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MT135025.1__QIW90542.1__GCAPEGMB_00195__00195

Bact-Vir

MT135025.1__QIW90542.1__GCAPEGMB_00195__00195

Identity

Accession:
MT135025 ↗
Kingdom:
phage

Quality

83.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 160-217
PDB
CATH (71)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.85 75.0 6.98e-01 98.3% 77.5%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.84 75.0 7.54e-01 100.0% 96.6%
6az1E03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.84 74.0 6.82e-01 98.3% 76.4%
4ft4B01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.81 72.0 5.30e-01 100.0% 60.0%
7cceA01 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.81 72.0 5.28e-01 100.0% 57.6%
1w4sA00 2.30.30.490 Mainly Beta › Roll › SH3 type barrels. › Bromo adjacent homology (BAH) domain 0.81 72.0 5.32e-01 100.0% 54.1%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.79 68.0 6.16e-01 100.0% 71.4%
3m9qA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 67.0 6.30e-01 98.3% 91.7%
4b6mB00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.76 68.0 6.13e-01 100.0% 93.7%
2gfaB01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 67.0 6.59e-01 100.0% 93.5%
2h1eA02 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.74 53.0 5.48e-01 75.9% 89.1%
1txqA00 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.74 66.0 6.12e-01 100.0% 98.6%
1e0bA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.73 54.0 5.32e-01 86.2% 73.8%
2e6nA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 60.0 4.94e-01 100.0% 51.0%
4xtvB02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 55.0 5.94e-01 94.8% 100.0%
2budA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.72 62.0 5.38e-01 98.3% 69.6%
1i1jB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 58.0 4.93e-01 96.6% 73.1%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 62.0 5.93e-01 100.0% 87.0%
6cnhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.70 51.0 4.61e-01 91.4% 56.2%
3a5zB01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 59.0 5.84e-01 98.3% 92.1%
3u4vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 50.0 4.06e-01 79.3% 43.1%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 57.0 5.65e-01 98.3% 92.1%
2kgtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 55.0 5.19e-01 94.8% 87.5%
4h75A00 2.80.10.70 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty 0.66 57.0 3.98e-01 100.0% 32.7%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 49.0 5.03e-01 96.6% 91.1%
1n7vA01 2.105.10.10 Mainly Beta › 3 Propeller › Pseudo beta propeller › Pseudo beta propeller 0.65 52.0 3.72e-01 89.7% 42.9%
2fp8B00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.64 53.0 3.35e-01 93.1% 23.8%
1cboA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.64 51.0 3.25e-01 91.4% 64.2%
3oyyA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 52.0 5.13e-01 100.0% 87.9%
8djfA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.63 50.0 3.33e-01 93.1% 32.7%
1v1qA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.63 46.0 3.80e-01 79.3% 56.4%
8axiA01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.63 52.0 3.21e-01 93.1% 24.1%
2sfaA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.63 51.0 4.37e-01 89.7% 80.2%
6htnA01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.62 51.0 3.94e-01 93.1% 52.6%
3r4qA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.62 43.0 3.30e-01 89.7% 31.8%
3zfnA02 2.30.140.40 Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Pestivirus Npro endopeptidase C53, interaction domain 0.61 42.0 4.27e-01 74.1% 73.7%
3by8A00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.61 48.0 3.77e-01 89.7% 89.5%
2xepB01 3.10.450.280 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 43.0 3.54e-01 93.1% 39.5%
2ey4D00 2.40.10.230 Mainly Beta › Beta Barrel › Thrombin, subunit H › Probable tRNA pseudouridine synthase domain 0.60 49.0 4.51e-01 100.0% 69.3%
3ebwA01 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 51.0 3.90e-01 100.0% 69.7%
3d9wA02 2.40.128.150 Mainly Beta › Beta Barrel › Lipocalin › Cysteine proteinases 0.59 42.0 3.53e-01 77.6% 80.4%
1jsgA00 2.40.15.10 Mainly Beta › Beta Barrel › Proto-oncogene - Oncogene Product P14tcl1 › TCL1/MTCP1 0.58 45.0 3.61e-01 82.8% 80.2%
