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MT135176.1__QIQ67980.1__X__00046

Bact-Vir

MT135176.1__QIQ67980.1__X__00046

Identity

Accession:
MT135176 ↗
Kingdom:
phage

Quality

84.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-64
PDB
CATH (56)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2k57A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.81 61.0 6.48e-01 87.3% 92.7%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 57.0 5.91e-01 87.3% 91.4%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.71 47.0 5.18e-01 82.5% 88.0%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.70 47.0 5.10e-01 92.1% 88.0%
2pm6D01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.69 49.0 3.16e-01 74.6% 22.9%
2codA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.69 53.0 4.64e-01 84.1% 97.9%
1icwB00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.69 49.0 4.83e-01 74.6% 86.4%
2ej9A02 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 46.0 4.98e-01 79.4% 89.8%
2i0rA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.66 47.0 2.96e-01 76.2% 18.0%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 44.0 4.89e-01 81.0% 91.5%
1sg5A01 2.30.30.400 Mainly Beta › Roll › SH3 type barrels. › Rof-like 0.65 53.0 5.03e-01 100.0% 75.3%
1f44A01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.65 48.0 3.41e-01 79.4% 52.1%
2a5hA03 6.20.120.40 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.64 34.0 3.45e-01 71.4% 51.6%
6jwfA01 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.64 54.0 3.31e-01 93.7% 98.7%
3l48A01 2.60.40.2070 Mainly Beta › Sandwich › Immunoglobulin-like › PapC, C-terminal domain 0.64 44.0 4.15e-01 100.0% 59.2%
3ab1B01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 54.0 3.81e-01 98.4% 87.3%
2q0lA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 54.0 3.93e-01 98.4% 93.6%
1hyuA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 53.0 3.90e-01 98.4% 94.0%
7c2fB01 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.62 43.0 3.91e-01 100.0% 53.5%
5ygqA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 53.0 3.70e-01 98.4% 83.1%
1rsgA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 54.0 3.65e-01 98.4% 93.1%
3j7aF03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.61 49.0 4.76e-01 88.9% 81.7%
3we0A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 52.0 3.47e-01 96.8% 77.0%
2hbpA00 2.30.30.700 Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 0.61 52.0 5.21e-01 100.0% 92.4%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 42.0 4.46e-01 81.0% 84.9%
3p1vA01 2.60.40.3250 Mainly Beta › Sandwich › Immunoglobulin-like › Peptidase M64, N-terminal domain 0.61 56.0 4.28e-01 100.0% 52.9%
4fk1A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 53.0 3.82e-01 98.4% 77.5%
4hb9A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 52.0 3.27e-01 98.4% 89.6%
2vouB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 51.0 3.52e-01 96.8% 76.2%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 48.0 4.78e-01 85.7% 85.1%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.60 40.0 4.42e-01 81.0% 91.7%
3dsoA00 2.40.10.300 Mainly Beta › Beta Barrel › Thrombin, subunit H › Copper resistance protein K 0.60 40.0 4.01e-01 100.0% 66.7%
3in6A02 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 52.0 4.31e-01 100.0% 60.7%
4b9wA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.60 44.0 4.63e-01 88.9% 91.1%
1aogA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 46.0 3.79e-01 87.3% 98.3%
2hqmA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 50.0 3.49e-01 98.4% 79.4%
2htdB00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 52.0 4.18e-01 100.0% 54.8%
3bgaA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 54.0 4.38e-01 100.0% 64.0%
5escA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.59 51.0 4.19e-01 100.0% 57.1%
4m52A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 48.0 3.44e-01 98.4% 79.3%
3i6dA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 49.0 3.77e-01 98.4% 95.5%
5c71A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 48.0 4.22e-01 100.0% 62.5%
