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MT135025.1__QIW90704.1__GCAPEGMB_00385__00357

Bact-Vir

MT135025.1__QIW90704.1__GCAPEGMB_00385__00357

Identity

Accession:
MT135025 ↗
Kingdom:
phage

Quality

89.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Schizotequatrovirus› Vibrio_phage_V07

TaxID: 2724326

Cluster

View cluster (34 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 12-143
PDB
Domain cluster: rep: MT028491.1__QIG66049.1__phiOC_p407__00383__D25-155
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF23474.2 best Acb1 145.8 1.10e-42 100.0% 94.5%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1iuhA00 3.90.1140.10 Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase 0.80 75.0 6.60e-01 100.0% 88.0%
1jh6A00 3.90.1140.10 Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase 0.77 72.0 6.38e-01 100.0% 85.1%
2d4gA00 3.90.1140.10 Alpha Beta › Alpha-Beta Complex › Cyclic Phosphodiesterase; Chain: A, › Cyclic phosphodiesterase 0.71 66.0 6.06e-01 100.0% 91.0%
5i4dA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 27.0 3.44e-01 98.5% 78.9%
1u5kA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 27.0 3.31e-01 99.2% 76.8%
7o4xA01 3.30.70.120 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 29.0 3.30e-01 89.4% 71.7%
ECOD (15)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4972305 264.1.1.7 ↗ beta barrels › LigT-like › LigT-related › LigT-related › AKAP7_NLS 0.77 72.0 6.45e-01 100.0% 88.8%
4965442 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.77 71.0 6.64e-01 100.0% 95.0%
276 264.1.1.4 ↗ beta barrels › LigT-like › LigT-related › LigT-related › CPDase 0.77 72.0 6.38e-01 100.0% 85.1%
3338135 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.76 70.0 6.29e-01 100.0% 85.6%
5028063 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.75 70.0 6.32e-01 100.0% 88.0%
5062926 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.75 70.0 6.44e-01 100.0% 87.3%
5058094 264.1.1.1 ↗ beta barrels › LigT-like › LigT-related › LigT-related › LigT_PEase 0.74 68.0 6.18e-01 100.0% 90.3%
5063905 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.74 68.0 6.26e-01 100.0% 88.8%
4968059 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.73 68.0 6.06e-01 100.0% 89.4%
4046553 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.72 66.0 6.06e-01 100.0% 91.2%
4991838 264.1.1.9 ↗ beta barrels › LigT-like › LigT-related › LigT-related › 2_5_RNA_ligase2 0.72 55.0 5.55e-01 80.3% 90.2%
4193996 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.57 42.0 4.57e-01 100.0% 93.6%
3811669 2.1.1.130 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.54 30.0 3.26e-01 97.7% 63.6%
3791987 2.1.1.25 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_B_exo1 0.52 32.0 3.41e-01 72.0% 69.6%
3314558 2.1.1.130 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.51 29.0 2.85e-01 70.5% 49.3%