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MT135024.1__QIW90344.1__OLCHANIL_00264__00234
Bact-VirMT135024.1__QIW90344.1__OLCHANIL_00264__00234
Identity
- Accession:
- MT135024 ↗
- Kingdom:
- phage
Quality
90.8
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Schizotequatrovirus›
Vibrio_phage_V05
TaxID: 2724325
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-38
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10127.16 best | RlaP | 26.0 | 9.60e-06 | 100.0% | 14.9% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rffA00 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.77 | 66.0 | 4.71e-01 | 97.4% | 33.3% |
| 6p8uA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.74 | 64.0 | 4.28e-01 | 100.0% | 27.8% |
| 7x4qA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.72 | 58.0 | 3.95e-01 | 94.7% | 34.4% |
| 4at7A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.72 | 61.0 | 4.08e-01 | 100.0% | 61.8% |
| 7x4pA01 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.69 | 55.0 | 3.74e-01 | 94.7% | 36.9% |
| 4fh3A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.68 | 57.0 | 3.99e-01 | 94.7% | 48.8% |
| 4oagB02 | 3.30.460.90 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.67 | 52.0 | 3.50e-01 | 100.0% | 42.5% |
| 1r89A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.65 | 50.0 | 3.55e-01 | 89.5% | 26.6% |
| 3hj4A02 | 3.30.460.10 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › Beta Polymerase, domain 2 | 0.61 | 48.0 | 3.48e-01 | 100.0% | 33.6% |
| 2b4vA02 | 3.30.460.50 | Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › | 0.59 | 46.0 | 3.37e-01 | 94.7% | 36.1% |
| 7dodB01 | 2.60.120.20 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 43.0 | 2.81e-01 | 86.8% | 76.7% |
ECOD (68)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5076994 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.88 | 68.0 | 4.82e-01 | 84.2% | 32.7% |
| 4939507 | 316.1.1.54 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › RlaP | 0.85 | 71.0 | 5.22e-01 | 94.7% | 43.0% |
| 5028355 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.85 | 63.0 | 4.69e-01 | 81.6% | 34.7% |
| 4937758 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.85 | 65.0 | 4.77e-01 | 84.2% | 33.7% |
| 3587323 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.84 | 74.0 | 4.70e-01 | 94.7% | 36.3% |
| 5054802 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.84 | 67.0 | 4.89e-01 | 94.7% | 34.0% |
| 5043156 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.84 | 71.0 | 5.00e-01 | 94.7% | 33.3% |
| 4944781 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.83 | 63.0 | 4.49e-01 | 84.2% | 30.9% |
| 4948413 | 327.7.1.18 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › NTP_transf_2 | 0.83 | 66.0 | 5.67e-01 | 92.1% | 56.7% |
| 5008179 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.82 | 62.0 | 4.58e-01 | 84.2% | 34.0% |
| 4993512 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.82 | 62.0 | 4.40e-01 | 84.2% | 28.9% |
| 5052094 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.82 | 58.0 | 4.31e-01 | 76.3% | 32.6% |
| 5029367 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.82 | 58.0 | 4.24e-01 | 76.3% | 51.0% |
| 4984735 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.82 | 68.0 | 4.56e-01 | 92.1% | 25.9% |
| 5038425 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.81 | 61.0 | 4.45e-01 | 84.2% | 32.4% |
| 4941550 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.81 | 61.0 | 4.27e-01 | 84.2% | 28.3% |
| 4948129 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.81 | 60.0 | 4.36e-01 | 81.6% | 29.5% |
| 4948740 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.80 | 62.0 | 4.40e-01 | 92.1% | 28.7% |
| 5039191 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.80 | 60.0 | 4.34e-01 | 84.2% | 31.5% |
| 3277511 | 316.1.1.54 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › RlaP | 0.80 | 68.0 | 4.70e-01 | 100.0% | 33.1% |
| 5014624 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.79 | 64.0 | 4.66e-01 | 94.7% | 33.7% |
| 4970363 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.79 | 67.0 | 4.77e-01 | 94.7% | 34.3% |
| 5028322 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.78 | 67.0 | 4.87e-01 | 94.7% | 36.4% |
| 4989145 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.78 | 63.0 | 4.39e-01 | 92.1% | 28.0% |
| 5052912 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.78 | 60.0 | 4.04e-01 | 84.2% | 22.9% |
| 4976993 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.78 | 67.0 | 4.46e-01 | 94.7% | 26.4% |