3ci0J02 2.10.70.20 Mainly Beta › Ribbon › Complement Module; domain 1 › gspk-gspi-gspj complex like domains 0.57 38.0 4.15e-01 100.0% 88.0%
4fd0A01 2.60.40.3630 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 40.0 3.79e-01 76.2% 93.7%
1havB02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.56 47.0 4.12e-01 100.0% 74.8%
3wdhA01 2.60.40.2320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 43.0 3.81e-01 98.4% 57.3%
2l6oA01 2.40.10.320 Mainly Beta › Beta Barrel › Thrombin, subunit H › Uncharacterised protein PF13642 yp_926445, N-terminal domain 0.55 40.0 3.89e-01 100.0% 70.8%
6b4oA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 44.0 3.58e-01 87.3% 96.6%
2p4tA00 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.55 40.0 4.11e-01 87.3% 87.9%
3a9gA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.55 44.0 2.83e-01 92.1% 96.7%
3oqbH02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.54 45.0 3.07e-01 93.7% 67.4%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 40.0 4.22e-01 82.5% 96.3%
3klkA01 2.10.270.10 Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding 0.53 36.0 2.74e-01 71.4% 62.7%
2bhoA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.53 38.0 3.21e-01 77.8% 62.7%
2ww8A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 36.0 3.09e-01 74.6% 88.7%
6efaA02 3.10.20.890 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.50 42.0 3.97e-01 93.7% 96.2%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3968342 4.1.1.45 beta barrels › SH3 › SH3 › SH3 › DUF903 0.80 59.0 6.30e-01 84.1% 92.5%
3977126 4.1.1.45 beta barrels › SH3 › SH3 › SH3 › DUF903 0.80 60.0 6.33e-01 85.7% 90.9%
3979842 4.1.1.45 beta barrels › SH3 › SH3 › SH3 › DUF903 0.78 58.0 6.11e-01 85.7% 90.9%
25624 4.1.1.45 beta barrels › SH3 › SH3 › SH3 › DUF903 0.77 56.0 6.08e-01 84.1% 94.2%
5027750 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 55.0 5.84e-01 87.3% 92.7%
3886102 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.73 56.0 4.24e-01 82.5% 86.7%
4953223 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.72 49.0 5.34e-01 85.7% 90.0%
4951012 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.70 46.0 5.04e-01 81.0% 86.0%
5035177 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.70 50.0 5.33e-01 88.9% 88.9%
3775000 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 51.0 3.96e-01 81.0% 82.1%
4012273 5.1.3.39 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › TrAA12 0.69 56.0 3.37e-01 88.9% 95.3%
5022798 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.69 48.0 2.82e-01 73.0% 10.2%
None 0.69 56.0 3.42e-01 90.5% 98.8%
5081442 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.68 53.0 5.16e-01 92.1% 75.7%
5024227 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 53.0 5.31e-01 85.7% 87.3%
3712219 4.1.1.19 beta barrels › SH3 › SH3 › SH3 › LSM 0.68 52.0 5.22e-01 85.7% 81.5%
4982561 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.68 45.0 4.98e-01 81.0% 93.3%
5003618 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.68 44.0 4.99e-01 79.4% 93.3%
3989485 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.68 47.0 5.12e-01 81.0% 92.0%
5058457 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.68 48.0 4.84e-01 79.4% 73.8%
4944045 4.17.1.2 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › Asparaginase 0.66 51.0 4.96e-01 84.1% 75.7%
4044269 4.17.1.1 beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N 0.66 49.0 4.76e-01 92.1% 72.9%
5049872 56.2.1.0 beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › CO dehydrogenase accessory protein CooT › CO dehydrogenase accessory protein CooT 0.65 57.0 5.58e-01 100.0% 90.0%
4937731 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 47.0 4.82e-01 77.8% 80.0%
4994895 4.15.1.2 beta barrels › SH3 › TrmB C-terminal domain-like › TrmB C-terminal domain-like › PF31112 0.65 49.0 4.59e-01 84.1% 76.2%
3990001 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.65 50.0 5.40e-01 93.7% 100.0%
3058130 2003.1.2.25 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.64 50.0 4.01e-01 85.7% 89.5%
4218142 4.1.1.101 beta barrels › SH3 › SH3 › SH3 › Tudor_2 0.63 46.0 4.03e-01 88.9% 50.0%
None 0.63 44.0 2.96e-01 73.0% 28.3%
