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MT161459.1__QIW86871.1__AHP1_401__00040
Bact-VirMT161459.1__QIW86871.1__AHP1_401__00040
Identity
- Accession:
- MT161459 ↗
- Kingdom:
- phage
Quality
58.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Aeromonas_phage_Ahp1_CNU-2021
TaxID: 2814919
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-198
Domain cluster:
rep: OQ427096.1__WEM34341.1__X__00120__D12-188
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vpzC00 | 1.20.1630.10 | Mainly Alpha › Up-down Bundle › Formate dehydrogenase/DMSO reductase fold › Formate dehydrogenase/DMSO reductase domain | 0.56 | 42.0 | 3.91e-01 | 76.6% | 88.4% |
| 1ehkA00 | 1.20.210.10 | Mainly Alpha › Up-down Bundle › Cytochrome C Oxidase; Chain A › Cytochrome c oxidase-like, subunit I domain | 0.55 | 41.0 | 3.03e-01 | 77.7% | 86.9% |
| 6wbvA01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.53 | 39.0 | 3.08e-01 | 74.6% | 37.1% |
| 1ks8A00 | 1.50.10.10 | Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › | 0.53 | 47.0 | 3.67e-01 | 95.9% | 97.2% |
| 1mhyB00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.53 | 48.0 | 3.89e-01 | 100.0% | 71.3% |
| 4gc0A01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.52 | 37.0 | 3.50e-01 | 73.6% | 71.9% |
| 2wg7A00 | 1.20.90.10 | Mainly Alpha › Up-down Bundle › Phospholipase A2 › Phospholipase A2 domain | 0.52 | 31.0 | 3.68e-01 | 81.2% | 90.9% |
| 3o7pA01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.52 | 37.0 | 3.64e-01 | 73.1% | 78.0% |
| 1pw4A01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.52 | 37.0 | 3.69e-01 | 73.1% | 74.2% |
| 7zh0A01 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.51 | 36.0 | 2.90e-01 | 71.1% | 35.5% |
| 2innB00 | 1.10.620.20 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase, subunit A › Ribonucleotide Reductase, subunit A | 0.51 | 47.0 | 3.51e-01 | 100.0% | 47.9% |
| 5t3wA00 | 1.20.120.1160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.51 | 29.0 | 3.43e-01 | 92.4% | 78.8% |
| 1evyA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.51 | 35.0 | 3.94e-01 | 72.1% | 93.2% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5002372 | 3543.1.1.1 ↗ | alpha complex topology › Acid-activated urea channel › Acid-activated urea channel › Acid-activated urea channel › Gpr1_Fun34_YaaH | 0.57 | 44.0 | 4.56e-01 | 78.7% | 95.0% |
| 5060446 | 4070.1.1.0 ↗ | alpha arrays › FtsH protease domain-like › FtsH protease domain-like › FtsH protease domain-like | 0.55 | 41.0 | 4.08e-01 | 74.6% | 96.0% |
| 3602104 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.55 | 40.0 | 4.04e-01 | 74.6% | 77.0% |
| 3256127 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.54 | 39.0 | 3.56e-01 | 73.1% | 64.2% |
| 4146989 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.54 | 39.0 | 3.60e-01 | 74.6% | 67.3% |
| 3707035 | 5050.1.1.22 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1_like | 0.54 | 38.0 | 3.84e-01 | 73.1% | 72.2% |
| 3618684 | 3236.1.1.1 ↗ | alpha complex topology › Cation-proton antiporter › Cation-proton antiporter (CPA) › Cation-proton antiporter (CPA) › Na_H_Exchanger | 0.52 | 46.0 | 3.65e-01 | 95.9% | 80.3% |
| 3947762 | 191.1.1.29 ↗ | alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › TetR_C_27 | 0.50 | 36.0 | 4.03e-01 | 72.6% | 97.3% |
D2
high
residues 936-1115
Domain cluster:
rep: pre3_saliva_scaffold_7_prodigal-single.1__X__X__00207__D143-323
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00644.27 best | PARP | 28.4 | 1.50e-06 | 60.6% | 45.2% |
D3
high
residues 1124-1212
Domain cluster:
rep: LC121084.1__BAU40085.1__X__00127__D1295-1371
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2z7rA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.65 | 38.0 | 3.99e-01 | 73.0% | 61.9% |
| 1yxsA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 41.0 | 4.09e-01 | 70.8% | 95.7% |
| 1zysA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.59 | 41.0 | 4.08e-01 | 73.0% | 90.5% |
| 1mw7A03 | 3.30.70.980 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › YebC, transcriptional regulation domain | 0.59 | 38.0 | 4.11e-01 | 86.5% | 78.7% |
| 2bujB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 39.0 | 3.90e-01 | 70.8% | 85.1% |
| 1ayoA00 | 2.60.40.690 | Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain | 0.58 | 40.0 | 3.50e-01 | 71.9% | 67.7% |
| 1z9mA00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 44.0 | 4.20e-01 | 82.0% | 79.8% |
| 2cpdA01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.57 | 37.0 | 3.96e-01 | 79.8% | 77.3% |
| 3zduA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 35.0 | 3.73e-01 | 71.9% | 71.1% |
| 2weiA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 38.0 | 3.87e-01 | 71.9% | 68.9% |
| 3cu7A12 | 2.60.40.690 | Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain | 0.56 | 39.0 | 3.34e-01 | 71.9% | 67.4% |
