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QPL12222.1

Arc-Vir

MT152698__QPL12222.1__HrrHc1-005__00001

Identity

Accession:
MT152698 ↗
Protein ID:
QPL12222.1 ↗
Kingdom:
archaea

Quality

67.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Kirjokansivirales› Graaviviridae› Halorubrum_phage_Hardycor1

TaxID: 2793710

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 53-121
PDB
Domain cluster: rep: KC292028__AGM11790.1__HCTV2-15__00015__D19-74
CATH (74)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3c57B00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.82 52.0 6.02e-01 100.0% 91.8%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.81 50.0 5.52e-01 72.5% 76.8%
5y9sC01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 48.0 4.55e-01 72.5% 52.4%
3p7nA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.79 54.0 5.34e-01 98.6% 68.1%
1rp3G02 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.78 55.0 4.24e-01 100.0% 35.2%
3iuoA00 1.10.10.1390 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › ATP-dependent DNA helicase RecQ 0.78 50.0 4.26e-01 75.4% 41.3%
2dbbB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.76 52.0 5.77e-01 95.7% 89.1%
3t0yA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.75 53.0 5.61e-01 100.0% 85.0%
3vfzB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 55.0 5.77e-01 100.0% 85.7%
5cvrA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 55.0 5.12e-01 78.3% 84.5%
5dukB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 50.0 5.06e-01 76.8% 71.6%
4i2oA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.74 55.0 5.20e-01 78.3% 85.0%
5xsoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.73 50.0 4.87e-01 98.6% 64.5%
1a9xA04 1.10.1030.10 Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain 0.73 49.0 3.75e-01 82.6% 32.0%
2lvsA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 46.0 5.06e-01 76.8% 80.4%
4krdB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.72 63.0 4.51e-01 95.7% 74.7%
2ia0A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.72 49.0 5.34e-01 100.0% 90.7%
1o3sA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 51.0 5.15e-01 75.4% 84.1%
2cfxA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.71 46.0 5.20e-01 73.9% 92.0%
2p5vA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 46.0 5.18e-01 75.4% 90.4%
3c7jA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 52.0 4.80e-01 82.6% 64.8%
2rn7A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 51.0 5.19e-01 78.3% 83.3%
1r71A01 1.10.10.730 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › KorB DNA-binding domain 0.69 51.0 5.59e-01 85.5% 98.2%
2r0qC02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 45.0 4.97e-01 91.3% 85.5%
7pzaA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 56.0 5.18e-01 88.4% 94.2%
2gauA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 50.0 4.79e-01 78.3% 86.4%
1jhgA00 1.10.1270.10 Mainly Alpha › Orthogonal Bundle › Trp Operon Repressor; Chain A › TrpR-like 0.68 47.0 4.13e-01 79.7% 48.5%
2lfwA01 1.20.140.160 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › PhyR, sigma-like (SL) domain 0.68 60.0 4.63e-01 94.2% 85.8%
2xkoA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.68 55.0 4.97e-01 88.4% 73.4%
3zh9B03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.67 48.0 3.91e-01 73.9% 41.3%
1ft9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 48.0 4.62e-01 75.4% 93.7%
2r3sB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 43.0 4.11e-01 75.4% 55.6%
3h4cA02 1.10.472.110 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › 0.67 57.0 4.84e-01 92.8% 85.5%
2x48A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 49.0 5.43e-01 78.3% 98.1%
1lfuP00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 49.0 4.70e-01 79.7% 67.1%
5trdA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 49.0 4.58e-01 78.3% 79.8%
3k9tA03 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 47.0 4.84e-01 97.1% 78.8%
2m8gX00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 42.0 4.22e-01 89.9% 64.3%
1k78A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 48.0 4.88e-01 79.7% 80.3%
3b02A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 49.0 4.55e-01 78.3% 82.4%
1z05A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 49.0 4.85e-01 79.7% 98.6%
5tjjA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.65 49.0 4.89e-01 81.2% 90.4%
2pmiB00 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 56.0 3.96e-01 95.7% 62.0%
3anpB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.65 47.0 3.45e-01 78.3% 28.4%