1jz7A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 41.0 3.38e-01 75.9% 93.9%
2cztA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.58 49.0 3.69e-01 100.0% 71.6%
4n04A00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.58 42.0 3.40e-01 77.6% 82.0%
8aimG01 3.10.450.20 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Bacteriophage PBS2, uracil-glycosylase inhibitor 0.57 46.0 4.21e-01 91.4% 85.2%
2jiiA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 48.0 3.98e-01 96.6% 81.8%
2ktyA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 47.0 3.71e-01 96.6% 73.1%
1g0sA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.56 42.0 2.96e-01 84.5% 62.7%
3h6qA00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.56 46.0 3.47e-01 100.0% 98.2%
4ebrA00 3.30.1460.50 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.56 47.0 3.55e-01 100.0% 88.5%
2vtfA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 39.0 3.46e-01 75.9% 93.4%
2qubA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 44.0 2.82e-01 91.4% 53.5%
1r5bA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 48.0 4.20e-01 100.0% 67.4%
3h3hB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 43.0 3.55e-01 91.4% 87.5%
2qkdA01 2.20.25.420 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › ZPR1, zinc finger domain 0.55 40.0 4.24e-01 79.3% 100.0%
3ia8A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.55 44.0 3.26e-01 89.7% 72.8%
4pj2A00 2.40.128.460 Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme 0.54 43.0 3.50e-01 91.4% 77.7%
4htgA03 3.30.160.40 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Porphobilinogen deaminase, C-terminal domain 0.54 46.0 4.20e-01 98.3% 83.5%
3a58A01 2.30.29.90 Mainly Beta › Roll › PH-domain like › 0.54 44.0 3.22e-01 94.8% 55.2%
4dy0B02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.54 40.0 3.22e-01 82.8% 86.7%
6j8yA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.54 42.0 2.80e-01 87.9% 46.7%
4xrtA02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 44.0 3.38e-01 100.0% 80.6%
2f96A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.54 43.0 3.04e-01 93.1% 49.8%
1ei5A03 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.52 44.0 3.76e-01 100.0% 87.3%
6u5uG07 3.30.1120.100 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.52 42.0 3.28e-01 91.4% 75.8%
2a6hC05 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.51 38.0 3.57e-01 82.8% 69.3%
3eliA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 41.0 3.22e-01 94.8% 77.8%
4e19A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.51 35.0 2.81e-01 74.1% 80.5%
3aapA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.51 34.0 2.84e-01 74.1% 55.2%
1jv2B04 4.10.1240.30 Few Secondary Structures › Irregular › Hormone receptor fold › 0.51 37.0 3.41e-01 84.5% 91.9%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4974669 4.1.1.458 beta barrels › SH3 › SH3 › SH3 › DUF2098 0.89 71.0 6.01e-01 100.0% 54.4%
5017637 4.1.1.458 beta barrels › SH3 › SH3 › SH3 › DUF2098 0.88 68.0 6.95e-01 98.3% 85.5%
4605602 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.87 76.0 7.28e-01 96.6% 83.1%
3660964 4.1.1.6 beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C 0.86 77.0 6.26e-01 100.0% 56.0%
5004050 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 69.0 6.48e-01 100.0% 72.9%
567 4.1.1.48 beta barrels › SH3 › SH3 › SH3 › DHFR_2 0.85 75.0 7.63e-01 100.0% 98.2%
4931822 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.84 71.0 6.82e-01 100.0% 81.5%
3698762 4.1.1.6 beta barrels › SH3 › SH3 › SH3 › KOW,40S_S4_C 0.84 75.0 6.05e-01 100.0% 54.4%
4029199 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 76.0 4.14e-01 100.0% 8.8%
3703932 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 76.0 7.58e-01 100.0% 96.7%
3598283 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.83 76.0 5.73e-01 100.0% 44.6%
3886139 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.81 74.0 7.16e-01 100.0% 92.3%
3259841 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.81 68.0 6.46e-01 94.8% 95.7%
3564972 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 73.0 6.81e-01 100.0% 82.9%
3670066 4.1.1.20 beta barrels › SH3 › SH3 › SH3 › BAH 0.79 70.0 5.10e-01 100.0% 51.6%
3824699 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.79 69.0 6.71e-01 100.0% 95.4%