1391704 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.63 49.0 3.91e-01 84.1% 84.9%
4942999 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.63 55.0 3.92e-01 98.4% 86.7%
4861382 5.1.4.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.63 44.0 3.26e-01 73.0% 41.9%
3722079 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.63 54.0 3.36e-01 98.4% 85.1%
3579517 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.63 32.0 3.77e-01 74.6% 70.0%
4983311 2003.1.2.29 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NAD_binding_8 0.63 53.0 3.30e-01 96.8% 64.4%
3728847 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.62 54.0 3.29e-01 98.4% 77.1%
1833392 2003.1.2.16 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3,NAD_binding_8 0.62 51.0 3.83e-01 92.1% 95.6%
3698027 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.62 53.0 3.47e-01 98.4% 70.7%
4389738 2003.1.2.11 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.62 53.0 3.80e-01 98.4% 89.4%
3291190 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.62 52.0 3.49e-01 96.8% 75.5%
3243143 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 48.0 4.78e-01 88.9% 83.1%
3723053 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.61 53.0 3.47e-01 98.4% 70.2%
4033337 302.2.1.0 a+b two layers › Reverse ferredoxin › RuBisCO, small subunit › RuBisCO, small subunit 0.61 54.0 4.42e-01 100.0% 53.9%
4931996 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.61 54.0 4.25e-01 100.0% 49.6%
3187470 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.61 52.0 3.47e-01 96.8% 58.4%
4032637 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.61 47.0 5.00e-01 92.1% 96.4%
3377517 2003.1.2.38 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Lycopene_cycl 0.61 51.0 3.11e-01 96.8% 68.7%
None 0.61 51.0 3.29e-01 98.4% 86.3%
4288670 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.61 51.0 3.26e-01 96.8% 77.4%
2557227 4.7.1.2 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › ROF 0.60 51.0 4.85e-01 100.0% 81.8%
1270539 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.60 51.0 3.79e-01 93.7% 89.2%
4929875 4.11.1.0 beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase 0.59 45.0 3.94e-01 87.3% 53.0%
3926120 4.1.1.169 beta barrels › SH3 › SH3 › SH3 › DUF4819 0.59 52.0 4.00e-01 100.0% 88.3%
4013462 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.59 46.0 3.00e-01 84.1% 63.1%
3715334 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.59 50.0 3.25e-01 96.8% 76.0%
4322502 2003.1.2.15 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 0.59 49.0 3.04e-01 98.4% 79.6%
4988336 1.1.5.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Putative_PNPOx 0.58 51.0 4.00e-01 100.0% 50.4%
4139173 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.57 45.0 3.95e-01 88.9% 87.0%
3802091 4294.1.1.0 few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like 0.57 48.0 3.81e-01 100.0% 87.6%
9252 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.56 45.0 3.65e-01 87.3% 99.1%
4948250 4.1.1.301 beta barrels › SH3 › SH3 › SH3 › MJ1316 0.56 47.0 4.72e-01 98.4% 96.9%
4928472 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.55 37.0 3.44e-01 90.5% 55.0%
3576282 391.1.2.11 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC2L_2nd 0.54 35.0 3.74e-01 74.6% 76.4%
5055783 101.1.2.70 alpha arrays › HTH › HTH › winged helix domain › PqqD 0.54 37.0 3.35e-01 90.5% 51.1%
3768290 391.1.2.11 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC2L_2nd 0.54 36.0 3.72e-01 74.6% 73.3%
4459871 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.53 44.0 4.19e-01 92.1% 90.7%
3830083 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.53 43.0 3.49e-01 95.2% 84.4%
3478898 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 40.0 3.98e-01 87.3% 81.5%
3490245 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 38.0 3.55e-01 85.7% 81.1%
5055413 10.20.1.0 beta sandwiches › jelly-roll › Jelly-roll domain in cysteine protease › Jelly-roll domain in cysteine protease 0.51 46.0 3.62e-01 100.0% 53.1%
4975562 217.1.1.0 a+b complex topology › FAD-binding domain-like › FAD-binding domain › FAD-binding domain 0.51 41.0 2.72e-01 90.5% 29.6%