2w9zA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.65 55.0 4.45e-01 94.2% 77.4%
3f2gA00 3.30.450.410 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.65 47.0 3.40e-01 78.3% 98.5%
1u2wD00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 46.0 4.15e-01 100.0% 55.3%
2o0yB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 48.0 4.92e-01 79.7% 96.9%
3r4kB01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 47.0 4.91e-01 78.3% 100.0%
4ev0A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 47.0 4.60e-01 78.3% 83.1%
1l0oC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 44.0 4.76e-01 71.0% 86.0%
5douA01 1.10.1030.10 Mainly Alpha › Orthogonal Bundle › Carbamoyl Phosphate Synthetase; Chain A, domain 4 › Carbamoyl-phosphate synthetase, large subunit oligomerisation domain 0.64 56.0 4.21e-01 100.0% 39.8%
2dk5A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 47.0 4.83e-01 78.3% 98.5%
4rocA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.63 52.0 4.59e-01 92.8% 90.3%
1aisB02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.63 53.0 4.84e-01 94.2% 94.7%
2ia2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 47.0 4.76e-01 81.2% 92.6%
2xubA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.62 47.0 4.51e-01 97.1% 71.8%
4rgxB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.61 49.0 3.97e-01 88.4% 56.0%
3cdlA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.61 43.0 4.66e-01 73.9% 94.4%
4nb5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.60 49.0 4.61e-01 89.9% 75.3%
4nvsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.60 48.0 3.71e-01 88.4% 53.5%
2gloA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.60 43.0 4.63e-01 79.7% 91.5%
2jrtA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.59 49.0 4.60e-01 97.1% 74.4%
2p0tA02 1.10.60.30 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains 0.59 40.0 3.99e-01 91.3% 68.1%
2dt5B01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 43.0 4.25e-01 78.3% 93.2%
3ni7A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.57 42.0 3.21e-01 79.7% 83.3%
2y30B01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.57 41.0 4.37e-01 78.3% 94.8%
3gwzA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 3.82e-01 78.3% 67.4%
2v79A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 49.0 4.17e-01 98.6% 73.9%
3lstA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 41.0 3.85e-01 78.3% 67.4%
6l25A00 3.20.20.140 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Metal-dependent hydrolases 0.55 49.0 3.32e-01 98.6% 41.6%
3keoA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 38.0 3.84e-01 78.3% 90.3%
1ji7A00 1.10.150.50 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 0.53 39.0 3.77e-01 76.8% 71.4%
2ip2A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 43.0 4.08e-01 95.7% 75.0%
ECOD (84)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4944887 101.1.1.546 ↗ alpha arrays › HTH › HTH › Three-helical HTH › ThiN 0.82 56.0 4.56e-01 79.7% 40.8%
None — 0.81 57.0 3.78e-01 100.0% 20.4%
3284461 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.81 56.0 3.74e-01 100.0% 20.0%
3288971 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.81 56.0 4.27e-01 100.0% 33.3%
4388780 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.80 56.0 4.29e-01 100.0% 34.5%
4238054 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.80 57.0 3.78e-01 100.0% 20.8%
3284984 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.80 56.0 3.68e-01 100.0% 19.7%
5020571 101.1.1.101 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_40 0.79 51.0 4.35e-01 75.4% 42.9%
4663875 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.79 56.0 3.76e-01 100.0% 21.3%
4032673 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.79 56.0 3.74e-01 100.0% 20.8%
4160122 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.79 56.0 4.26e-01 100.0% 34.0%
5030780 101.1.3.0 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like 0.78 52.0 5.92e-01 91.3% 96.0%
3297365 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.77 57.0 4.21e-01 100.0% 32.0%
3826046 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.77 57.0 4.23e-01 100.0% 32.7%
3644937 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.76 57.0 4.26e-01 100.0% 33.8%
4148139 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.76 58.0 4.35e-01 100.0% 35.5%
3978620 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.76 57.0 4.19e-01 100.0% 32.7%
3693312 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.75 51.0 5.48e-01 100.0% 81.7%
