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MT135025.1__QIW90394.1__GCAPEGMB_00047__00047

Bact-Vir

MT135025.1__QIW90394.1__GCAPEGMB_00047__00047

Identity

Accession:
MT135025 ↗
Kingdom:
phage

Quality

94.1 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Schizotequatrovirus› Vibrio_phage_V07

TaxID: 2724326

Cluster

View cluster (27 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-78
PDB
Domain cluster: representative
CATH (46)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jbwA01 1.20.1440.110 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › acylaminoacyl peptidase 0.71 60.0 5.49e-01 100.0% 69.9%
1sumB01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.71 51.0 4.50e-01 74.0% 72.0%
2i0mA01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.71 51.0 4.52e-01 74.0% 70.8%
2hz8A00 1.20.120.660 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › IL-4 antagonist (De novo design) like domain 0.70 49.0 4.27e-01 72.7% 60.0%
3vwaA03 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.70 43.0 2.89e-01 75.3% 16.1%
1zymA02 1.10.274.10 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › PtsI, HPr-binding domain 0.69 60.0 5.20e-01 100.0% 75.4%
2qwoB00 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.69 53.0 4.97e-01 80.5% 88.0%
4p3fA00 1.10.3450.40 Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › Signal recognition particle, SRP68 subunit, RNA-binding domain 0.68 52.0 3.81e-01 79.2% 38.3%
2ap3A00 1.20.120.570 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YkyA-like 0.66 45.0 3.38e-01 71.4% 51.6%
7kypB01 1.10.3470.10 Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC 0.65 53.0 3.67e-01 92.2% 81.6%
2c0gA02 1.20.1150.12 Mainly Alpha › Up-down Bundle › Endoplasmic reticulum protein erp29 › Endoplasmic reticulum resident protein 29, C-terminal domain 0.65 58.0 5.24e-01 100.0% 77.4%
2bvlA01 1.20.58.1190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 54.0 5.22e-01 89.6% 89.5%
4akgA04 1.20.58.1120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Dynein motor heavy chain, linker domain, subdomain 4 0.65 54.0 4.23e-01 89.6% 51.9%
5n17A01 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.65 57.0 5.17e-01 100.0% 87.5%
5domA00 1.10.110.10 Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins 0.64 48.0 4.58e-01 80.5% 100.0%
3q2eA00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.63 53.0 4.91e-01 100.0% 89.7%
4ip8A00 1.10.132.110 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Serum amyloid A protein 0.63 44.0 4.00e-01 79.2% 52.4%
1pjrA04 1.10.486.10 Mainly Alpha › Orthogonal Bundle › PCRA; domain 4 › PCRA; domain 4 0.63 48.0 4.06e-01 85.7% 85.7%
1ugoA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.63 49.0 4.44e-01 81.8% 83.8%
3n2oA03 1.20.58.930 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 50.0 4.62e-01 85.7% 75.0%
3r6nA02 1.20.58.1060 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 43.0 3.45e-01 72.7% 40.6%
1sxjD03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.61 41.0 3.97e-01 92.2% 59.3%
1eteA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.60 52.0 4.30e-01 96.1% 54.5%
1j1jA01 1.20.58.190 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 1 0.59 43.0 3.62e-01 76.6% 54.5%
2f3oA00 3.20.70.20 Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › 0.59 44.0 2.55e-01 81.8% 32.6%
3fseB02 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.58 51.0 4.21e-01 100.0% 74.3%
3zheA02 1.25.40.760 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.58 40.0 2.97e-01 72.7% 51.2%
1sj8A02 1.20.120.230 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like 0.58 49.0 4.34e-01 100.0% 100.0%
4n4uB00 3.40.190.170 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Bacterial extracellular solute-binding protein, family 7 0.58 47.0 3.22e-01 93.5% 72.2%
2ds2D01 1.10.110.10 Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins 0.58 39.0 4.34e-01 79.2% 94.7%
4mcwA02 1.10.3210.10 Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 0.57 47.0 3.61e-01 93.5% 52.8%
1ivhA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.57 50.0 4.15e-01 100.0% 87.9%
1rx0A03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.57 50.0 4.03e-01 100.0% 80.6%
