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MT135024.1__QIW90341.1__OLCHANIL_00261__00231
Bact-VirMT135024.1__QIW90341.1__OLCHANIL_00261__00231
Identity
- Accession:
- MT135024 ↗
- Kingdom:
- phage
Quality
86.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Schizotequatrovirus›
Vibrio_phage_V05
TaxID: 2724325
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-136
Domain cluster:
rep: NC_007021.1__YP_238596.1__TwortORF045__00062__D44-158
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wghA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.79 | 71.0 | 4.42e-01 | 94.1% | 20.5% |
| 1lvfB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.66 | 26.0 | 2.94e-01 | 73.5% | 46.2% |
| 8gccA03 | 1.10.268.10 | Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 | 0.61 | 30.0 | 3.40e-01 | 89.7% | 61.5% |
| 1wh4A01 | 1.10.533.10 | Mainly Alpha › Orthogonal Bundle › Death Domain, Fas › Death Domain, Fas | 0.52 | 27.0 | 3.12e-01 | 91.2% | 68.1% |
| 2ziuA02 | 1.10.150.670 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Crossover junction endonuclease EME1, DNA-binding domain | 0.50 | 27.0 | 3.30e-01 | 79.4% | 83.1% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3948801 | 1074.1.1.1 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN | 0.89 | 67.0 | 6.98e-01 | 77.2% | 96.8% |
| 3594035 | 1074.1.1.0 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases | 0.85 | 65.0 | 6.65e-01 | 78.7% | 94.6% |
| 3966685 | 1074.1.1.1 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN | 0.84 | 64.0 | 6.80e-01 | 78.7% | 92.5% |
| 3975063 | 1074.1.1.2 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN,RNR_N | 0.82 | 77.0 | 7.09e-01 | 100.0% | 82.9% |
| 3607359 | 103.2.1.1 ↗ | alpha arrays › RuvA-C › ATP cone › ATP cone › Ribonuc_red_lgN | 0.81 | 76.0 | 6.53e-01 | 100.0% | 89.8% |
| 4990405 | 1074.1.1.1 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN | 0.81 | 59.0 | 6.52e-01 | 76.5% | 92.7% |
| 3519243 | 1074.1.1.0 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases | 0.81 | 76.0 | 6.53e-01 | 99.3% | 91.0% |
| 2325410 | 1074.1.1.2 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN,RNR_N | 0.81 | 75.0 | 7.10e-01 | 100.0% | 87.0% |
| 3277072 | 1074.1.1.1 ↗ | alpha arrays › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Alpha helical domain of ribonucleotide reductases › Ribonuc_red_lgN | 0.80 | 75.0 | 7.16e-01 | 100.0% | 91.0% |
| 4968178 | 5051.1.1.0 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like | 0.55 | 38.0 | 2.77e-01 | 72.1% | 65.1% |
| 3232390 | 633.1.1.1 ↗ | alpha bundles › Bromodomain-like › Bromodomain › Bromodomain › Bromodomain | 0.53 | 31.0 | 3.19e-01 | 74.3% | 57.8% |
D2
medium
residues 144-217
Domain cluster:
rep: MW074125.1__QXO06237.1__X__00148__D220-303
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02867.21 best | Ribonuc_red_lgC | 37.6 | 1.50e-09 | 100.0% | 13.7% |
CATH (42)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1peqA02 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.92 | 85.0 | 5.03e-01 | 97.3% | 15.3% |
| 1l1lA02 | 3.30.1620.10 | Alpha Beta › 2-Layer Sandwich › b-12 dependent (class ii) ribonucleotide reductase, Chain A, Domain 2 › b-12 dependent (class ii) ribonucleotide reductase, Chain A, Domain 2 | 0.82 | 73.0 | 6.27e-01 | 95.9% | 70.5% |
| 1ep3B02 | 3.40.50.80 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module | 0.79 | 55.0 | 4.69e-01 | 90.5% | 46.2% |
| 1a9xA08 | 3.40.50.1380 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Methylglyoxal synthase-like domain | 0.74 | 46.0 | 4.02e-01 | 89.2% | 43.4% |