3929142 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.75 49.0 5.26e-01 72.5% 76.7%
5026769 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.75 63.0 5.38e-01 92.8% 97.3%
3980765 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.74 57.0 4.20e-01 100.0% 33.9%
4056597 142.1.1.0 ↗ alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors 0.74 57.0 3.60e-01 100.0% 17.8%
4253265 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.74 57.0 4.19e-01 100.0% 33.9%
3347305 101.1.1.30 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3,Sigma70_r4 0.73 56.0 4.16e-01 100.0% 33.9%
5060354 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 48.0 4.97e-01 97.1% 72.3%
5063691 101.1.2.55 ↗ alpha arrays › HTH › HTH › winged helix domain › SMC_ScpB 0.72 51.0 4.74e-01 79.7% 60.0%
4606821 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.72 65.0 5.68e-01 98.6% 68.0%
4281674 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.72 63.0 5.43e-01 95.7% 63.8%
3512795 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.72 62.0 4.66e-01 94.2% 69.4%
4988046 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.72 49.0 5.53e-01 72.5% 98.0%
3944370 101.1.1.318 ↗ alpha arrays › HTH › HTH › Three-helical HTH › PF30335 0.72 58.0 5.87e-01 89.9% 87.1%
5031872 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.71 50.0 5.27e-01 76.8% 83.3%
5058606 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.71 52.0 5.09e-01 97.1% 70.7%
4240426 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.71 60.0 4.38e-01 94.2% 59.8%
5014461 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.71 46.0 5.40e-01 78.3% 100.0%
3280481 101.1.2.6 ↗ alpha arrays › HTH › HTH › winged helix domain › GntR 0.71 50.0 4.92e-01 76.8% 69.3%
4146099 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.71 63.0 5.67e-01 98.6% 71.6%
3962667 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 51.0 5.59e-01 81.2% 96.4%
4980944 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.70 48.0 4.55e-01 94.2% 61.3%
5007486 101.1.1.540 ↗ alpha arrays › HTH › HTH › Three-helical HTH › HTH_10 0.70 54.0 5.31e-01 100.0% 77.3%
3956363 101.1.2.110 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.69 52.0 5.09e-01 79.7% 84.0%
3328518 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.69 58.0 4.28e-01 94.2% 70.3%
4266587 101.1.6.4 ↗ alpha arrays › HTH › HTH › TrpR › Bac_DnaA_C 0.69 61.0 5.49e-01 98.6% 71.6%
3701576 101.1.10.9 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin 0.67 58.0 4.37e-01 95.7% 73.3%
4929094 101.1.2.150 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.67 54.0 4.92e-01 87.0% 78.9%
4498369 101.1.2.135 ↗ alpha arrays › HTH › HTH › winged helix domain › MarR_2 0.67 49.0 4.48e-01 78.3% 78.9%
3597290 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 56.0 4.86e-01 97.1% 77.9%
3534849 101.1.10.7 ↗ alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C 0.66 56.0 4.78e-01 95.7% 87.8%
4367442 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.66 49.0 3.92e-01 79.7% 53.6%
4944631 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.66 53.0 4.49e-01 88.4% 97.4%
4876273 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.66 49.0 4.96e-01 78.3% 79.1%
4954772 101.1.2.141 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_24 0.66 46.0 5.08e-01 97.1% 92.7%
4076621 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.65 43.0 4.94e-01 94.2% 94.0%
4339699 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.65 46.0 5.14e-01 94.2% 94.5%
4131842 101.1.3.25 ↗ alpha arrays › HTH › HTH › tetra-helical, LuxR-like › Sigma70_r3 0.64 48.0 4.73e-01 95.7% 73.3%
3662896 101.1.1.411 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r2 0.64 48.0 3.92e-01 97.1% 44.0%
2439 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.64 44.0 4.76e-01 71.0% 86.0%
2435 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.64 50.0 4.79e-01 100.0% 74.0%
3668668 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.63 48.0 3.89e-01 97.1% 44.0%
4144039 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 49.0 4.14e-01 84.1% 70.4%
5038207 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.63 47.0 3.89e-01 79.7% 50.0%
4086835 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.63 47.0 4.49e-01 100.0% 68.8%
4518420 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.63 47.0 4.82e-01 94.2% 83.1%
3279079 101.1.1.5 ↗ alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.63 46.0 4.46e-01 79.7% 73.8%
3664503 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.62 46.0 4.58e-01 84.1% 77.1%
298007 101.1.2.110 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.62 46.0 4.58e-01 79.7% 86.1%