2lseA00 1.20.120.1360 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › 0.57 49.0 4.57e-01 100.0% 82.2%
6tblB01 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.56 47.0 4.09e-01 89.6% 75.7%
2vy1A00 1.10.4180.10 Mainly Alpha › Orthogonal Bundle › Protein LEAFY › Protein LEAFY 0.56 47.0 3.78e-01 97.4% 87.7%
4nooB00 1.10.8.1160 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.56 39.0 3.68e-01 74.0% 69.5%
2ggfA00 1.25.40.180 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.56 39.0 3.37e-01 80.5% 43.1%
4by6A01 1.25.40.790 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.54 44.0 3.04e-01 89.6% 43.0%
4e12A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.54 43.0 3.21e-01 90.9% 34.2%
3qmlD00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.53 41.0 2.86e-01 85.7% 32.6%
3u61D03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.53 39.0 3.75e-01 94.8% 69.2%
2ip6A00 1.20.1440.140 Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 0.53 45.0 4.37e-01 100.0% 89.7%
1o4wA00 3.40.50.1010 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 5'-nuclease 0.52 42.0 3.56e-01 98.7% 53.6%
7ldgA00 1.25.10.10 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › Leucine-rich Repeat Variant 0.51 40.0 2.93e-01 85.7% 41.4%
4ex8A00 3.40.1790.10 Alpha Beta › 3-Layer(aba) Sandwich › Indigoidine synthase fold › Indigoidine synthase domain 0.50 43.0 2.93e-01 96.1% 50.5%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3650972 630.1.1.1 ↗ a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › Rubis-subs-bind 0.89 70.0 5.71e-01 81.8% 58.5%
3310955 630.1.1.1 ↗ a+b complex topology › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › RuBisCo LSMT C-terminal, substrate-binding domain › Rubis-subs-bind 0.83 65.0 5.33e-01 81.8% 61.5%
5052609 180.1.1.1 ↗ alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2 0.79 59.0 3.99e-01 80.5% 23.0%
3689992 2.1.1.0 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 52.0 3.41e-01 80.5% 18.3%
3274511 601.19.1.31 ↗ alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › ICAT 0.76 45.0 4.49e-01 72.7% 57.5%
4236831 604.6.1.50 ↗ alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › DUF2524 0.76 54.0 5.37e-01 74.0% 83.7%
3768254 604.3.1.1 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG 0.70 56.0 5.23e-01 85.7% 90.5%
3832907 192.18.1.0 ↗ alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.68 60.0 3.64e-01 100.0% 38.3%
3979768 633.12.1.0 ↗ alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like 0.68 60.0 5.49e-01 97.4% 94.0%
4928044 5065.1.1.1 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3 0.68 54.0 3.77e-01 88.3% 85.8%
4074758 5065.1.1.1 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3 0.67 54.0 3.71e-01 88.3% 82.5%
3526105 604.3.1.18 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › PF27519 0.67 49.0 4.67e-01 76.6% 72.2%
3930703 632.22.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.67 60.0 5.45e-01 97.4% 87.0%
4075906 5065.1.1.1 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3 0.67 55.0 3.81e-01 92.2% 84.7%
4984673 5065.1.1.1 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3 0.67 53.0 3.67e-01 87.0% 84.5%
3918623 174.1.1.43 ↗ few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › CD20 0.67 61.0 4.89e-01 100.0% 75.2%
3388607 603.1.1.105 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › PF31021 0.66 47.0 4.26e-01 72.7% 81.0%
3684562 109.4.1.480 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TMEM214 0.66 53.0 3.73e-01 84.4% 44.4%
3424514 606.1.1.0 ↗ alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain 0.66 47.0 4.09e-01 97.4% 48.3%
3691898 109.4.1.330 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › BIG2_C 0.66 43.0 3.08e-01 77.9% 21.7%
4522597 5065.1.1.1 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3 0.65 52.0 3.63e-01 88.3% 86.5%
2817087 5065.1.1.1 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3 0.65 53.0 3.65e-01 92.2% 77.9%
3983080 5065.1.1.1 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3 0.65 53.0 3.63e-01 92.2% 79.3%
3166045 5065.1.1.1 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3 0.65 51.0 3.60e-01 88.3% 88.6%
4015173 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.63 48.0 4.07e-01 81.8% 79.2%