| 1ydgA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.67 | 52.0 | 3.82e-01 | 83.8% | 31.8% |
| 3pnxA00 | 3.40.1260.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like | 0.65 | 55.0 | 4.24e-01 | 91.9% | 70.6% |
| 1eucA02 | 3.40.50.261 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Succinyl-CoA synthetase domains | 0.63 | 51.0 | 3.97e-01 | 90.5% | 44.1% |
| 4n0rA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.63 | 51.0 | 3.42e-01 | 90.5% | 34.8% |
| 6se1A01 | 3.40.50.1110 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase | 0.63 | 52.0 | 3.60e-01 | 90.5% | 43.6% |
| 2yutA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.63 | 55.0 | 4.05e-01 | 100.0% | 43.8% |
| 2i0fA00 | 3.40.50.960 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Lumazine/riboflavin synthase | 0.63 | 54.0 | 4.38e-01 | 98.6% | 98.6% |
| 2qs7A00 | 3.40.1260.10 | Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like | 0.62 | 54.0 | 4.41e-01 | 95.9% | 67.4% |
| 3aimA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.62 | 50.0 | 3.37e-01 | 89.2% | 45.9% |
| 3bmxA02 | 3.40.50.1700 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycoside hydrolase family 3 C-terminal domain | 0.60 | 50.0 | 3.53e-01 | 90.5% | 30.9% |
| 4impA02 | 3.40.50.11460 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.60 | 48.0 | 3.56e-01 | 90.5% | 40.3% |
| 1akqA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.59 | 48.0 | 3.92e-01 | 95.9% | 46.3% |
| 1g7uA00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.58 | 49.0 | 3.36e-01 | 95.9% | 97.5% |
| 3qh4A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.58 | 46.0 | 3.07e-01 | 89.2% | 38.2% |
| 1d4aA00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.57 | 48.0 | 3.32e-01 | 95.9% | 32.6% |
| 1ycdB00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 43.0 | 3.11e-01 | 85.1% | 43.7% |
| 4q05A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.55 | 44.0 | 2.96e-01 | 90.5% | 38.2% |
| 3uugA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 50.0 | 3.94e-01 | 100.0% | 54.7% |
| 3mgkB00 | 3.40.50.880 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Class I glutamine amidotransferase (GATase) domain | 0.55 | 37.0 | 2.76e-01 | 81.1% | 25.9% |
| 4ry9A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.55 | 48.0 | 3.91e-01 | 95.9% | 60.0% |
| 1ns5B00 | 3.40.1280.10 | Alpha Beta › 3-Layer(aba) Sandwich › Alpha/beta knot › SPOUT methyltransferase, trefoil knot domain | 0.55 | 44.0 | 3.56e-01 | 90.5% | 53.9% |
| 1efaA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 48.0 | 4.06e-01 | 100.0% | 91.3% |
| 2vk2A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 49.0 | 4.05e-01 | 100.0% | 63.4% |
| 4rsmD01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 49.0 | 3.75e-01 | 100.0% | 49.1% |
| 3rotA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 48.0 | 3.95e-01 | 100.0% | 61.5% |
| 1tllA01 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.53 | 44.0 | 3.47e-01 | 95.9% | 47.7% |
| 3h5lA02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 47.0 | 3.66e-01 | 100.0% | 86.7% |
| 5f7vA00 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.53 | 40.0 | 2.64e-01 | 85.1% | 58.5% |
| 2amjB00 | 3.40.50.360 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain | 0.53 | 42.0 | 3.36e-01 | 95.9% | 54.9% |
| 2c2xA02 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.53 | 45.0 | 3.65e-01 | 100.0% | 83.8% |
| 2hu8A02 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.53 | 45.0 | 3.19e-01 | 100.0% | 88.5% |
| 3jy6A01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 46.0 | 3.80e-01 | 95.9% | 62.0% |