3410370 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 70.0 6.60e-01 100.0% 92.9%
3433070 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 63.0 5.98e-01 100.0% 73.9%
3923766 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.78 69.0 5.51e-01 100.0% 76.5%
3927213 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.78 69.0 6.48e-01 100.0% 90.0%
5017073 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.77 69.0 5.04e-01 100.0% 38.7%
3686225 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 68.0 4.76e-01 100.0% 44.3%
3583597 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 64.0 5.50e-01 100.0% 58.9%
3954938 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 66.0 6.45e-01 100.0% 92.3%
3815495 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.76 68.0 6.38e-01 100.0% 91.4%
3638086 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 66.0 4.70e-01 100.0% 50.0%
3959531 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 66.0 6.27e-01 100.0% 84.3%
3550699 4.8.1.10 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.75 67.0 5.68e-01 100.0% 70.5%
3302166 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.74 65.0 6.29e-01 100.0% 95.4%
3368700 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 67.0 5.36e-01 100.0% 64.5%
4028885 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.74 65.0 6.33e-01 100.0% 90.8%
3663761 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 67.0 5.44e-01 100.0% 60.0%
3396897 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.73 62.0 6.11e-01 94.8% 96.8%
3585538 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.73 64.0 5.39e-01 100.0% 63.0%
4345080 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.73 64.0 6.18e-01 100.0% 90.8%
3793962 4.8.1.10 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like 0.73 64.0 5.56e-01 100.0% 68.9%
5048696 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 62.0 4.44e-01 100.0% 33.5%
3971321 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.71 62.0 5.91e-01 100.0% 92.8%
3530891 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.70 61.0 5.01e-01 100.0% 64.2%
3212772 4.8.1.6 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.70 62.0 5.72e-01 100.0% 82.4%
4038269 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.70 61.0 5.93e-01 100.0% 90.8%
3710561 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 58.0 5.67e-01 94.8% 100.0%
3995290 4.1.1.332 beta barrels › SH3 › SH3 › SH3 › Peptidase_C1 0.70 59.0 4.92e-01 100.0% 89.1%
3368536 5.1.3.152 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Str_synth, SSL_N 0.69 58.0 3.61e-01 93.1% 23.8%
4524363 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.69 60.0 5.80e-01 100.0% 90.8%
2557227 4.7.1.2 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF 0.69 61.0 5.55e-01 100.0% 79.2%
3460634 4.1.1.25 beta barrels › SH3 › SH3 › SH3 › PAZ 0.68 61.0 4.55e-01 100.0% 78.6%
4146937 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.68 58.0 5.62e-01 100.0% 90.8%
5020252 219.1.1.0 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.67 59.0 4.66e-01 100.0% 49.2%
5056878 5.1.2.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_32N 0.67 55.0 3.43e-01 93.1% 28.5%
5040571 5.1.4.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.66 54.0 3.18e-01 91.4% 19.8%
3593382 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.66 51.0 3.13e-01 89.7% 40.7%
3517149 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.66 46.0 2.85e-01 75.9% 17.1%
3670468 4.1.1.332 beta barrels › SH3 › SH3 › SH3 › Peptidase_C1 0.65 56.0 4.40e-01 100.0% 63.1%
4268049 244.1.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C 0.65 52.0 3.04e-01 89.7% 51.9%
3749245 4.1.1.31 beta barrels › SH3 › SH3 › SH3 › Spin-Ssty 0.65 56.0 4.40e-01 100.0% 51.5%
4987003 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.65 56.0 5.45e-01 100.0% 96.9%
4158157 4.1.1.57 beta barrels › SH3 › SH3 › SH3 › EFP_N 0.65 56.0 5.43e-01 100.0% 90.8%
9221 2003.1.2.2 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › GMC_oxred_N 0.64 51.0 3.28e-01 91.4% 88.7%
3289158 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.63 52.0 4.29e-01 93.1% 92.7%
3890539 295.1.1.0 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.62 42.0 4.20e-01 82.8% 68.3%
