 ↗ | alpha bundles › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 › RAC_head | 0.55 | 43.0 | 4.02e-01 | 84.0% | 72.3% |
| 4094218 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.55 | 46.0 | 4.05e-01 | 92.0% | 85.5% |
| 3737296 | 192.2.1.18 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ING | 0.54 | 40.0 | 3.30e-01 | 78.7% | 67.7% |
| 3257419 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.53 | 47.0 | 4.05e-01 | 98.7% | 71.7% |