| 3ksmA01 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 46.0 | 3.88e-01 | 100.0% | 67.5% |
| 4jwoA01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.52 | 42.0 | 3.41e-01 | 89.2% | 98.6% |
| 3hebA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.52 | 41.0 | 3.44e-01 | 91.9% | 100.0% |
| 6ecpB01 | 3.40.50.10860 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 | 0.51 | 43.0 | 3.61e-01 | 100.0% | 81.4% |
| 1sw2A01 | 3.40.190.10 | Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II | 0.51 | 44.0 | 3.38e-01 | 93.2% | 100.0% |
| 3u80A00 | 3.40.50.9100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Dehydroquinase, class II | 0.51 | 42.0 | 3.59e-01 | 95.9% | 66.9% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3963206 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.97 | 93.0 | 5.38e-01 | 100.0% | 14.1% |
| 3942765 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.97 | 93.0 | 5.38e-01 | 100.0% | 14.3% |
| 4564490 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.90 | 85.0 | 4.91e-01 | 100.0% | 13.6% |
| 5030208 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.90 | 84.0 | 4.81e-01 | 100.0% | 12.4% |
| 4405836 | 7514.1.1.0 ↗ | a/b three-layered sandwiches › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain › Ferredoxin reductase-like, C-terminal NADP-linked domain | 0.77 | 52.0 | 4.38e-01 | 89.2% | 41.6% |
| 3601950 | 7516.1.1.0 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases | 0.76 | 55.0 | 4.09e-01 | 91.9% | 31.1% |
| 3601586 | 7516.1.1.40 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Stealth_CR2 | 0.75 | 54.0 | 3.47e-01 | 91.9% | 16.5% |
| 3654644 | 7512.1.1.0 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase | 0.70 | 52.0 | 3.59e-01 | 95.9% | 23.1% |
| 3624784 | 7579.1.1.70 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF1057 | 0.70 | 54.0 | 3.54e-01 | 98.6% | 18.8% |
| 3227846 | 7579.1.1.70 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DUF1057 | 0.69 | 56.0 | 3.64e-01 | 95.9% | 19.7% |
| None | — | 0.69 | 51.0 | 3.33e-01 | 90.5% | 17.9% | |
| 3950238 | 7567.1.1.1 ↗ | a/b three-layered sandwiches › LmbE-like › LmbE-like › LmbE-like › PIG-L | 0.68 | 57.0 | 3.76e-01 | 93.2% | 76.7% |
| 4987828 | 2002.3.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › Glycoside hydrolase/deacetylase › Glycoside hydrolase/deacetylase | 0.64 | 53.0 | 3.45e-01 | 90.5% | 23.5% |
| 4992249 | 7545.1.1.1 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DsrE | 0.63 | 53.0 | 4.37e-01 | 90.5% | 67.4% |
| 4981535 | 2007.2.1.6 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › Flavoproteins › Flavodoxin_5 | 0.63 | 48.0 | 3.94e-01 | 100.0% | 43.1% |
| 5011787 | 7545.1.1.1 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DsrE | 0.63 | 56.0 | 4.61e-01 | 94.6% | 64.0% |
| None | — | 0.63 | 48.0 | 3.49e-01 | 85.1% | 33.0% | |
| 5053872 | 2006.1.2.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › DHH phosphoesterases | 0.63 | 53.0 | 3.59e-01 | 91.9% | 70.0% |
| 4945217 | 7545.1.1.3 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DrsE_2 | 0.62 | 54.0 | 4.42e-01 | 94.6% | 65.9% |
| 4948235 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 51.0 | 3.75e-01 | 95.9% | 45.8% |
| 4982634 | 7545.1.1.0 ↗ | a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like | 0.62 | 54.0 | 4.40e-01 | 95.9% | 65.9% |
| 3260693 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.61 | 50.0 | 3.83e-01 | 90.5% | 40.0% |
| 3486073 | 2004.1.1.175 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA | 0.61 | 49.0 | 3.59e-01 | 90.5% | 37.6% |
| 3320834 | 2005.1.1.41 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_C | 0.60 | 49.0 | 3.96e-01 | 95.9% | 43.9% |