3735029 7015.1.1.0 ↗ alpha bundles › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain › Palmitoyltransferase DHHC transmembrane domain 0.63 48.0 4.06e-01 81.8% 81.5%
3602825 633.12.1.0 ↗ alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like 0.63 58.0 4.82e-01 100.0% 61.5%
3655748 601.1.2.118 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › I/LWEQ domain (Pfam 01608) › CASP_dom 0.61 52.0 4.32e-01 98.7% 79.1%
4954779 5065.1.1.1 ↗ alpha bundles › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › Type II ABC importer transmembrane domain fold › ABC-3 0.60 48.0 3.46e-01 92.2% 90.2%
3562699 3736.1.1.0 ↗ alpha superhelices › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 › NLRC4 helical domain HD2 0.59 46.0 4.01e-01 84.4% 89.2%
3785094 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.59 43.0 3.96e-01 76.6% 68.0%
3726725 109.4.1.560 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Mus7 0.58 50.0 3.28e-01 98.7% 22.8%
3670152 5069.1.3.24 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › TIC20 0.58 43.0 3.53e-01 79.2% 56.6%
2997836 150.3.1.18 ↗ alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › Flt3_lig 0.58 52.0 4.21e-01 100.0% 52.4%
3740780 604.12.1.2 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain › Vta1 0.56 43.0 4.42e-01 89.6% 89.3%
1140569 101.34.1.1 ↗ alpha arrays › HTH › Transcription factor LEAFY › Transcription factor LEAFY › C_LFY_FLO 0.55 46.0 3.79e-01 97.4% 90.5%
3935113 106.1.1.0 ↗ alpha arrays › Globin-like › Globin-like › Globin-like 0.55 47.0 3.74e-01 100.0% 84.7%
3992748 109.4.1.289 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Rib_mS39_PPR 0.55 42.0 2.87e-01 84.4% 50.7%
3176866 109.4.1.229 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SIL1 0.53 45.0 3.01e-01 93.5% 39.7%
3911689 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 40.0 3.97e-01 87.0% 96.5%
D2 high residues 86-135
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF09424.16 best YqeY 30.5 5.10e-07 100.0% 33.6%
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1s7zA01 1.20.120.780 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DNA mimic ocr 0.78 68.0 5.44e-01 100.0% 90.1%
3vw4A01 1.10.340.50 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › 0.77 65.0 5.44e-01 100.0% 67.4%
2doeA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.72 61.0 5.26e-01 100.0% 63.9%
4fqgA02 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.71 59.0 5.67e-01 100.0% 90.2%
3mwmA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 58.0 5.21e-01 100.0% 65.3%
1l9lA00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.70 58.0 5.26e-01 100.0% 79.7%
2xzmV01 1.10.60.20 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › Ribosomal protein S17 0.70 59.0 5.63e-01 100.0% 86.9%
2p5kA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 57.0 5.38e-01 100.0% 77.8%
2xigA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 59.0 4.96e-01 100.0% 58.2%
1mzbA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 4.94e-01 98.0% 63.4%
2djoA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 54.0 4.60e-01 100.0% 51.7%
3lapA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 55.0 5.15e-01 100.0% 72.1%
1u78A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 52.0 5.44e-01 100.0% 95.6%
2lbfB01 1.10.10.1410 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.68 54.0 4.99e-01 98.0% 68.1%
1le8A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 53.0 5.25e-01 100.0% 84.9%
1ks9A02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.68 56.0 4.35e-01 100.0% 52.8%
2da3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 51.0 5.17e-01 100.0% 95.7%
1b72A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 51.0 4.77e-01 100.0% 67.6%
2ld5A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 50.0 4.67e-01 100.0% 67.2%
1zq3P00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 51.0 4.66e-01 100.0% 66.2%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.64 48.0 4.48e-01 100.0% 63.4%
1td6A03 1.10.472.40 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Hypothetical protein mg237 homolog; domain 3 0.63 42.0 3.55e-01 70.0% 48.9%
2vxdA00 1.10.10.2100 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Nucleophosmin, C-terminal domain 0.62 51.0 5.03e-01 98.0% 94.4%
