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MT162466.1__QIN96751.1__X__00116

Bact-Vir

MT162466.1__QIN96751.1__X__00116

Identity

Accession:
MT162466 ↗
Kingdom:
phage

Quality

84.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Kyanoviridae› Huanghaivirus› Synechococcus_phage_S-N03

TaxID: 2718943

Cluster

View cluster (51 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-91
PDB
Domain cluster: rep: IMGVR_UViG_3300032006_002050-3300032006-Ga0310344_100038483__D2-86
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3by7E00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.98 80.0 8.80e-01 98.9% 100.0%
4m7dA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.89 55.0 6.47e-01 86.7% 87.7%
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.82 53.0 6.07e-01 88.9% 88.2%
5mkiH00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.82 50.0 5.61e-01 85.6% 78.9%
4m78N00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.81 49.0 5.49e-01 87.8% 77.5%
1b34B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.81 50.0 5.52e-01 90.0% 77.0%
4c92A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.78 60.0 5.27e-01 94.4% 56.2%
4emhA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.78 50.0 6.03e-01 85.6% 98.3%
1d3bC00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.76 49.0 5.46e-01 86.7% 83.1%
3jb9F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.75 49.0 5.17e-01 87.8% 73.2%
6v4xC01 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.74 48.0 4.69e-01 87.8% 60.0%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 44.0 5.37e-01 92.2% 96.6%
1y96A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 46.0 4.69e-01 96.7% 70.9%
1d3bB00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.67 51.0 5.42e-01 96.7% 90.1%
2e12A00 2.30.30.720 Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) 0.66 46.0 4.58e-01 92.2% 69.9%
2gu3A02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 29.0 3.40e-01 85.6% 58.7%
1tg0A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 39.0 4.45e-01 85.6% 95.5%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.56 30.0 3.04e-01 86.7% 50.0%
4jglA00 2.40.128.530 Mainly Beta › Beta Barrel › Lipocalin › 0.55 48.0 4.13e-01 100.0% 77.6%
4zg5A00 3.40.1210.10 Alpha Beta › 3-Layer(aba) Sandwich › Stationary-phase Survival Protein Sure Homolog; Chain: A, › Survival protein SurE-like phosphatase/nucleotidase 0.52 38.0 2.88e-01 78.9% 57.9%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4813032 4.1.1.328 ↗ beta barrels › SH3 › SH3 › SH3 › Sm_like 0.95 78.0 8.34e-01 100.0% 96.2%
4029154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.80 59.0 5.28e-01 93.3% 58.0%
4030011 4.1.1.89 ↗ beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.76 54.0 5.48e-01 85.6% 74.4%
3482844 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 56.0 5.81e-01 96.7% 87.1%
3922676 4.1.1.89 ↗ beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.72 56.0 5.41e-01 88.9% 74.0%
3254881 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 49.0 5.33e-01 84.4% 84.0%
3948209 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.71 45.0 4.89e-01 92.2% 77.3%
3699819 4.1.1.89 ↗ beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.68 52.0 5.17e-01 87.8% 75.8%
5048974 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 45.0 4.20e-01 88.9% 56.4%
3187241 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.66 54.0 5.08e-01 88.9% 77.3%
3741267 207.1.1.454 ↗ beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › DIPSY 0.64 35.0 4.44e-01 100.0% 96.0%
3704922 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 41.0 2.69e-01 81.1% 16.5%
3631165 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 42.0 4.36e-01 87.8% 77.6%
3231154 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 42.0 4.40e-01 98.9% 82.5%
3614413 4.1.1.89 ↗ beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.59 54.0 4.82e-01 100.0% 87.2%
4128405 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.58 32.0 3.58e-01 91.1% 68.6%
4204303 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.58 32.0 3.28e-01 91.1% 53.3%
5064404 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.57 30.0 3.53e-01 86.7% 73.3%
3502214 7026.1.1.0 ↗ beta meanders › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 › N-terminal region of lipid transporter Vps13 0.56 40.0 3.15e-01 76.7% 39.4%
3828823 3324.1.1.2 ↗ extended segments › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases 0.53 47.0 3.43e-01 100.0% 43.0%
3800269 2003.1.2.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.53 40.0 3.44e-01 81.1% 98.0%
4245518 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.53 31.0 3.34e-01 92.2% 66.7%
4982958 4.6.1.2 ↗ beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC 0.53 43.0 4.16e-01 100.0% 81.0%
5068554 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 37.0 3.41e-01 73.3% 90.0%
3365658 3324.1.1.1 ↗ extended segments › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › Helical arch in Ski2-like helicases › MTR4_beta-barrel 0.53 47.0 3.44e-01 100.0% 46.5%
3422852 4.1.1.85 ↗ beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel 0.53 47.0 4.22e-01 100.0% 87.2%
4025866 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.51 46.0 3.09e-01 98.9% 95.9%
4134015 101.1.8.1 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.51 39.0 3.37e-01 84.4% 71.6%
3256145 9.15.1.1 ↗ beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD 0.51 40.0 3.32e-01 86.7% 69.1%
4060488 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.51 30.0 3.13e-01 92.2% 61.3%