| 3331748 | 2003.1.5.31 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › GRAS | 0.60 | 52.0 | 3.28e-01 | 100.0% | 44.9% |
| None | — | 0.60 | 46.0 | 3.07e-01 | 85.1% | 41.9% | |
| 3490807 | 2.1.1.18 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › TRAM | 0.59 | 52.0 | 4.05e-01 | 100.0% | 65.1% |
| 3952594 | 7579.1.1.36 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 | 0.59 | 47.0 | 3.18e-01 | 89.2% | 41.7% |
| 3941555 | 7579.1.1.36 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 | 0.59 | 47.0 | 3.15e-01 | 89.2% | 43.3% |
| 3956862 | 7579.1.1.36 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_3 | 0.58 | 47.0 | 3.14e-01 | 89.2% | 41.2% |
| 4139792 | 2007.1.3.40 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › Exonuc_VII_L | 0.58 | 49.0 | 3.83e-01 | 95.9% | 53.5% |
| 3959101 | 2005.1.1.3 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp | 0.57 | 48.0 | 3.98e-01 | 94.6% | 54.1% |
| 4577399 | 2007.1.13.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Lumazine synthase › DMRL_synthase | 0.57 | 48.0 | 3.83e-01 | 100.0% | 86.1% |
| 2858023 | 2004.1.1.177 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › CENP-M | 0.57 | 49.0 | 3.79e-01 | 100.0% | 57.4% |
| 4166467 | 2007.1.13.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Lumazine synthase › DMRL_synthase | 0.56 | 47.0 | 3.94e-01 | 100.0% | 99.3% |
| 4653607 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.55 | 43.0 | 3.23e-01 | 100.0% | 32.8% |
| 4518009 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.55 | 45.0 | 3.67e-01 | 93.2% | 98.7% |
| 4118994 | 2007.1.7.2 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › DHQ_synthase | 0.54 | 43.0 | 3.35e-01 | 90.5% | 37.7% |
| 3684934 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 48.0 | 3.45e-01 | 100.0% | 51.4% |
| 3224227 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.53 | 46.0 | 3.21e-01 | 100.0% | 60.4% |
| 4385639 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.53 | 44.0 | 3.50e-01 | 93.2% | 94.9% |
| 5018922 | 7579.1.1.13 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › DLH | 0.53 | 42.0 | 3.05e-01 | 90.5% | 37.4% |
| 3188709 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.53 | 44.0 | 3.49e-01 | 94.6% | 56.9% |
| 4977268 | 7504.1.1.2 ↗ | a/b three-layered sandwiches › ITPase-like › ITPase-like › ITPase-like › NTPase_I-T | 0.53 | 43.0 | 3.25e-01 | 93.2% | 38.5% |
| 3970853 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.53 | 45.0 | 3.37e-01 | 91.9% | 92.6% |
| 4100212 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.53 | 44.0 | 3.52e-01 | 94.6% | 97.4% |
| 4488757 | 7522.1.1.1 ↗ | a/b three-layered sandwiches › TK C-terminal domain-like › TK C-terminal domain-like › TK C-terminal domain-like › Transketolase_C | 0.52 | 46.0 | 3.76e-01 | 100.0% | 58.6% |
| 4168893 | 2488.1.1.5 ↗ | a/b three-layered sandwiches › alpha/beta knot › alpha/beta knot › alpha/beta knot › SPOUT_MTase | 0.52 | 42.0 | 3.43e-01 | 90.5% | 56.7% |
| 4611335 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.52 | 44.0 | 2.89e-01 | 100.0% | 20.8% |
| 4667158 | 2007.1.2.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_4 | 0.52 | 43.0 | 3.55e-01 | 95.9% | 57.9% |
| 4396999 | 2003.1.1.120 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD-bd_HRPKS_sdrA | 0.52 | 41.0 | 2.92e-01 | 86.5% | 35.1% |
| 3592241 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.52 | 46.0 | 3.56e-01 | 100.0% | 65.5% |
| 4318837 | 2007.1.2.8 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ABC_sub_bind | 0.51 | 41.0 | 3.32e-01 | 95.9% | 44.8% |