5045201 5.1.4.663 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › SBBP 0.62 49.0 2.96e-01 89.7% 25.8%
5053463 5.1.5.231 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › SBBP 0.61 50.0 3.22e-01 93.1% 27.7%
3744143 220.1.1.32 beta barrels › PH domain-like › PH domain-like › PH domain-like › Sec3-PIP2_bind 0.61 49.0 3.74e-01 93.1% 49.3%
3384982 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.61 44.0 3.63e-01 77.6% 69.5%
3928760 206.1.1.0 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.61 51.0 3.18e-01 98.3% 23.3%
3658750 220.1.1.78 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 0.60 50.0 4.04e-01 100.0% 76.8%
3277727 4.8.1.43 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › RNHCP 0.59 48.0 4.15e-01 91.4% 64.2%
3480327 220.1.1.4 beta barrels › PH domain-like › PH domain-like › PH domain-like › Ran_BP1 0.58 48.0 3.88e-01 96.6% 80.8%
4294052 11.1.1.42 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PapD_C 0.58 47.0 3.97e-01 89.7% 83.7%
3067253 243.8.1.2 a+b two layers › Cystatin-like › Uracil-DNA glycosylase inhibitor protein › Uracil-DNA glycosylase inhibitor protein › UDI 0.58 47.0 4.21e-01 93.1% 81.4%
4968081 375.1.1.299 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › CPxCG_zf 0.58 44.0 4.56e-01 89.7% 100.0%
3248970 101.1.12.0 alpha arrays › HTH › HTH › HTH motif inserted in other structures 0.57 47.0 3.80e-01 89.7% 94.5%
4115704 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.57 49.0 4.55e-01 98.3% 81.3%
5018715 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 44.0 4.36e-01 84.5% 100.0%
3195743 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.57 48.0 3.30e-01 100.0% 96.4%
3957605 243.1.1.35 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › ORF_12_N 0.56 45.0 3.90e-01 91.4% 91.6%
5004589 5.1.2.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.56 46.0 3.85e-01 96.6% 64.5%
3267845 220.1.1.2 beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.56 45.0 3.76e-01 96.6% 69.6%
3839028 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.56 40.0 3.93e-01 77.6% 89.2%
4314603 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.54 38.0 3.43e-01 75.9% 84.7%
3890869 220.1.1.2 beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.54 41.0 2.95e-01 84.5% 56.7%
3939687 220.1.1.2 beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.54 44.0 3.78e-01 94.8% 93.0%
3337433 2484.1.1.67 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RVT_3 0.53 37.0 3.41e-01 74.1% 82.5%
4054729 330.4.1.1 a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.52 43.0 4.06e-01 96.6% 84.0%
2658868 265.1.1.1 a+b two layers › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › RNA bacteriophage capsid protein › Levi_coat 0.51 42.0 3.26e-01 93.1% 49.3%
4008120 5.1.5.139 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF1481 0.51 43.0 3.53e-01 100.0% 95.0%
3943894 77.1.1.7 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › DUF1481 0.51 43.0 3.46e-01 100.0% 95.2%
D2 medium residues 13-78
PDB
CATH (41)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.79 59.0 5.92e-01 78.8% 92.4%
4gs3A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.78 55.0 4.96e-01 74.2% 96.7%
4b08A01 2.40.50.730 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.76 53.0 4.94e-01 72.7% 97.5%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.74 64.0 6.06e-01 93.9% 90.9%
3ic8A01 3.40.30.110 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › 0.70 51.0 3.75e-01 78.8% 29.9%
1fguB02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.68 47.0 3.80e-01 71.2% 44.4%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 58.0 5.33e-01 95.5% 76.7%
6ro0F00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.67 48.0 4.21e-01 75.8% 94.9%
6mlyB01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.67 46.0 3.08e-01 72.7% 30.9%
3u4vA00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.67 46.0 3.86e-01 72.7% 44.8%
6cnhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.66 41.0 3.90e-01 71.2% 51.2%
2gu3A01 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.65 44.0 4.49e-01 71.2% 76.9%
3nppA00 2.40.50.480 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 0.64 44.0 4.03e-01 71.2% 77.0%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.64 49.0 4.41e-01 83.3% 67.7%
