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MT162468.2__QIN97193.1__X__00043

Bact-Vir

MT162468.2__QIN97193.1__X__00043

Identity

Accession:
MT162468 ↗
Kingdom:
phage

Quality

93.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 2-48
PDB
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6rjiA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.65 52.0 5.02e-01 87.2% 94.2%
4j3vA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 40.0 3.33e-01 97.9% 67.6%
ECOD (3)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3327078 210.2.1.0 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain 0.62 51.0 3.26e-01 95.7% 34.1%
3233246 210.2.1.1 a+b four layers › Ntn/PP2C › Protein serine/threonine phosphatase 2C, catalytic domain › Protein serine/threonine phosphatase 2C, catalytic domain › PP2C 0.58 46.0 3.02e-01 100.0% 36.3%
3452581 4277.1.1.0 0.50 37.0 3.72e-01 87.2% 96.0%
D2 medium residues 57-97
PDB
CATH (10)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3htmA02 6.10.250.3030 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.63 42.0 4.28e-01 70.7% 70.0%
2mgwA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.62 41.0 3.85e-01 80.5% 53.8%
2xsaA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.61 49.0 2.95e-01 87.8% 24.5%
4ar9A02 1.10.390.20 Mainly Alpha › Orthogonal Bundle › Neutral Protease; domain 2 › 0.58 41.0 2.95e-01 78.0% 24.6%
2osaA00 1.10.555.10 Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase; Chain A › Rho GTPase activation protein 0.58 42.0 2.89e-01 90.2% 81.1%
1chuA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 43.0 2.71e-01 85.4% 17.3%
6z0pB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 48.0 2.96e-01 95.1% 93.2%
4dqkA02 1.20.990.10 Mainly Alpha › Up-down Bundle › NADPH-cytochrome p450 Reductase; Chain A, domain 3 › NADPH-cytochrome p450 Reductase; Chain A, domain 3 0.54 40.0 3.04e-01 87.8% 100.0%
2b5uA02 1.10.287.620 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins 0.54 42.0 2.97e-01 95.1% 50.9%
1tfeA02 1.10.286.20 Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › 0.51 41.0 4.02e-01 92.7% 93.3%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3259038 189.1.1.2 alpha bundles › GTPase activation domain, GAP › GTPase activation domain, GAP › GTPase activation domain, GAP › RhoGAP 0.61 47.0 3.12e-01 95.1% 39.5%
3340749 309.1.1.11 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › PqqF-like_C_4 0.60 44.0 2.80e-01 87.8% 14.0%
3249028 148.1.3.0 alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain 0.59 46.0 4.23e-01 90.2% 65.5%
4351255 191.1.1.91 alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › PF29842 0.55 41.0 3.45e-01 95.1% 47.8%