| 4002418 | 7538.1.1.1 ↗ | a/b three-layered sandwiches › Hypothetical protein MT938 (MTH938) › Hypothetical protein MT938 (MTH938) › Hypothetical protein MT938 (MTH938) › DUF498 | 0.51 | 37.0 | 3.08e-01 | 79.7% | 46.9% |
| 5020942 | 7503.1.1.0 ↗ | a/b three-layered sandwiches › TolB, N-terminal domain › TolB, N-terminal domain › TolB, N-terminal domain | 0.51 | 39.0 | 3.02e-01 | 83.8% | 99.4% |
| 3945628 | 7523.1.1.0 ↗ | a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II | 0.50 | 39.0 | 3.08e-01 | 91.9% | 91.1% |
D3
medium
residues 218-333
Domain cluster:
rep: ribonucleotide-diphosphate_reductase_large_chain__YP_009119180__Pandoravirus_inopinatum__1605721__D783-936
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02867.21 best | Ribonuc_red_lgC | 35.5 | 6.40e-09 | 91.4% | 22.1% |
CATH (31)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1r1rA02 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.87 | 84.0 | 5.25e-01 | 100.0% | 28.0% |
| 2wghA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.86 | 82.0 | 4.96e-01 | 100.0% | 21.3% |
| 1xjkA00 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.78 | 74.0 | 4.52e-01 | 100.0% | 18.6% |
| 2yk4A01 | 3.30.370.20 | Alpha Beta › 2-Layer Sandwich › Barnase; Chain D › | 0.68 | 39.0 | 4.55e-01 | 94.8% | 80.5% |
| 3t5tA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.63 | 48.0 | 4.07e-01 | 99.1% | 49.5% |
| 1vjtA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.61 | 41.0 | 4.14e-01 | 99.1% | 68.1% |
| 4p0tB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 44.0 | 4.04e-01 | 100.0% | 58.0% |
| 1z2aA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.59 | 41.0 | 3.69e-01 | 100.0% | 50.6% |
| 7l9pE01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.56 | 43.0 | 3.59e-01 | 81.9% | 46.2% |
| 6tdxG01 | 3.40.1380.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate Kinase; Chain: A, domain 1 › ATP synthase, F1 complex, gamma subunit | 0.55 | 38.0 | 3.12e-01 | 100.0% | 38.8% |
| 1fxkB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.54 | 31.0 | 3.20e-01 | 75.9% | 56.9% |
| 4f6cB00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.54 | 48.0 | 3.41e-01 | 100.0% | 64.9% |
| 3oy2A02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.54 | 41.0 | 3.28e-01 | 99.1% | 40.1% |
| 1oaaA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.53 | 48.0 | 3.73e-01 | 100.0% | 60.6% |
| 2d1fA01 | 3.40.50.1100 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 48.0 | 3.73e-01 | 99.1% | 51.0% |
| 2cvbA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 39.0 | 3.39e-01 | 99.1% | 48.7% |
| 3nv7A00 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 37.0 | 3.41e-01 | 96.6% | 54.8% |
| 2qhaA00 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 46.0 | 3.39e-01 | 100.0% | 79.2% |
| 4fleA00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.52 | 45.0 | 3.89e-01 | 98.3% | 93.8% |
| 6ncrB01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 46.0 | 3.71e-01 | 100.0% | 87.1% |
| 3g8rA01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 46.0 | 3.59e-01 | 100.0% | 85.5% |
| 5lqdA02 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.51 | 45.0 | 3.77e-01 | 98.3% | 60.4% |
| 4rckA00 | 3.40.50.410 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain | 0.51 | 39.0 | 3.33e-01 | 100.0% | 47.1% |
| 1dhrA00 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 46.0 | 3.67e-01 | 100.0% | 58.1% |
| 2zdiB00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 30.0 | 3.12e-01 | 75.9% | 61.3% |
| 3wgtA01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.51 | 45.0 | 3.78e-01 | 97.4% | 62.6% |
