Back to structures

MT151604.1__QIW88650.1__P59_052__00052

Bact-Vir

MT151604.1__QIW88650.1__P59_052__00052

Identity

Accession:
MT151604 ↗
Kingdom:
phage

Quality

79.2 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 94-241
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF23828.2 best DUF7198 246.6 3.20e-73 100.0% 62.5%
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4bfiB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 29.0 3.68e-01 70.9% 67.8%
2y3uA02 3.30.980.50 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › 0.63 39.0 4.41e-01 77.0% 80.5%
4exkA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.62 32.0 3.74e-01 75.0% 69.2%
4o5lL02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 32.0 3.76e-01 77.7% 73.1%
7zqiA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 28.0 3.55e-01 70.9% 74.4%
1o0vA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 31.0 3.57e-01 77.7% 69.1%
3hlzB01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.56 36.0 3.71e-01 79.1% 67.1%
5h5zA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 28.0 3.41e-01 75.7% 77.3%
2gysA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 28.0 3.42e-01 76.4% 81.1%
1apyB00 3.60.20.30 Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › (Glycosyl)asparaginase 0.52 30.0 3.15e-01 93.2% 58.9%
1in0A02 3.30.70.990 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YajQ-like, domain 2 0.51 27.0 3.27e-01 81.8% 78.3%
2e7jA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.51 27.0 3.01e-01 75.7% 63.4%
3hdiA02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.50 31.0 2.86e-01 71.6% 43.9%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3288000 305.1.1.7 a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › GDH_ACT2 0.68 34.0 4.06e-01 75.0% 70.0%
4069303 304.153.1.1 a+b two layers › Alpha-beta plaits › Collagenase G catalytic helper subdomain › Collagenase G catalytic helper subdomain › ColG_sub 0.63 39.0 4.33e-01 77.0% 75.8%
3341034 304.8.1.57 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT_ACR_D1 0.57 30.0 3.36e-01 75.0% 63.6%
3959629 225.1.1.0 a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 0.57 35.0 4.11e-01 78.4% 86.7%
1916837 11.1.1.68 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ASF1_hist_chap 0.57 31.0 3.67e-01 81.1% 77.3%
5075416 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.56 29.0 3.33e-01 75.0% 65.5%
4070594 304.36.1.1 a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › DUF520 0.55 29.0 3.43e-01 82.4% 72.0%
4025199 306.7.1.0 a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain 0.55 43.0 4.37e-01 82.4% 96.6%
4107510 304.36.1.1 a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › DUF520 0.55 29.0 3.50e-01 83.1% 76.8%
141424 11.1.1.96 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set 0.55 26.0 3.01e-01 72.3% 57.9%
3321864 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.54 28.0 3.21e-01 78.4% 63.6%
5052596 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.54 28.0 3.35e-01 73.6% 73.0%
5065425 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.52 27.0 3.00e-01 75.0% 60.9%
3959606 881.1.1.0 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like 0.51 42.0 4.04e-01 87.2% 93.5%
4157224 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.51 33.0 2.64e-01 87.8% 32.0%
3738706 320.1.1.0 a+b two layers › R3H domain-like › R3H domain › R3H domain 0.50 36.0 3.89e-01 85.1% 90.0%
D2 medium residues 1-59
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF23828.2 best DUF7198 46.9 3.30e-12 98.3% 24.7%