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MT161385.1__QJI53014.1__XccvBFoX4_gp60c__00060
Bact-VirMT161385.1__QJI53014.1__XccvBFoX4_gp60c__00060
Identity
- Accession:
- MT161385 ↗
- Kingdom:
- phage
Quality
73.3
mean pLDDT
Taxonomy
TaxID: 2723900
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-53
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x6oA02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 44.0 | 3.71e-01 | 81.8% | 39.2% |
| 3frnA01 | 3.10.129.70 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › | 0.63 | 50.0 | 3.63e-01 | 93.2% | 46.8% |
| 5optY00 | 3.30.70.3370 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 49.0 | 3.73e-01 | 95.5% | 34.1% |
| 1ywxA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.62 | 46.0 | 3.93e-01 | 95.5% | 44.6% |
| 1olzA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.61 | 51.0 | 2.95e-01 | 100.0% | 32.6% |
| 1dw9A02 | 3.30.1160.10 | Alpha Beta › 2-Layer Sandwich › Cyanate Lyase; Chain: A, domain 2 › Cyanate lyase, C-terminal domain | 0.58 | 45.0 | 4.08e-01 | 93.2% | 76.5% |
| 3v4rA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.57 | 38.0 | 2.47e-01 | 72.7% | 72.4% |
| 5c82A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.57 | 45.0 | 3.07e-01 | 93.2% | 23.5% |
| 1jyaB00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.56 | 40.0 | 3.01e-01 | 79.5% | 73.6% |
| 4i8oA01 | 3.30.310.240 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Bacterial toxin RNase RnlA/LsoA, N-terminal domain | 0.56 | 39.0 | 3.24e-01 | 100.0% | 38.2% |
| 4xchA00 | 3.30.1360.80 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › S-ribosylhomocysteinase (LuxS) | 0.55 | 38.0 | 2.74e-01 | 95.5% | 22.8% |
| 6le1A01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.53 | 40.0 | 3.71e-01 | 97.7% | 63.2% |
| 1o75A02 | 2.30.30.470 | Mainly Beta › Roll › SH3 type barrels. › Penicillin-binding protein Tp47, domain B | 0.52 | 37.0 | 2.87e-01 | 79.5% | 41.1% |
| 4pcqA02 | 3.30.70.920 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Lrp/AsnC effector binding domain/regulation of amino acid metabolism (RAM) domain | 0.51 | 40.0 | 3.26e-01 | 86.4% | 84.5% |
| 2q3fA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.51 | 37.0 | 2.53e-01 | 81.8% | 25.7% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4024736 | 4.8.1.1 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo | 0.78 | 49.0 | 4.30e-01 | 75.0% | 43.1% |
| 3687002 | 148.1.1.7 ↗ | alpha arrays › Histone-like › Histone-related › Histone › TAF | 0.66 | 45.0 | 3.35e-01 | 72.7% | 58.3% |
| 3862143 | 148.1.1.7 ↗ | alpha arrays › Histone-like › Histone-related › Histone › TAF | 0.64 | 44.0 | 3.28e-01 | 72.7% | 59.1% |
| 3390019 | 304.151.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase › Ferredoxin-like domain of receptor-type protein tyrosine phosphatase | 0.63 | 50.0 | 3.95e-01 | 97.7% | 45.5% |
| 3418854 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.59 | 46.0 | 3.20e-01 | 90.9% | 26.1% |
| 3578001 | 327.18.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › 40S ribosomal protein S7-A › 40S ribosomal protein S7-A › Ribosomal_S7e | 0.59 | 48.0 | 4.28e-01 | 100.0% | 75.7% |
| 3722817 | 206.1.1.11 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › APH | 0.58 | 43.0 | 2.64e-01 | 100.0% | 10.6% |
| 3924518 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.57 | 42.0 | 3.26e-01 | 84.1% | 81.8% |
| 4929756 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.56 | 42.0 | 3.82e-01 | 86.4% | 61.5% |
| 4030369 | 3075.1.1.0 ↗ | a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA | 0.56 | 36.0 | 3.35e-01 | 70.5% | 45.0% |
| 3258903 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.55 | 42.0 | 2.69e-01 | 90.9% | 15.4% |
| 3713136 | 3075.1.1.0 ↗ | a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA | 0.55 | 35.0 | 3.31e-01 | 70.5% | 45.0% |
| 3934642 | 221.4.1.0 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix | 0.55 | 45.0 | 3.18e-01 | 100.0% | 69.4% |
| 5037289 | 3699.1.1.1 ↗ | beta meanders › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermidine synthase tetramerisation domain › Spermine_synt_N | 0.54 | 41.0 | 3.89e-01 | 100.0% | 68.3% |
| 3755026 | 206.1.1.51 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PIP49_C | 0.53 | 40.0 | 2.74e-01 | 90.9% | 20.5% |
| 4965831 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.53 | 44.0 | 3.78e-01 | 100.0% | 88.6% |
| 3656430 | 2.1.1.223 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28721 | 0.53 | 39.0 | 2.73e-01 | 81.8% | 63.6% |
| 4133184 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.52 | 36.0 | 2.54e-01 | 75.0% | 49.0% |
| 5030312 | 1.1.3.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › AbrB | 0.52 | 38.0 | 3.72e-01 | 95.5% | 72.7% |
| 3473115 | 3256.1.1.0 ↗ | a+b two layers › DUF2233 N-terminal domain › DUF2233 N-terminal domain › DUF2233 N-terminal domain | 0.51 | 41.0 | 3.72e-01 | 95.5% | 78.5% |
| 3661604 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.51 | 35.0 | 2.57e-01 | 81.8% | 23.3% |
| 3480021 | 389.1.1.24 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › DL-JAG_EGF-like | 0.51 | 34.0 | 3.46e-01 | 97.7% | 68.9% |
| 3491281 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.50 | 35.0 | 2.53e-01 | 84.1% | 21.2% |