| 3nlcA02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.51 | 43.0 | 3.50e-01 | 97.4% | 91.4% |
| 3aeiA00 | 1.10.287.370 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.51 | 30.0 | 3.34e-01 | 75.0% | 73.4% |
| 1ur3M00 | 3.20.20.100 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › NADP-dependent oxidoreductase domain | 0.50 | 44.0 | 3.30e-01 | 97.4% | 85.9% |
| 3fkfD00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.50 | 38.0 | 3.61e-01 | 100.0% | 67.9% |
| 1rp0A02 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.50 | 43.0 | 3.52e-01 | 98.3% | 86.4% |
ECOD (57)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3963206 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.87 | 84.0 | 5.21e-01 | 100.0% | 26.3% |
| 4145444 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.87 | 84.0 | 5.24e-01 | 100.0% | 27.0% |
| 3942765 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.87 | 84.0 | 5.23e-01 | 100.0% | 26.8% |
| 4015532 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.87 | 83.0 | 5.10e-01 | 100.0% | 23.8% |
| 3590466 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.86 | 83.0 | 5.14e-01 | 100.0% | 25.3% |
| 3958480 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.86 | 83.0 | 5.58e-01 | 100.0% | 37.3% |
| 3823652 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.86 | 83.0 | 5.10e-01 | 100.0% | 24.2% |
| 3500621 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.86 | 82.0 | 5.14e-01 | 100.0% | 27.9% |
| 4067125 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.86 | 82.0 | 5.15e-01 | 100.0% | 28.6% |
| 4298539 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.85 | 82.0 | 5.09e-01 | 100.0% | 26.5% |
| 996122 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.85 | 81.0 | 5.00e-01 | 100.0% | 23.4% |
| 4985374 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.85 | 78.0 | 4.78e-01 | 100.0% | 19.3% |
| 4934525 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.83 | 76.0 | 4.76e-01 | 100.0% | 20.6% |
| 5040104 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.83 | 77.0 | 4.88e-01 | 100.0% | 22.4% |
| 5030208 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.82 | 78.0 | 4.79e-01 | 100.0% | 22.0% |
| 4190659 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.82 | 78.0 | 4.69e-01 | 100.0% | 19.1% |
| 4963031 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.82 | 78.0 | 4.77e-01 | 100.0% | 30.6% |
| 5058546 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.82 | 78.0 | 4.76e-01 | 100.0% | 22.1% |
| 2504767 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.82 | 78.0 | 4.92e-01 | 100.0% | 26.6% |
| 4564490 | 2500.1.1.2 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC | 0.82 | 78.0 | 4.82e-01 | 100.0% | 20.7% |
| 4993733 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.79 | 75.0 | 4.66e-01 | 100.0% | 68.9% |
| 4994375 | 2500.1.1.0 ↗ | a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel | 0.76 | 72.0 | 4.59e-01 | 100.0% | 84.0% |
| 3956943 | 2008.1.1.7 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › ERCC4 | 0.65 | 47.0 | 4.36e-01 | 100.0% | 59.3% |
| 3973173 | 7512.1.1.3 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 | 0.61 | 46.0 | 3.97e-01 | 100.0% | 49.5% |
| 4939656 | 2008.1.1.102 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF1829 | 0.58 | 38.0 | 3.78e-01 | 86.2% | 62.4% |
| 3594965 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.57 | 32.0 | 3.04e-01 | 75.0% | 45.0% |
| 1878821 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.56 | 40.0 | 3.93e-01 | 100.0% | 66.9% |
| 3272720 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.55 | 45.0 | 4.68e-01 | 89.7% | 99.1% |