2l2fA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.63 44.0 3.83e-01 74.2% 75.9%
2eyqA05 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.63 49.0 5.17e-01 83.3% 98.3%
4kghA00 3.15.10.10 Alpha Beta › Super Roll › Bactericidal permeability-increasing protein; domain 1 › Bactericidal permeability-increasing protein; domain 1 0.63 45.0 3.23e-01 75.8% 77.2%
1st8A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.62 55.0 3.49e-01 98.5% 76.0%
2o62A02 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.62 47.0 3.73e-01 81.8% 76.6%
2k5qA00 2.40.50.480 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 0.60 41.0 3.60e-01 72.7% 53.3%
6vp6A03 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.60 41.0 2.67e-01 72.7% 23.3%
2cztA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 47.0 3.66e-01 89.4% 70.3%
5hx0A00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.58 50.0 3.14e-01 97.0% 80.8%
1gteA04 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 44.0 3.44e-01 81.8% 98.0%
2n6eA00 3.40.1530.20 Alpha Beta › 3-Layer(aba) Sandwich › hypothetical protein tt1805 › Protein of unknown function (DUF1491) 0.58 42.0 3.58e-01 77.3% 52.7%
2lc4A00 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.58 45.0 3.86e-01 86.4% 74.8%
1a7tA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.58 43.0 2.96e-01 80.3% 25.1%
2d42A02 3.10.450.380 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 41.0 4.18e-01 75.8% 83.1%
1xjvA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 43.0 3.44e-01 84.8% 88.7%
4n4bA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.56 49.0 3.17e-01 100.0% 83.4%
2bvbA00 2.60.120.710 Mainly Beta › Sandwich › Jelly Rolls › Toxoplasma gondii micronemal protein 1 TgMIC1 0.56 46.0 3.75e-01 97.0% 75.2%
6htnA01 2.120.10.70 Mainly Beta › 6 Propeller › Neuraminidase › Fucose-specific lectin 0.55 46.0 3.69e-01 95.5% 65.0%
2jzlA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.54 44.0 3.68e-01 87.9% 64.9%
4a2lF02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 46.0 2.97e-01 95.5% 90.3%
2kr0A01 2.30.29.70 Mainly Beta › Roll › PH-domain like › Proteasomal ubiquitin receptor Rpn13/ADRM1 0.54 42.0 3.50e-01 83.3% 90.3%
1a1aB00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.54 45.0 3.94e-01 93.9% 97.1%
3n91A02 2.40.128.420 Mainly Beta › Beta Barrel › Lipocalin › 0.54 47.0 3.77e-01 100.0% 94.1%
4pj2A00 2.40.128.460 Mainly Beta › Beta Barrel › Lipocalin › Periplasmic lysozyme inhibitor of I-type lysozyme 0.53 37.0 3.11e-01 74.2% 47.9%
4xrtA02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 39.0 3.01e-01 80.3% 76.2%
2kf2A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 39.0 2.98e-01 80.3% 69.5%
2x5cA01 3.30.70.3590 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 38.0 3.53e-01 92.4% 60.4%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3578208 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 58.0 6.37e-01 77.3% 89.1%
3926120 4.1.1.169 beta barrels › SH3 › SH3 › SH3 › DUF4819 0.80 60.0 4.54e-01 78.8% 37.9%
3591211 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.79 59.0 5.50e-01 78.8% 83.7%
3210707 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.78 57.0 5.93e-01 77.3% 100.0%
3942573 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 61.0 6.49e-01 86.4% 96.6%
4932514 4.23.1.2 beta barrels › SH3 › Dom34/Pelota N-terminal domain-like › Dom34/Pelota N-terminal domain-like › PF26356 0.75 59.0 4.80e-01 84.8% 64.2%
3583597 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 52.0 4.66e-01 80.3% 53.3%
3959531 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 55.0 5.42e-01 80.3% 78.6%
3907176 4.1.1.248 beta barrels › SH3 › SH3 › SH3 › CABIT 0.72 55.0 4.98e-01 81.8% 72.2%
5031673 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 57.0 4.91e-01 89.4% 74.3%
3500694 325.1.2.1 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Molybdopterin synthase subunit MoaE › MoaE 0.70 49.0 3.56e-01 72.7% 72.7%
3973076 109.1.1.0 alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C 0.69 50.0 3.40e-01 77.3% 22.6%
4590247 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.69 52.0 4.92e-01 81.8% 72.5%
5057130 2008.1.1.16 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Mrr_cat 0.68 51.0 4.08e-01 78.8% 87.2%
3926676 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.67 47.0 3.60e-01 72.7% 47.3%