| 4af3A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.56 | 37.0 | 3.80e-01 | 70.8% | 69.3% |
| 5jpnC01 | 2.60.40.690 | Mainly Beta › Sandwich › Immunoglobulin-like › Alpha-macroglobulin, receptor-binding domain | 0.55 | 39.0 | 3.42e-01 | 73.0% | 69.9% |
| 1ah1A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 41.0 | 3.67e-01 | 79.8% | 76.0% |
| 1s9iB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 38.0 | 3.80e-01 | 71.9% | 94.6% |
| 3dlsB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 38.0 | 3.70e-01 | 71.9% | 83.7% |
| 2clqA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 37.0 | 3.82e-01 | 70.8% | 98.8% |
| 4uzgA01 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 38.0 | 3.14e-01 | 73.0% | 78.8% |
| 4p0dA02 | 2.60.40.740 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 37.0 | 3.10e-01 | 74.2% | 74.7% |
| 2lcjA00 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.52 | 36.0 | 2.93e-01 | 71.9% | 98.9% |
| 5i4nA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.52 | 36.0 | 3.57e-01 | 70.8% | 68.5% |
| 2fphX02 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.52 | 41.0 | 4.14e-01 | 85.4% | 88.6% |
| 5xctB01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.52 | 39.0 | 3.69e-01 | 82.0% | 83.0% |
| 4ei0A01 | 2.60.40.3550 | Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4466 | 0.52 | 36.0 | 3.10e-01 | 71.9% | 68.8% |
| 3nynA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.51 | 39.0 | 3.34e-01 | 82.0% | 68.7% |
| 3nynB01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.50 | 38.0 | 2.78e-01 | 82.0% | 64.3% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5014446 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.71 | 36.0 | 3.20e-01 | 86.5% | 35.8% |
| 3946828 | 304.11.1.0 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase | 0.66 | 38.0 | 4.37e-01 | 85.4% | 78.5% |
| 4937175 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.66 | 37.0 | 4.23e-01 | 85.4% | 75.4% |
| 4941380 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.65 | 36.0 | 4.48e-01 | 96.6% | 94.0% |
| 4950570 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.64 | 35.0 | 3.99e-01 | 88.8% | 70.8% |
| 5023503 | 304.110.1.0 ↗ | a+b two layers › Alpha-beta plaits › Acylphosphatase-like › Acylphosphatase-like | 0.63 | 37.0 | 4.14e-01 | 86.5% | 74.3% |
| 4940504 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.62 | 36.0 | 4.20e-01 | 86.5% | 83.3% |
| 5000854 | 309.1.2.2 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › tRNA_bind_4 | 0.61 | 38.0 | 3.11e-01 | 85.4% | 35.5% |
| 4402752 | 309.1.2.2 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › tRNA_bind_4 | 0.58 | 38.0 | 3.07e-01 | 87.6% | 36.9% |
| 1789283 | 11.1.5.27 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › A2M_recep | 0.55 | 39.0 | 3.25e-01 | 71.9% | 62.8% |
| 2806794 | 11.1.5.27 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › A2M_recep | 0.55 | 39.0 | 3.40e-01 | 73.0% | 68.4% |
| 3572284 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.55 | 43.0 | 4.18e-01 | 84.3% | 84.0% |
| 4670240 | 11.1.1.88 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM9_1 | 0.54 | 42.0 | 3.38e-01 | 83.1% | 90.9% |
| 3785450 | 304.9.1.103 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › PF26763 | 0.54 | 38.0 | 3.85e-01 | 74.2% | 81.1% |
| 5044711 | 304.3.1.0 ↗ | a+b two layers › Alpha-beta plaits › HMA-related › HMA, heavy metal-associated domain | 0.54 | 36.0 | 3.84e-01 | 88.8% | 81.3% |
| 3217201 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 40.0 | 3.64e-01 | 80.9% | 81.7% |
| 3797805 | 11.1.1.842 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CUT_C | 0.52 | 39.0 | 3.54e-01 | 79.8% | 65.0% |
| 3189495 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.52 | 37.0 | 3.49e-01 | 74.2% | 83.8% |
| 3886296 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.51 | 38.0 | 3.63e-01 | 80.9% | 73.6% |
| 5067689 | 309.1.2.2 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › tRNA_bind_4 | 0.51 | 38.0 | 3.16e-01 | 79.8% | 91.3% |
| 4974674 | 309.1.2.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain | 0.51 | 39.0 | 3.24e-01 | 83.1% | 91.9% |
| 4947796 | 309.1.2.2 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › ThrRS/AlaRS editing domain › tRNA_bind_4 | 0.50 | 37.0 | 2.98e-01 | 77.5% | 82.3% |
| 4961375 | 304.165.1.0 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 | 0.50 | 38.0 | 3.35e-01 | 84.3% | 53.3% |
| 4025487 | 11.8.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Osmotin-like › Osmotin-like | 0.50 | 35.0 | 3.20e-01 | 73.0% | 100.0% |
| 3542635 | 1.1.7.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › tRNA-synt_2c | 0.50 | 37.0 | 3.26e-01 | 78.7% | 83.7% |
D4
medium
residues 347-442
D5
medium
residues 443-548
D6
medium
residues 549-700
D7
medium
residues 701-910