| 4025136 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.55 | 47.0 | 3.46e-01 | 93.1% | 77.8% |
| 4083451 | 192.2.1.20 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › ASNSD1-SEP | 0.55 | 31.0 | 3.60e-01 | 75.0% | 78.8% |
| 4936471 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.55 | 47.0 | 3.93e-01 | 94.0% | 66.5% |
| 3808578 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.54 | 30.0 | 3.57e-01 | 75.0% | 82.4% |
| 3967540 | 7579.1.1.29 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › UPF0227 | 0.54 | 47.0 | 4.01e-01 | 98.3% | 92.8% |
| 3257763 | 2003.1.2.18 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.54 | 46.0 | 3.27e-01 | 97.4% | 92.7% |
| 3705512 | 7533.1.1.1 ↗ | a/b three-layered sandwiches › Phosphoglycerate kinase domain 2 › Phosphoglycerate kinase domain 2 › Phosphoglycerate kinase domain 2 › PGK | 0.53 | 47.0 | 3.78e-01 | 99.1% | 72.5% |
| 3924464 | 2004.1.1.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA | 0.53 | 41.0 | 3.85e-01 | 84.5% | 65.3% |
| 3184194 | 2484.1.1.48 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › MutS_II | 0.53 | 45.0 | 3.81e-01 | 92.2% | 86.3% |
| 3309530 | 2005.1.1.43 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CHX17_2nd | 0.53 | 48.0 | 4.09e-01 | 100.0% | 62.7% |
| 3733286 | 2003.1.2.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 | 0.53 | 46.0 | 3.42e-01 | 95.7% | 50.5% |
| 3276001 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.53 | 44.0 | 3.26e-01 | 93.1% | 69.2% |
| 4017253 | 2003.4.1.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Tryptophan synthase beta subunit-like PLP-dependent enzymes › Tryptophan synthase beta subunit-like PLP-dependent enzymes › PALP | 0.53 | 43.0 | 4.15e-01 | 95.7% | 78.5% |
| 5028727 | 2006.1.6.15 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF58 | 0.52 | 46.0 | 3.68e-01 | 100.0% | 47.5% |
| 3394225 | 192.2.1.1 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 | 0.52 | 30.0 | 3.11e-01 | 75.9% | 56.5% |
| 4660219 | 2002.1.1.3 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › TIM | 0.52 | 45.0 | 3.56e-01 | 95.7% | 72.5% |
| 3694501 | 2003.1.3.28 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › FAD_binding_3 | 0.52 | 45.0 | 3.67e-01 | 96.6% | 85.0% |
| 3695677 | 2003.1.2.16 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 | 0.52 | 45.0 | 3.40e-01 | 95.7% | 52.1% |
| 3694980 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.52 | 44.0 | 3.39e-01 | 94.8% | 60.7% |
| 4018697 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.51 | 46.0 | 3.37e-01 | 99.1% | 42.9% |
| 3634181 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.51 | 47.0 | 3.13e-01 | 100.0% | 38.0% |
| 4973216 | 2485.1.1.4 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › AhpC-TSA | 0.51 | 34.0 | 3.59e-01 | 94.0% | 78.0% |
| 4406501 | 2003.1.3.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO | 0.51 | 44.0 | 3.51e-01 | 96.6% | 80.4% |
| 3210139 | 2003.1.2.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain | 0.51 | 46.0 | 3.34e-01 | 98.3% | 52.9% |
| 4870631 | 7579.1.1.44 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_6 | 0.50 | 43.0 | 3.46e-01 | 99.1% | 86.3% |
| 3739884 | 1016.1.1.1 ↗ | alpha arrays › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Pan3_PK | 0.50 | 35.0 | 3.42e-01 | 71.6% | 72.9% |
| 3217638 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.50 | 32.0 | 3.77e-01 | 74.1% | 98.7% |
| None | — | 0.50 | 43.0 | 3.28e-01 | 97.4% | 57.3% | |
| 4101322 | 2004.1.1.60 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SKI | 0.50 | 44.0 | 3.76e-01 | 100.0% | 89.4% |