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MT162468.2__QIN97179.1__X__00058
Bact-VirMT162468.2__QIN97179.1__X__00058
Identity
- Accession:
- MT162468 ↗
- Kingdom:
- phage
Quality
83.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Kyanoviridae›
Tefnutvirus›
Synechococcus_phage_S-H25
TaxID: 2718941
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 16-71
Domain cluster:
rep: NC_047717.1__YP_009779476.1__HOQ66_gp169__00063__D13-63
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2jn4A00 | 2.40.50.240 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › NifT/FixU-like | 0.59 | 35.0 | 3.35e-01 | 83.9% | 50.0% |
| 4fvdA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.55 | 42.0 | 3.65e-01 | 87.5% | 53.2% |
| 2xfmA00 | 2.170.260.10 | Mainly Beta › Beta Complex › paz domain › paz domain | 0.54 | 43.0 | 3.59e-01 | 100.0% | 71.7% |
| 2x5cA01 | 3.30.70.3590 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.54 | 39.0 | 3.41e-01 | 100.0% | 49.5% |
| 3etcA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.50 | 39.0 | 2.47e-01 | 100.0% | 68.2% |
| 4ie5A01 | 2.60.120.590 | Mainly Beta › Sandwich › Jelly Rolls › Alpha-ketoglutarate-dependent dioxygenase AlkB-like | 0.50 | 41.0 | 2.78e-01 | 100.0% | 89.0% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3598222 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 41.0 | 3.92e-01 | 100.0% | 61.4% |
| 3664364 | 145.1.1.3 ↗ | alpha arrays › F-box domain › F-box domain › F-box domain › F-box-like | 0.56 | 40.0 | 3.98e-01 | 100.0% | 73.3% |
| 4283963 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.55 | 37.0 | 2.79e-01 | 71.4% | 90.9% |
| 3463102 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 45.0 | 3.34e-01 | 100.0% | 74.2% |
| 3479534 | 304.48.1.1 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 | 0.51 | 40.0 | 2.45e-01 | 92.9% | 59.0% |
| 3254588 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.51 | 38.0 | 2.42e-01 | 87.5% | 71.2% |
| 3599479 | 3910.1.1.1 ↗ | extended segments › Exosome complex exonuclease RRP6 N-terminal domain › Exosome complex exonuclease RRP6 N-terminal domain › Exosome complex exonuclease RRP6 N-terminal domain › PMC2NT | 0.50 | 36.0 | 2.99e-01 | 76.8% | 49.0% |