| 4993097 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.78 | 56.0 | 4.04e-01 | 78.9% | 50.0% |
| 4937865 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.78 | 57.0 | 4.13e-01 | 78.9% | 57.1% |
| 5043077 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.78 | 65.0 | 4.46e-01 | 94.7% | 28.5% |
| 4967162 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.78 | 58.0 | 4.27e-01 | 81.6% | 59.0% |
| 3415193 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.78 | 62.0 | 3.93e-01 | 92.1% | 18.4% |
| 4934738 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.77 | 63.0 | 4.74e-01 | 94.7% | 37.9% |
| 4977272 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.77 | 59.0 | 4.36e-01 | 94.7% | 31.5% |
| 5030739 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.76 | 57.0 | 4.08e-01 | 89.5% | 27.8% |
| 4944618 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.76 | 58.0 | 4.22e-01 | 94.7% | 29.6% |
| 5064964 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.76 | 56.0 | 4.28e-01 | 84.2% | 33.7% |
| 5077052 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.76 | 56.0 | 3.86e-01 | 81.6% | 41.0% |
| 5039586 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.76 | 59.0 | 4.37e-01 | 94.7% | 32.4% |
| 4937381 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.75 | 60.0 | 4.45e-01 | 92.1% | 36.0% |
| 4933356 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.75 | 61.0 | 4.17e-01 | 94.7% | 25.9% |
| 3832932 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.75 | 58.0 | 3.83e-01 | 89.5% | 21.3% |
| 3602696 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.75 | 57.0 | 4.27e-01 | 84.2% | 32.0% |
| 5039133 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.75 | 61.0 | 4.46e-01 | 94.7% | 34.3% |
| 5074409 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.73 | 61.0 | 4.16e-01 | 94.7% | 25.7% |
| 5032550 | 316.1.1.27 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › Polbeta | 0.73 | 56.0 | 3.95e-01 | 92.1% | 25.4% |
| 5031105 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.73 | 62.0 | 4.39e-01 | 94.7% | 31.3% |
| 3743587 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.73 | 60.0 | 4.14e-01 | 92.1% | 29.2% |
| 4958311 | 327.2.1.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › BolA-like › BolA-like › NTP_transf_2 | 0.73 | 57.0 | 4.48e-01 | 94.7% | 41.2% |
| 3958895 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.72 | 56.0 | 4.16e-01 | 92.1% | 64.5% |
| 3707158 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.72 | 60.0 | 3.82e-01 | 94.7% | 31.4% |
| 3244701 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.72 | 56.0 | 3.73e-01 | 94.7% | 20.0% |
| 4934691 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.71 | 55.0 | 4.16e-01 | 92.1% | 35.0% |
| 3271052 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.71 | 59.0 | 3.99e-01 | 94.7% | 29.7% |
| 5000146 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.71 | 55.0 | 3.88e-01 | 92.1% | 26.9% |
| 3665261 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.70 | 59.0 | 3.73e-01 | 100.0% | 18.6% |
| 5074441 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.70 | 51.0 | 3.89e-01 | 76.3% | 32.6% |
| 3635775 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.70 | 58.0 | 3.80e-01 | 89.5% | 28.1% |
| 3595889 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.69 | 56.0 | 3.91e-01 | 94.7% | 48.1% |
| 5076343 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.68 | 52.0 | 3.72e-01 | 94.7% | 25.2% |
| 5051567 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.68 | 51.0 | 3.95e-01 | 84.2% | 34.0% |
| 5027168 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.68 | 47.0 | 3.57e-01 | 76.3% | 31.0% |
| 3744790 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.67 | 54.0 | 3.92e-01 | 94.7% | 30.4% |
| 3738640 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.67 | 54.0 | 3.91e-01 | 92.1% | 32.2% |
| 4997332 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.66 | 50.0 | 3.70e-01 | 92.1% | 29.6% |
| 3259679 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.66 | 50.0 | 3.48e-01 | 92.1% | 23.3% |
| 4950996 | 316.1.1.2 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › NTP_transf_2 | 0.66 | 52.0 | 4.03e-01 | 92.1% | 36.8% |
| 3714013 | 1.1.7.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AARP2CN | 0.65 | 51.0 | 4.46e-01 | 97.4% | 55.4% |
| 3736889 | 316.1.1.36 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › MTPAP-like_central | 0.64 | 53.0 | 3.54e-01 | 94.7% | 42.5% |