437095 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.67 46.0 3.86e-01 72.7% 44.8%
3948209 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 56.0 5.40e-01 100.0% 85.3%
4939488 2484.1.1.34 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1 0.65 47.0 3.07e-01 75.8% 92.4%
3615163 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 46.0 3.99e-01 75.8% 82.2%
3355345 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 45.0 4.42e-01 72.7% 75.7%
4214117 4.11.1.2 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S26 0.64 45.0 3.11e-01 72.7% 48.6%
3657702 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.64 44.0 3.53e-01 72.7% 40.0%
3659298 2.1.1.76 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.63 46.0 3.50e-01 78.8% 69.7%
3678038 2.1.1.76 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 0.63 43.0 4.15e-01 71.2% 76.0%
4810631 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.63 54.0 3.51e-01 100.0% 94.8%
4107647 243.18.1.1 a+b two layers › Cystatin-like › Maltokinase N-terminal domain › Maltokinase N-terminal domain › Mak_N_cap 0.63 46.0 4.11e-01 77.3% 80.0%
3875866 9.1.1.11 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 0.63 50.0 3.77e-01 89.4% 63.5%
4982958 4.6.1.2 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.62 54.0 4.78e-01 100.0% 87.0%
3296674 2.1.1.130 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.62 42.0 3.66e-01 72.7% 48.2%
3374948 2.1.1.130 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.62 48.0 4.15e-01 83.3% 98.0%
3770448 9.1.1.0 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins 0.61 45.0 3.46e-01 81.8% 82.4%
3653604 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.61 43.0 3.33e-01 74.2% 63.9%
3286878 9.1.1.11 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin_2 0.61 48.0 3.66e-01 89.4% 65.5%
5002490 2004.1.1.308 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_21 0.60 48.0 2.92e-01 86.4% 20.8%
4089593 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.59 42.0 3.44e-01 75.8% 72.3%
3274239 330.1.1.18 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DSRM_DHX29 0.59 43.0 3.60e-01 77.3% 60.0%
4031151 4056.1.1.0 beta barrels › Barrel domain in upper collar protein › Barrel domain in upper collar protein › Barrel domain in upper collar protein 0.59 46.0 4.48e-01 87.9% 97.3%
5010618 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 41.0 4.19e-01 72.7% 76.2%
3411605 394.1.1.0 few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins 0.58 36.0 3.92e-01 75.8% 75.9%
4929364 896.1.1.0 a+b two layers › SRP9/14-like › Signal recognition particle alu RNA binding heterodimer SRP9/14-related › Signal recognition particle alu RNA binding heterodimer SRP9/14-related 0.58 41.0 4.20e-01 77.3% 100.0%
3883825 220.1.1.173 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_CERK 0.58 49.0 4.07e-01 93.9% 78.0%
3560129 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.57 48.0 3.91e-01 93.9% 84.0%
1320520 243.16.1.1 a+b two layers › Cystatin-like › hypothetical protein CLOLEP_02462 › hypothetical protein CLOLEP_02462 › DUF6836 0.57 39.0 3.49e-01 72.7% 61.4%
158488 10.1.1.33 beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › TgMIC1 0.56 46.0 3.75e-01 97.0% 75.2%
4528716 3784.1.1.0 a+b two layers › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related › Putative lipoprotein CPF_1278-related 0.56 40.0 3.48e-01 77.3% 84.8%
4679671 330.6.1.1 a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › LeuA_dimer 0.55 43.0 3.65e-01 87.9% 89.8%
3658019 2.1.1.285 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC24_OB3, CDC24_OB2 0.55 43.0 2.81e-01 86.4% 63.7%
3727689 2008.1.1.143 a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › DUF7924 0.54 44.0 2.98e-01 89.4% 97.1%
3897308 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.54 45.0 3.40e-01 93.9% 66.5%
3999127 109.21.1.8 alpha superhelices › Repetitive alpha hairpins › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › Nucleoporin NUP85/Nucleoporin NUP145 C-terminal domain › WD40 0.54 45.0 2.60e-01 97.0% 19.2%
3837308 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.51 42.0 2.81e-01 97.0% 82.4%
3955267 331.3.1.5 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc 0.50 34.0 2.78e-01 71.2% 60.4%