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MT135024.1__QIW90324.1__OLCHANIL_00241__00214
Bact-VirMT135024.1__QIW90324.1__OLCHANIL_00241__00214
Identity
- Accession:
- MT135024 ↗
- Kingdom:
- phage
Quality
67.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Schizotequatrovirus›
Vibrio_phage_V05
TaxID: 2724325
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 20-57_241-309
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ghgB02 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.68 | 62.0 | 4.63e-01 | 100.0% | 61.5% |
| 3ir9A02 | 3.30.1330.30 | Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › Ribosomal protein L30/S12 | 0.68 | 32.0 | 3.08e-01 | 92.5% | 39.2% |
| 1m1jE01 | 3.90.215.10 | Alpha Beta › Alpha-Beta Complex › Gamma Fibrinogen; Chain A, domain 1 › Gamma Fibrinogen, chain A, domain 1 | 0.61 | 36.0 | 3.16e-01 | 100.0% | 39.2% |
| 3bb7A01 | 3.90.70.50 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) | 0.55 | 37.0 | 3.20e-01 | 100.0% | 41.4% |
| 1qexA03 | 2.60.40.1680 | Mainly Beta › Sandwich › Immunoglobulin-like › 4-oxalocrotonate tautomerase-like | 0.54 | 43.0 | 4.21e-01 | 100.0% | 77.2% |
| 1neiA00 | 3.30.160.220 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › YoaG | 0.53 | 30.0 | 3.86e-01 | 84.1% | 98.3% |
| 2hrvA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.50 | 31.0 | 3.24e-01 | 98.1% | 67.4% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3934671 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.60 | 37.0 | 4.11e-01 | 100.0% | 77.6% |
| 3939093 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.60 | 36.0 | 4.15e-01 | 100.0% | 85.3% |
| 3372243 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 33.0 | 3.66e-01 | 100.0% | 73.8% |
| 3390155 | 1.1.8.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C | 0.55 | 33.0 | 3.61e-01 | 100.0% | 72.9% |
| 3575737 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 35.0 | 3.76e-01 | 100.0% | 80.0% |
| 3492016 | 4.1.1.43 ↗ | beta barrels › SH3 › SH3 › SH3 › SMN_Tudor | 0.52 | 29.0 | 3.13e-01 | 100.0% | 62.2% |
| 137238 | 75.1.1.6 ↗ | beta barrels › Cyclophilin-like › Cyclophilin-like › Cyclophilin-like › DUF3830 | 0.51 | 43.0 | 3.74e-01 | 90.7% | 98.7% |
| 4099267 | 1.1.8.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › GTP-eEF1A_C | 0.50 | 35.0 | 3.31e-01 | 100.0% | 57.8% |
| 3478706 | 220.1.1.8 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM | 0.50 | 36.0 | 3.25e-01 | 91.6% | 53.3% |
D2
high
residues 70-225
Domain cluster:
rep: rifoxyc1_full_scaffold_3_prodigal-single.1__X__X__00157__D2-120
D3
high
residues 335-485
Domain cluster:
rep: NC_018087.3__YP_006489032.1__ZZ1p0245__00245__D24-178
D4
high
residues 576-623
D5
medium
residues 490-551