1qo0D02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 43.0 4.45e-01 76.0% 82.6%
7e42A01 1.10.1200.10 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › ACP-like 0.61 49.0 4.33e-01 90.0% 83.8%
1zp2A02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.60 48.0 3.91e-01 98.0% 48.2%
3umbA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.60 52.0 4.50e-01 100.0% 81.0%
2om6A02 1.10.150.400 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 0.60 46.0 4.06e-01 88.0% 69.6%
2cufA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 48.0 4.45e-01 100.0% 84.7%
3zhiA00 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.60 42.0 3.74e-01 74.0% 98.6%
7s0rB01 1.20.81.20 Mainly Alpha › Up-down Bundle › Receptor-associated Protein › 0.59 40.0 3.50e-01 72.0% 47.4%
1s8nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.58 40.0 3.90e-01 74.0% 65.5%
2khvA01 1.10.150.130 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain 0.57 45.0 3.98e-01 98.0% 65.9%
4dbgB01 6.10.140.1100 Special › Helix non-globular › Helix Hairpins › 0.57 39.0 4.01e-01 84.0% 78.7%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.56 45.0 3.78e-01 100.0% 50.5%
1fmjA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.56 45.0 2.85e-01 100.0% 59.9%
1fc6A01 3.30.750.44 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › 0.55 42.0 3.46e-01 86.0% 86.7%
1u5pA01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.52 43.0 3.38e-01 94.0% 75.9%
2rhmC00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 43.0 2.97e-01 100.0% 78.4%
5hxgB00 1.10.4000.10 Mainly Alpha › Orthogonal Bundle › Flagellar transcriptional activator fold › Flagellar transcriptional activator FlhD 0.51 35.0 3.31e-01 96.0% 58.5%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3931388 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.79 64.0 6.26e-01 100.0% 81.8%
3597746 101.1.2.127 ↗ alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.77 68.0 5.82e-01 100.0% 70.0%
3576763 101.1.1.332 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Nucleolin_bd 0.77 67.0 6.12e-01 98.0% 81.5%
4932863 101.1.2.947 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27234 0.76 64.0 5.62e-01 100.0% 62.5%
4960514 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.76 63.0 5.11e-01 98.0% 49.0%
4169204 101.35.1.0 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.75 66.0 6.43e-01 100.0% 92.7%
3219897 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.75 58.0 5.85e-01 100.0% 88.0%
5053839 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 63.0 5.59e-01 98.0% 78.7%
3346039 101.35.1.23 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX › Ovate 0.74 61.0 6.06e-01 98.0% 100.0%
3733392 101.1.2.166 ↗ alpha arrays › HTH › HTH › winged helix domain › MCM6_C 0.74 65.0 4.96e-01 100.0% 58.3%
4026719 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.74 64.0 4.81e-01 100.0% 44.8%
3227144 3277.2.1.1 ↗ alpha arrays › Thymine dioxygenase JBP1 DNA-binding domain-like › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › a C-terminal domain in chromodomain helicase DNA-binding protein 1 › CHD1-like_C 0.73 63.0 5.04e-01 100.0% 73.3%
4979742 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.73 65.0 5.55e-01 100.0% 67.5%
5082325 3705.1.1.3 ↗ alpha arrays › Bacterial chaperone lipoprotein (PulS_OutS) › Bacterial chaperone lipoprotein (PulS_OutS) › Bacterial chaperone lipoprotein (PulS_OutS) › Phage_holin_6_1 0.73 61.0 5.59e-01 100.0% 84.3%
3740778 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.73 61.0 5.48e-01 100.0% 89.3%
3646179 4030.1.1.20 ↗ alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › Ovate 0.73 60.0 5.91e-01 100.0% 98.2%
4446563 101.1.2.318 ↗ alpha arrays › HTH › HTH › winged helix domain › HSD3 0.72 59.0 5.71e-01 100.0% 90.0%
3502282 168.1.1.1 ↗ alpha arrays › Sec7 domain › Sec7 domain › Sec7 domain › Sec7 0.72 63.0 4.24e-01 100.0% 52.9%
3396226 212.1.1.3 ↗ a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › GHMP_kinases_N 0.71 61.0 3.97e-01 100.0% 34.2%
5027755 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.71 56.0 4.92e-01 92.0% 62.5%
4189431 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 61.0 5.99e-01 100.0% 92.7%
4053752 103.1.1.6 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C 0.70 46.0 4.39e-01 70.0% 56.7%
