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MT151604.1__QIW88831.1__P59_234__00233

Bact-Vir

MT151604.1__QIW88831.1__P59_234__00233

Identity

Accession:
MT151604 ↗
Kingdom:
phage

Quality

67.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-97
PDB
D2 high residues 100-158
PDB
Domain cluster: representative
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1twfI01 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.71 42.0 4.61e-01 76.3% 73.9%
3po3S02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.67 45.0 4.21e-01 78.0% 55.4%
1qypA00 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.66 44.0 4.51e-01 78.0% 71.9%
7e52A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 36.0 2.86e-01 78.0% 25.8%
1twfI02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.61 47.0 4.37e-01 94.9% 65.8%
1q67A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 44.0 3.32e-01 79.7% 37.1%
4bfeC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 43.0 3.56e-01 79.7% 81.1%
2l6mA00 3.30.160.400 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 42.0 3.58e-01 79.7% 61.4%
1gqeA03 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.58 40.0 3.64e-01 79.7% 53.0%
1a15A00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 35.0 3.43e-01 78.0% 52.2%
6pfzD02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.56 48.0 3.22e-01 100.0% 37.7%
3htxA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.56 39.0 3.70e-01 76.3% 76.3%
2fjlA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 40.0 2.97e-01 78.0% 68.0%
2p4zA00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.55 45.0 3.00e-01 98.3% 72.7%
1ufvA02 3.30.1300.10 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › Pantoate-beta-alanine ligase, C-terminal domain 0.55 38.0 3.25e-01 72.9% 79.8%
4hc5D00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.54 38.0 3.00e-01 84.7% 34.4%
6gp1A00 3.30.1300.40 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › 0.54 40.0 3.96e-01 83.1% 84.6%
3cgbA03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.53 43.0 3.70e-01 100.0% 88.2%
2e9wB05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 38.0 3.41e-01 79.7% 81.3%
4qdgA02 2.60.40.2090 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 39.0 2.98e-01 79.7% 56.3%
1uebA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.51 36.0 3.57e-01 79.7% 71.4%
2rsmA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.51 36.0 2.93e-01 74.6% 40.0%
3ml4C01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 35.0 2.98e-01 74.6% 91.7%
1r0mA01 3.30.390.10 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain 0.51 40.0 3.18e-01 89.8% 91.5%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.50 36.0 3.48e-01 79.7% 66.7%
6zqqA01 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.50 40.0 2.93e-01 93.2% 52.2%
ECOD (51)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4937130 375.1.1.7 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.74 49.0 4.82e-01 78.0% 63.1%
3755722 103.4.1.0 alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein 0.71 47.0 3.35e-01 76.3% 22.9%
4945286 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.69 51.0 5.48e-01 79.7% 94.0%
3445009 103.4.1.0 alpha arrays › RuvA-C › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein › Elongation factor TFIIS domain 2/ Kix domain of creb binding protein 0.69 46.0 3.28e-01 78.0% 22.9%
3309343 375.1.1.7 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.68 46.0 4.71e-01 78.0% 74.5%
5041400 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.68 47.0 5.19e-01 78.0% 95.6%
3598298 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.67 47.0 4.76e-01 76.3% 73.3%
5072764 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.67 49.0 5.26e-01 78.0% 96.0%
4945758 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.67 45.0 4.33e-01 78.0% 60.0%
4576422 375.1.1.84 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zinc_ribbon_15 0.66 48.0 4.59e-01 78.0% 70.0%
4963635 375.1.1.7 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › TFIIS_C 0.65 44.0 4.19e-01 78.0% 59.4%
3739035 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.65 48.0 4.78e-01 78.0% 80.0%
5017692 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 45.0 3.96e-01 81.4% 50.0%
3205743 375.1.1.26 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.61 44.0 3.54e-01 78.0% 42.5%
4982529 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 42.0 4.49e-01 79.7% 88.0%
3688008 7510.1.1.1 a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh 0.60 49.0 3.27e-01 94.9% 39.6%
3958652 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.59 42.0 2.97e-01 76.3% 28.1%
4969099 246.3.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › DNase I-like › DNase I-like › Exo_endo_phos 0.58 50.0 3.25e-01 100.0% 27.8%
4966827 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.58 47.0 3.82e-01 93.2% 90.0%
4962274 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.58 39.0 4.18e-01 76.3% 93.3%
3596523 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.57 42.0 3.72e-01 78.0% 63.5%
3277727 4.8.1.43 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › RNHCP 0.57 41.0 3.59e-01 78.0% 51.6%
1562395 5.1.3.120 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Glyoxal_oxid_N 0.57 39.0 3.11e-01 79.7% 36.6%
3629491 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 35.0 3.59e-01 76.3% 63.6%
3785904 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.57 41.0 4.37e-01 76.3% 94.0%
3995204 295.1.1.4 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › COMM_domain 0.57 39.0 3.83e-01 72.9% 69.2%
4962831 274.1.1.66 a+b two layers › Pili subunits › Pili subunits › Pili subunits › DUF7266 0.56 40.0 3.21e-01 79.7% 37.5%
3264168 376.1.3.22 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › STL11_N 0.56 38.0 2.95e-01 74.6% 31.1%
3248039 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 38.0 3.25e-01 79.7% 43.0%
3315597 252.1.1.0 a+b two layers › DNA-binding domain › Methyl-CpG-binding domain, MBD › Methyl-CpG-binding domain, MBD 0.56 40.0 3.64e-01 76.3% 74.7%
3174350 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.55 40.0 3.90e-01 78.0% 72.3%
3954203 211.1.1.0 a+b two layers › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase › Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 0.55 40.0 3.83e-01 83.1% 81.3%
3378383 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.54 39.0 4.26e-01 78.0% 100.0%
3258377 331.23.1.0 a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain 0.54 42.0 3.72e-01 100.0% 57.8%
3474598 4099.1.1.0 a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.54 42.0 3.59e-01 89.8% 97.1%
3804586 376.1.2.2 few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_2 0.54 40.0 4.15e-01 79.7% 87.3%
4959991 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.53 34.0 3.24e-01 72.9% 52.9%
3592572 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.53 39.0 3.26e-01 79.7% 63.5%
3785552 330.3.1.1 a+b two layers › dsRBD-like › Peptidyl-tRNA hydrolase domain-like › Peptidyl-tRNA hydrolase domain-like › RF-1 0.52 36.0 2.86e-01 74.6% 34.3%
5015724 244.2.1.0 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain 0.52 42.0 3.68e-01 94.9% 79.8%
4026323 2485.1.1.0 a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like 0.52 41.0 3.12e-01 86.4% 77.9%
3939740 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 43.0 3.48e-01 91.5% 91.3%
5048982 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.52 42.0 2.87e-01 91.5% 98.3%
3510700 330.1.1.1 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.52 38.0 3.27e-01 79.7% 70.0%
4012048 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 42.0 2.72e-01 100.0% 43.4%
4963795 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.51 37.0 3.47e-01 78.0% 78.7%
3934686 330.1.1.0 a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.51 35.0 3.12e-01 74.6% 53.7%
3175712 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.51 37.0 2.79e-01 79.7% 57.0%
3618716 4.8.1.2 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_shadow 0.51 31.0 3.17e-01 74.6% 58.3%
4052975 2.1.1.15 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › tRNA_anti-codon 0.51 35.0 2.95e-01 74.6% 50.0%
3553448 376.1.3.22 few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › STL11_N 0.50 38.0 3.40e-01 94.9% 57.6%