None — 0.62 46.0 3.58e-01 97.1% 36.7%
4976482 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 45.0 4.68e-01 97.1% 84.6%
5073341 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.61 48.0 4.83e-01 97.1% 84.3%
3948820 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.61 43.0 3.98e-01 94.2% 57.8%
5075696 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 47.0 4.59e-01 97.1% 78.7%
4982117 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.59 51.0 5.01e-01 97.1% 89.3%
4670430 101.1.2.110 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_IclR 0.59 49.0 4.70e-01 91.3% 88.7%
5040366 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.58 42.0 4.49e-01 79.7% 90.0%
4550123 101.1.1.29 ↗ alpha arrays › HTH › HTH › Three-helical HTH › Sigma70_r3 0.58 46.0 4.94e-01 98.6% 98.3%
5073993 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 47.0 4.49e-01 97.1% 77.5%
4971705 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.57 47.0 4.57e-01 97.1% 82.7%
4310740 101.1.2.81 ↗ alpha arrays › HTH › HTH › winged helix domain › Put_DNA-bind_N 0.57 42.0 4.03e-01 79.7% 92.5%
4954922 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.56 50.0 4.37e-01 100.0% 73.3%
4946256 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.55 47.0 4.23e-01 92.8% 91.6%
None — 0.55 40.0 3.96e-01 78.3% 94.7%
3647374 164.1.1.20 ↗ alpha bundles › Chorismate mutase II › Chorismate mutase II › Chorismate mutase II › PF28607 0.55 43.0 4.08e-01 87.0% 97.6%
4978102 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.52 46.0 4.31e-01 100.0% 90.6%
5047836 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.51 43.0 4.24e-01 97.1% 86.7%
D2 high residues 125-164
PDB
Domain cluster: representative
CATH (16)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1o9gA02 1.10.287.540 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.91 71.0 7.00e-01 85.0% 95.3%
1d2mA03 6.10.140.240 Special › Helix non-globular › Helix Hairpins › 0.90 80.0 6.74e-01 100.0% 62.1%
3k59A06 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.90 77.0 7.38e-01 97.5% 83.0%
3ziuA01 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.89 79.0 4.79e-01 100.0% 17.4%
2xkoC02 6.10.250.870 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.88 73.0 7.49e-01 92.5% 100.0%
1yzmA00 4.10.860.20 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain 0.86 73.0 7.08e-01 100.0% 84.8%
2qvaA02 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.86 75.0 6.83e-01 97.5% 75.5%
1z0jB00 4.10.860.20 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › Rabenosyn, Rab binding domain 0.85 73.0 6.80e-01 100.0% 78.4%
4od4A02 1.20.120.1780 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › UbiA prenyltransferase 0.84 71.0 5.00e-01 100.0% 31.9%
2rklF00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.84 74.0 6.77e-01 100.0% 76.9%
6h5hA00 1.10.150.110 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like 0.83 73.0 5.98e-01 97.5% 54.9%
4ar9A02 1.10.390.20 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › 0.81 60.0 4.10e-01 92.5% 23.2%
4u1cA01 4.10.860.10 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain 0.80 67.0 6.24e-01 100.0% 75.0%
4malA00 1.20.58.2200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.80 67.0 5.92e-01 95.0% 64.4%
1hr5A00 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.78 66.0 6.28e-01 100.0% 95.8%
1e52A00 4.10.860.10 Few Secondary Structures › Irregular › DNA Excision Repair, Uvrb; Chain A › UVR domain 0.73 59.0 5.46e-01 100.0% 69.6%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4168739 192.11.1.1 ↗ alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › UVR 0.94 84.0 8.43e-01 97.5% 97.5%
4152566 4274.1.1.1 ↗ extended segments › Transmembrane helices in MalF N-terminal region › Transmembrane helices in MalF N-terminal region › Transmembrane helices in MalF N-terminal region › MalF_N_TM 0.94 85.0 7.54e-01 100.0% 72.7%
3383375 192.11.1.0 ↗ alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB 0.92 73.0 7.70e-01 85.0% 97.1%
4063607 192.17.1.11 ↗ alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like › UVR 0.91 80.0 8.05e-01 97.5% 97.5%
3360337 192.17.1.0 ↗ alpha bundles › Long alpha-hairpin › Rabenosyn-5 Rab-binding domain-like › Rabenosyn-5 Rab-binding domain-like 0.87 76.0 7.66e-01 100.0% 100.0%
3262528 138.1.1.0 ↗ alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain 0.84 74.0 5.87e-01 100.0% 50.0%
4173822 304.1.1.1 ↗ a+b two layers › Alpha-beta plaits › GHMP Kinase, C-terminal domain › GHMP Kinase, C-terminal domain › GHMP_kinases_C 0.83 71.0 4.87e-01 100.0% 27.6%