3479827 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 60.0 5.06e-01 100.0% 56.8%
5042704 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 60.0 5.55e-01 100.0% 93.8%
3580853 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.69 57.0 5.37e-01 100.0% 83.1%
3393405 101.1.1.65 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Myb_DNA-bind_4 0.69 58.0 4.84e-01 100.0% 61.1%
3243454 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.69 53.0 5.10e-01 100.0% 75.0%
3423943 1128.1.1.2 ↗ alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR_2 0.68 45.0 3.87e-01 74.0% 42.5%
4934293 4993.1.1.0 ↗ extended segments › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit › Glu-tRNAGln amidotransferase C subunit 0.68 56.0 4.95e-01 100.0% 62.5%
3614557 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.68 57.0 4.26e-01 100.0% 35.7%
4362811 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.68 56.0 5.54e-01 100.0% 92.7%
3886268 3919.1.1.0 ↗ alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 0.68 57.0 4.54e-01 100.0% 51.8%
3255248 101.35.1.0 ↗ alpha arrays › HTH › DNA repair regulatory protein RecX › DNA repair regulatory protein RecX 0.67 56.0 5.10e-01 98.0% 75.7%
3178452 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.67 57.0 5.27e-01 98.0% 75.4%
3726085 101.1.2.127 ↗ alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.67 54.0 4.74e-01 100.0% 64.7%
3590474 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.67 54.0 4.62e-01 98.0% 55.3%
3946360 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.67 54.0 5.04e-01 98.0% 72.3%
4571183 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.66 57.0 4.56e-01 100.0% 87.6%
4940687 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.66 54.0 5.14e-01 100.0% 83.1%
3935995 101.1.2.127 ↗ alpha arrays › HTH › HTH › winged helix domain › Cullin_Nedd8 0.66 54.0 4.89e-01 100.0% 76.0%
3881313 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.65 53.0 4.99e-01 100.0% 75.4%
3661393 1128.1.1.0 ↗ alpha bundles › LYR protein › LYR protein › LYR protein 0.65 42.0 3.86e-01 74.0% 48.6%
3709004 4030.1.1.0 ↗ alpha bundles › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz › alpha-helical domain in subunits of heterodimeric actin filament capping protein Capz 0.64 52.0 5.15e-01 98.0% 89.1%
3618000 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.63 44.0 3.83e-01 76.0% 56.5%
4428553 103.1.1.6 ↗ alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › RuvA_C 0.63 42.0 3.97e-01 70.0% 59.4%
5058464 186.1.1.4 ↗ alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N › Phage_int_SAM_4 0.62 48.0 4.25e-01 100.0% 56.2%
4990528 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.62 52.0 4.45e-01 100.0% 96.5%
3927016 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.62 51.0 3.62e-01 100.0% 32.6%
3196401 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.61 49.0 4.80e-01 100.0% 87.3%
5033360 101.1.1.131 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Arch_fla_DE 0.61 52.0 4.45e-01 100.0% 58.8%
3834278 4133.1.1.1 ↗ alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › ENT 0.59 49.0 4.59e-01 100.0% 80.0%
3607327 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.59 48.0 4.63e-01 100.0% 91.7%
4473504 304.136.1.3 ↗ a+b two layers › Alpha-beta plaits › Oligo-peptide binding protein (OPPA) insertion domain › Oligo-peptide binding protein (OPPA) insertion domain › SGIII 0.59 45.0 4.00e-01 98.0% 54.4%
3941666 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.59 45.0 4.18e-01 100.0% 64.9%
3994704 108.1.1.0 ↗ alpha arrays › EF-hand › EF-hand-related › EF-hand 0.58 47.0 4.44e-01 96.0% 95.4%
3960463 103.12.1.0 ↗ alpha arrays › RuvA-C › ANTAR domain › ANTAR domain 0.58 41.0 3.91e-01 76.0% 63.3%
5036863 2006.1.1.18 ↗ a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.56 45.0 3.02e-01 94.0% 24.2%
3729174 129.1.1.0 ↗ alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like 0.54 41.0 3.23e-01 90.0% 37.7%
5062669 632.23.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Helical linker domain in nicking endonuclease N.BspD6I › Helical linker domain in nicking endonuclease N.BspD6I 0.53 39.0 3.42e-01 78.0% 53.4%
5060846 632.22.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.52 37.0 3.25e-01 76.0% 50.7%